RNA–Protein interactions for RNA: ENST00000434734.1

HMGB3P10-201, Transcript of high mobility group box 3 pseudogene 10, humanhuman

BASIC

Gene HMGB3P10, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P10-201ENST00000434734 C12orf66Q96MD2 445 aa5.07□□□□□ -1.6
HMGB3P10-201ENST00000434734 SFXN2Q96NB2 322 aa5.07□□□□□ -1.6
HMGB3P10-201ENST00000434734 RPRD1AQ96P16 312 aaPredicted RBP5.07□□□□□ -1.6
HMGB3P10-201ENST00000434734 CATSPER2Q96P56 530 aa5.07□□□□□ -1.6
HMGB3P10-201ENST00000434734 OR6C1Q96RD1 312 aa5.07□□□□□ -1.6
HMGB3P10-201ENST00000434734 PANX2Q96RD6 677 aa5.07□□□□□ -1.6
HMGB3P10-201ENST00000434734 RAB40CQ96S21 281 aa5.07□□□□□ -1.6
HMGB3P10-201ENST00000434734 NPY6RQ99463 290 aa5.07□□□□□ -1.6
HMGB3P10-201ENST00000434734 NPAS2Q99743 824 aa5.07□□□□□ -1.6
HMGB3P10-201ENST00000434734 BPIFA3Q9BQP9 254 aa5.07□□□□□ -1.6
HMGB3P10-201ENST00000434734 NTMT1Q9BV86 223 aa5.07□□□□□ -1.6
HMGB3P10-201ENST00000434734 PINK1Q9BXM7 581 aa5.07□□□□□ -1.6
HMGB3P10-201ENST00000434734 PKIBQ9C010 78 aa5.07□□□□□ -1.6
HMGB3P10-201ENST00000434734 NACA2Q9H009 215 aa5.07□□□□□ -1.6
HMGB3P10-201ENST00000434734 CATSPERBQ9H7T0 1116 aa5.07□□□□□ -1.6
HMGB3P10-201ENST00000434734 WDR76Q9H967 626 aa5.07□□□□□ -1.6
HMGB3P10-201ENST00000434734 MMP25Q9NPA2 562 aa5.07□□□□□ -1.6
HMGB3P10-201ENST00000434734 FAM120CQ9NX05 1096 aaKnown RBP5.07□□□□□ -1.6
HMGB3P10-201ENST00000434734 QPCTLQ9NXS2 382 aa5.07□□□□□ -1.6
HMGB3P10-201ENST00000434734 DPP3Q9NY33 737 aa5.07□□□□□ -1.6
HMGB3P10-201ENST00000434734 SEMA5BQ9P283 1151 aa5.07□□□□□ -1.6
HMGB3P10-201ENST00000434734 COPS7AQ9UBW8 275 aa5.07□□□□□ -1.6
HMGB3P10-201ENST00000434734 SLC9A2Q9UBY0 812 aa5.07□□□□□ -1.6
HMGB3P10-201ENST00000434734 PLEKHB1Q9UF11 243 aaPredicted RBP5.07□□□□□ -1.6
HMGB3P10-201ENST00000434734 KCNE5Q9UJ90 142 aa5.07□□□□□ -1.6
HMGB3P10-201ENST00000434734 ADAM29Q9UKF5 820 aa5.07□□□□□ -1.6
HMGB3P10-201ENST00000434734 AMFRQ9UKV5 643 aa5.07□□□□□ -1.6
HMGB3P10-201ENST00000434734 FZD10Q9ULW2 581 aa5.07□□□□□ -1.6
HMGB3P10-201ENST00000434734 TNNQ9UQP3 1299 aa5.07□□□□□ -1.6
HMGB3P10-201ENST00000434734 MST1RQ04912 1400 aa5.06□□□□□ -1.6
HMGB3P10-201ENST00000434734 PFASO15067 1338 aa5.06□□□□□ -1.6
HMGB3P10-201ENST00000434734 KIF7Q2M1P5 1343 aa5.06□□□□□ -1.6
HMGB3P10-201ENST00000434734 LOC100506127A0A0U1RQW1 187 aa5.06□□□□□ -1.6
HMGB3P10-201ENST00000434734 TTC26A0AVF1 554 aa5.06□□□□□ -1.6
HMGB3P10-201ENST00000434734 TMEM202A6NGA9 273 aa5.06□□□□□ -1.6
HMGB3P10-201ENST00000434734 ANKRD30BLA7E2S9 258 aa5.06□□□□□ -1.6
HMGB3P10-201ENST00000434734 A8MUI8 341 aa5.06□□□□□ -1.6
HMGB3P10-201ENST00000434734 ABLIM1O14639 778 aa5.06□□□□□ -1.6
HMGB3P10-201ENST00000434734 KLF11O14901 512 aa5.06□□□□□ -1.6
HMGB3P10-201ENST00000434734 SSX4O60224 188 aa5.06□□□□□ -1.6
HMGB3P10-201ENST00000434734 TM7SF2O76062 418 aa5.06□□□□□ -1.6
HMGB3P10-201ENST00000434734 MT-ND1P03886 318 aa5.06□□□□□ -1.6
HMGB3P10-201ENST00000434734 S100A6P06703 90 aa5.06□□□□□ -1.6
HMGB3P10-201ENST00000434734 MED14OSP0DP75 135 aa5.06□□□□□ -1.6
HMGB3P10-201ENST00000434734 B4GALT1P15291 398 aa5.06□□□□□ -1.6
HMGB3P10-201ENST00000434734 IGFBP6P24592 240 aaPredicted RBP5.06□□□□□ -1.6
HMGB3P10-201ENST00000434734 U2AF2P26368 475 aaKnown RBP eCLIP5.06□□□□□ -1.6
HMGB3P10-201ENST00000434734 HOXC9P31274 260 aa5.06□□□□□ -1.6
HMGB3P10-201ENST00000434734 APOBEC3AP31941 199 aaPredicted RBP5.06□□□□□ -1.6
HMGB3P10-201ENST00000434734 PRDX2P32119 198 aa5.06□□□□□ -1.6
HMGB3P10-201ENST00000434734 ATP5C1P36542 298 aaKnown RBP5.06□□□□□ -1.6
HMGB3P10-201ENST00000434734 CLDN8P56748 225 aa5.06□□□□□ -1.6
HMGB3P10-201ENST00000434734 NUCB2P80303 420 aa5.06□□□□□ -1.6
HMGB3P10-201ENST00000434734 CAP1Q01518 475 aa5.06□□□□□ -1.6
HMGB3P10-201ENST00000434734 KRT31Q15323 416 aa5.06□□□□□ -1.6
HMGB3P10-201ENST00000434734 MEP1AQ16819 746 aa5.06□□□□□ -1.6
HMGB3P10-201ENST00000434734 Q3ZCU0 254 aa5.06□□□□□ -1.6
HMGB3P10-201ENST00000434734 PLK5Q496M5 336 aa5.06□□□□□ -1.6
HMGB3P10-201ENST00000434734 PDLIM3Q53GG5 364 aaPredicted RBP5.06□□□□□ -1.6
HMGB3P10-201ENST00000434734 ZNF618Q5T7W0 954 aa5.06□□□□□ -1.6
HMGB3P10-201ENST00000434734 VWA5B1Q5TIE3 1220 aa5.06□□□□□ -1.6
HMGB3P10-201ENST00000434734 SUSD4Q5VX71 490 aa5.06□□□□□ -1.6
HMGB3P10-201ENST00000434734 MFSD12Q6NUT3 480 aa5.06□□□□□ -1.6
HMGB3P10-201ENST00000434734 ANKRD54Q6NXT1 300 aa5.06□□□□□ -1.6
HMGB3P10-201ENST00000434734 ZNF474Q6S9Z5 364 aaPredicted RBP5.06□□□□□ -1.6
HMGB3P10-201ENST00000434734 DBX2Q6ZNG2 339 aa5.06□□□□□ -1.6
HMGB3P10-201ENST00000434734 TRMT11Q7Z4G4 463 aaKnown RBP5.06□□□□□ -1.6
HMGB3P10-201ENST00000434734 TMPRSS11BQ86T26 416 aa5.06□□□□□ -1.6
HMGB3P10-201ENST00000434734 TMPRSS12Q86WS5 348 aa5.06□□□□□ -1.6
HMGB3P10-201ENST00000434734 ARHGAP24Q8N264 748 aa5.06□□□□□ -1.6
HMGB3P10-201ENST00000434734 UBE2J2Q8N2K1 259 aa5.06□□□□□ -1.6
HMGB3P10-201ENST00000434734 PAQR4Q8N4S7 273 aaPredicted RBP5.06□□□□□ -1.6
HMGB3P10-201ENST00000434734 BEST2Q8NFU1 509 aa5.06□□□□□ -1.6
HMGB3P10-201ENST00000434734 CMASQ8NFW8 434 aaPredicted RBP5.06□□□□□ -1.6
HMGB3P10-201ENST00000434734 HDAC7Q8WUI4 952 aa5.06□□□□□ -1.6
HMGB3P10-201ENST00000434734 CELF1Q92879 486 aaKnown RBP5.06□□□□□ -1.6
HMGB3P10-201ENST00000434734 ARL5BQ96KC2 179 aa5.06□□□□□ -1.6
HMGB3P10-201ENST00000434734 SENP8Q96LD8 212 aa5.06□□□□□ -1.6
HMGB3P10-201ENST00000434734 TMEM79Q9BSE2 394 aa5.06□□□□□ -1.6
HMGB3P10-201ENST00000434734 FNDC11Q9BVV2 318 aa5.06□□□□□ -1.6
HMGB3P10-201ENST00000434734 SLC2A11Q9BYW1 496 aa5.06□□□□□ -1.6
HMGB3P10-201ENST00000434734 WWTR1Q9GZV5 400 aa5.06□□□□□ -1.6
HMGB3P10-201ENST00000434734 C12orf65Q9H3J6 166 aaKnown RBP5.06□□□□□ -1.6
HMGB3P10-201ENST00000434734 KCNK13Q9HB14 408 aa5.06□□□□□ -1.6
HMGB3P10-201ENST00000434734 KCNK12Q9HB15 430 aa5.06□□□□□ -1.6
HMGB3P10-201ENST00000434734 PARVGQ9HBI0 331 aa5.06□□□□□ -1.6
HMGB3P10-201ENST00000434734 SPACA1Q9HBV2 294 aa5.06□□□□□ -1.6
HMGB3P10-201ENST00000434734 Q9N2K0 584 aa5.06□□□□□ -1.6
HMGB3P10-201ENST00000434734 GPR108Q9NPR9 543 aa5.06□□□□□ -1.6
HMGB3P10-201ENST00000434734 ANKRD10Q9NXR5 420 aa5.06□□□□□ -1.6
HMGB3P10-201ENST00000434734 NDRG3Q9UGV2 375 aa5.06□□□□□ -1.6
HMGB3P10-201ENST00000434734 CHMP2BQ9UQN3 213 aa5.06□□□□□ -1.6
HMGB3P10-201ENST00000434734 HEMK1Q9Y5R4 338 aaPredicted RBP5.06□□□□□ -1.6
HMGB3P10-201ENST00000434734 KIF27Q86VH2 1401 aa5.06□□□□□ -1.6
HMGB3P10-201ENST00000434734 AHRRA9YTQ3 701 aa5.05□□□□□ -1.6
HMGB3P10-201ENST00000434734 VWC2LB2RUY7 222 aa5.05□□□□□ -1.6
HMGB3P10-201ENST00000434734 TMEM189-UBE2V1I3L0A0 370 aa5.05□□□□□ -1.6
HMGB3P10-201ENST00000434734 K7ERQ8 282 aa5.05□□□□□ -1.6
HMGB3P10-201ENST00000434734 M0QZ24 198 aa5.05□□□□□ -1.6
HMGB3P10-201ENST00000434734 YKT6O15498 198 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms