RNA–Protein interactions for RNA: ENST00000452448.6

EPHA3-202, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-202ENST00000452448 HNRNPA1P09651 372 aaKnown RBP eCLIP4.84□□□□□ -1.63
EPHA3-202ENST00000452448 STAG3L2P0CL84 134 aa4.84□□□□□ -1.63
EPHA3-202ENST00000452448 PRR23D2P0DMB1 279 aaPredicted RBP4.84□□□□□ -1.63
EPHA3-202ENST00000452448 NQO2P16083 231 aa4.84□□□□□ -1.63
EPHA3-202ENST00000452448 MSX2P35548 267 aaPredicted RBP4.84□□□□□ -1.63
EPHA3-202ENST00000452448 SERPINF1P36955 418 aa4.84□□□□□ -1.63
EPHA3-202ENST00000452448 CAPZBP47756 277 aa4.84□□□□□ -1.63
EPHA3-202ENST00000452448 GRIA4P48058 902 aa4.84□□□□□ -1.63
EPHA3-202ENST00000452448 CDK8P49336 464 aa4.84□□□□□ -1.63
EPHA3-202ENST00000452448 CLCN7P51798 805 aa4.84□□□□□ -1.63
EPHA3-202ENST00000452448 CABP4P57796 275 aa4.84□□□□□ -1.63
EPHA3-202ENST00000452448 HERVK_113P63132 956 aa4.84□□□□□ -1.63
EPHA3-202ENST00000452448 BNC1Q01954 994 aa4.84□□□□□ -1.63
EPHA3-202ENST00000452448 PTH1RQ03431 593 aa4.84□□□□□ -1.63
EPHA3-202ENST00000452448 LRRC63Q05C16 580 aa4.84□□□□□ -1.63
EPHA3-202ENST00000452448 GRK1Q15835 563 aa4.84□□□□□ -1.63
EPHA3-202ENST00000452448 HNRNPA1L2Q32P51 320 aaKnown RBP4.84□□□□□ -1.63
EPHA3-202ENST00000452448 TAF1BQ53T94 588 aaPredicted RBP4.84□□□□□ -1.63
EPHA3-202ENST00000452448 FAXCQ5TGI0 409 aa4.84□□□□□ -1.63
EPHA3-202ENST00000452448 OVOS1Q6IE37 1185 aa4.84□□□□□ -1.63
EPHA3-202ENST00000452448 ACAD10Q6JQN1 1059 aa4.84□□□□□ -1.63
EPHA3-202ENST00000452448 LRFN4Q6PJG9 635 aa4.84□□□□□ -1.63
EPHA3-202ENST00000452448 TMEM270Q6UE05 265 aa4.84□□□□□ -1.63
EPHA3-202ENST00000452448 SCIMPQ6UWF3 145 aa4.84□□□□□ -1.63
EPHA3-202ENST00000452448 CES3Q6UWW8 571 aa4.84□□□□□ -1.63
EPHA3-202ENST00000452448 MFSD7Q6UXD7 560 aa4.84□□□□□ -1.63
EPHA3-202ENST00000452448 PLPPR4Q7Z2D5 763 aa4.84□□□□□ -1.63
EPHA3-202ENST00000452448 SCML4Q8N228 414 aa4.84□□□□□ -1.63
EPHA3-202ENST00000452448 RNF152Q8N8N0 203 aa4.84□□□□□ -1.63
EPHA3-202ENST00000452448 GPR150Q8NGU9 434 aa4.84□□□□□ -1.63
EPHA3-202ENST00000452448 PSMA8Q8TAA3 256 aa4.84□□□□□ -1.63
EPHA3-202ENST00000452448 NDNFQ8TB73 568 aa4.84□□□□□ -1.63
EPHA3-202ENST00000452448 KCNE4Q8WWG9 221 aa4.84□□□□□ -1.63
EPHA3-202ENST00000452448 AUTS2Q8WXX7 1259 aa4.84□□□□□ -1.63
EPHA3-202ENST00000452448 SNAPC3Q92966 411 aa4.84□□□□□ -1.63
EPHA3-202ENST00000452448 TMEM143Q96AN5 459 aa4.84□□□□□ -1.63
EPHA3-202ENST00000452448 FBXL8Q96CD0 374 aa4.84□□□□□ -1.63
EPHA3-202ENST00000452448 ZHX1-C8orf76Q96EF9 292 aa4.84□□□□□ -1.63
EPHA3-202ENST00000452448 C14orf144Q96I85 54 aa4.84□□□□□ -1.63
EPHA3-202ENST00000452448 MEGF10Q96KG7 1140 aa4.84□□□□□ -1.63
EPHA3-202ENST00000452448 KLF6Q99612 283 aaPredicted RBP4.84□□□□□ -1.63
EPHA3-202ENST00000452448 NPAS1Q99742 590 aa4.84□□□□□ -1.63
EPHA3-202ENST00000452448 ITPAQ9BY32 194 aa4.84□□□□□ -1.63
EPHA3-202ENST00000452448 NMUR2Q9GZQ4 415 aa4.84□□□□□ -1.63
EPHA3-202ENST00000452448 ILKAPQ9H0C8 392 aaPredicted RBP4.84□□□□□ -1.63
EPHA3-202ENST00000452448 RNF208Q9H0X6 261 aa4.84□□□□□ -1.63
EPHA3-202ENST00000452448 SEMA6CQ9H3T2 930 aa4.84□□□□□ -1.63
EPHA3-202ENST00000452448 DPEP2Q9H4A9 486 aa4.84□□□□□ -1.63
EPHA3-202ENST00000452448 WDR55Q9H6Y2 383 aaPredicted RBP4.84□□□□□ -1.63
EPHA3-202ENST00000452448 C17orf75Q9HAS0 396 aa4.84□□□□□ -1.63
EPHA3-202ENST00000452448 ABCB9Q9NP78 766 aa4.84□□□□□ -1.63
EPHA3-202ENST00000452448 NGBQ9NPG2 151 aa4.84□□□□□ -1.63
EPHA3-202ENST00000452448 BIN3Q9NQY0 253 aa4.84□□□□□ -1.63
EPHA3-202ENST00000452448 PNO1Q9NRX1 252 aaKnown RBP4.84□□□□□ -1.63
EPHA3-202ENST00000452448 MS4A12Q9NXJ0 267 aa4.84□□□□□ -1.63
EPHA3-202ENST00000452448 CCDC59Q9P031 241 aaKnown RBP4.84□□□□□ -1.63
EPHA3-202ENST00000452448 VAPAQ9P0L0 249 aa4.84□□□□□ -1.63
EPHA3-202ENST00000452448 SH3BP4Q9P0V3 963 aa4.84□□□□□ -1.63
EPHA3-202ENST00000452448 GUCA1BQ9UMX6 200 aa4.84□□□□□ -1.63
EPHA3-202ENST00000452448 CDC14AQ9UNH5 594 aa4.84□□□□□ -1.63
EPHA3-202ENST00000452448 KCNJ14Q9UNX9 436 aa4.84□□□□□ -1.63
EPHA3-202ENST00000452448 SLC5A6Q9Y289 635 aa4.84□□□□□ -1.63
EPHA3-202ENST00000452448 ZNF281Q9Y2X9 895 aa4.84□□□□□ -1.63
EPHA3-202ENST00000452448 MRC1P22897 1456 aa4.84□□□□□ -1.63
EPHA3-202ENST00000452448 MEIS3P2A8K0S8 358 aa4.84□□□□□ -1.64
EPHA3-202ENST00000452448 GABRR3A8MPY1 467 aa4.84□□□□□ -1.64
EPHA3-202ENST00000452448 H0Y8G0 127 aa4.84□□□□□ -1.64
EPHA3-202ENST00000452448 H3BMM5 538 aa4.84□□□□□ -1.64
EPHA3-202ENST00000452448 C2CD2LO14523 706 aa4.84□□□□□ -1.64
EPHA3-202ENST00000452448 MEIS2O14770 477 aa4.84□□□□□ -1.64
EPHA3-202ENST00000452448 DNAJA2O60884 412 aa4.84□□□□□ -1.64
EPHA3-202ENST00000452448 CTNSO60931 367 aa4.84□□□□□ -1.64
EPHA3-202ENST00000452448 DLGAP3O95886 979 aa4.84□□□□□ -1.64
EPHA3-202ENST00000452448 MOCS2O96007 188 aaPredicted RBP4.84□□□□□ -1.64
EPHA3-202ENST00000452448 EPHX1P07099 455 aa4.84□□□□□ -1.64
EPHA3-202ENST00000452448 LINC00614P0C842 121 aa4.84□□□□□ -1.64
EPHA3-202ENST00000452448 CYP2C8P10632 490 aa4.84□□□□□ -1.64
EPHA3-202ENST00000452448 ETS1P14921 441 aa4.84□□□□□ -1.64
EPHA3-202ENST00000452448 FPR3P25089 353 aa4.84□□□□□ -1.64
EPHA3-202ENST00000452448 HSD11B1P28845 292 aa4.84□□□□□ -1.64
EPHA3-202ENST00000452448 MC5RP33032 325 aa4.84□□□□□ -1.64
EPHA3-202ENST00000452448 EIF2DP41214 584 aaKnown RBP4.84□□□□□ -1.64
EPHA3-202ENST00000452448 MLLT10P55197 1068 aa4.84□□□□□ -1.64
EPHA3-202ENST00000452448 PRMT2P55345 433 aa4.84□□□□□ -1.64
EPHA3-202ENST00000452448 ESRRGP62508 458 aa4.84□□□□□ -1.64
EPHA3-202ENST00000452448 CNTN2Q02246 1040 aa4.84□□□□□ -1.64
EPHA3-202ENST00000452448 NHLH1Q02575 133 aa4.84□□□□□ -1.64
EPHA3-202ENST00000452448 ST3GAL1Q11201 340 aa4.84□□□□□ -1.64
EPHA3-202ENST00000452448 DNASE1L3Q13609 305 aa4.84□□□□□ -1.64
EPHA3-202ENST00000452448 SYT16Q17RD7 645 aa4.84□□□□□ -1.64
EPHA3-202ENST00000452448 ZRANB3Q5FWF4 1079 aa4.84□□□□□ -1.64
EPHA3-202ENST00000452448 LRRC38Q5VT99 294 aa4.84□□□□□ -1.64
EPHA3-202ENST00000452448 MFSD14CQ5VZR4 134 aa4.84□□□□□ -1.64
EPHA3-202ENST00000452448 EMBQ6PCB8 327 aa4.84□□□□□ -1.64
EPHA3-202ENST00000452448 USP53Q70EK8 1073 aa4.84□□□□□ -1.64
EPHA3-202ENST00000452448 OTOP1Q7RTM1 612 aa4.84□□□□□ -1.64
EPHA3-202ENST00000452448 BHLHA15Q7RTS1 189 aaPredicted RBP4.84□□□□□ -1.64
EPHA3-202ENST00000452448 TRAPPC11Q7Z392 1133 aa4.84□□□□□ -1.64
EPHA3-202ENST00000452448 PI4KAP1Q8N8J0 262 aa4.84□□□□□ -1.64
EPHA3-202ENST00000452448 TDRD5Q8NAT2 981 aaKnown RBP4.84□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms