RNA–Protein interactions for RNA: ENST00000431742.2

CSTF3-202, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 2 BASIC

Gene CSTF3, Length 715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-202ENST00000431742 THEMIS2Q5TEJ8 643 aa13.82□□□□□ -0.2
CSTF3-202ENST00000431742 RNF44Q7L0R7 432 aa13.82□□□□□ -0.2
CSTF3-202ENST00000431742 CROCCP2Q86T23 111 aa13.82□□□□□ -0.2
CSTF3-202ENST00000431742 C17orf64Q86WR6 236 aa13.82□□□□□ -0.2
CSTF3-202ENST00000431742 LSMEM2Q8N112 164 aa13.82□□□□□ -0.2
CSTF3-202ENST00000431742 ZNF501Q96CX3 271 aaPredicted RBP13.82□□□□□ -0.2
CSTF3-202ENST00000431742 OR6C1Q96RD1 312 aa13.82□□□□□ -0.2
CSTF3-202ENST00000431742 TAAR9Q96RI9 348 aa13.82□□□□□ -0.2
CSTF3-202ENST00000431742 PLCD4Q9BRC7 762 aa13.82□□□□□ -0.2
CSTF3-202ENST00000431742 CD244Q9BZW8 370 aa13.82□□□□□ -0.2
CSTF3-202ENST00000431742 CNOT10Q9H9A5 744 aaKnown RBP13.82□□□□□ -0.2
CSTF3-202ENST00000431742 APMAPQ9HDC9 416 aa13.82□□□□□ -0.2
CSTF3-202ENST00000431742 ENAMQ9NRM1 1142 aa13.82□□□□□ -0.2
CSTF3-202ENST00000431742 FGF21Q9NSA1 209 aa13.82□□□□□ -0.2
CSTF3-202ENST00000431742 ABCF3Q9NUQ8 709 aa13.82□□□□□ -0.2
CSTF3-202ENST00000431742 SLC39A1Q9NY26 324 aa13.82□□□□□ -0.2
CSTF3-202ENST00000431742 DKK4Q9UBT3 224 aa13.82□□□□□ -0.2
CSTF3-202ENST00000431742 DCDC2Q9UHG0 476 aa13.82□□□□□ -0.2
CSTF3-202ENST00000431742 PILRAQ9UKJ1 303 aa13.82□□□□□ -0.2
CSTF3-202ENST00000431742 TMCO1Q9UM00 188 aa13.82□□□□□ -0.2
CSTF3-202ENST00000431742 PCDHGA7Q9Y5G6 932 aa13.82□□□□□ -0.2
CSTF3-202ENST00000431742 H3BMH7 237 aa13.81□□□□□ -0.2
CSTF3-202ENST00000431742 NVLO15381 856 aaKnown RBP13.81□□□□□ -0.2
CSTF3-202ENST00000431742 CTSVO60911 334 aa13.81□□□□□ -0.2
CSTF3-202ENST00000431742 STK16O75716 305 aa13.81□□□□□ -0.2
CSTF3-202ENST00000431742 WDR47O94967 919 aa13.81□□□□□ -0.2
CSTF3-202ENST00000431742 HRH2P25021 359 aa13.81□□□□□ -0.2
CSTF3-202ENST00000431742 CRHR1P34998 444 aa13.81□□□□□ -0.2
CSTF3-202ENST00000431742 GDF5P43026 501 aa13.81□□□□□ -0.2
CSTF3-202ENST00000431742 HSPA7P48741 367 aa13.81□□□□□ -0.2
CSTF3-202ENST00000431742 AGTR2P50052 363 aa13.81□□□□□ -0.2
CSTF3-202ENST00000431742 MAPK10P53779 464 aa13.81□□□□□ -0.2
CSTF3-202ENST00000431742 ALDH18A1P54886 795 aaKnown RBP13.81□□□□□ -0.2
CSTF3-202ENST00000431742 RELAQ04206 551 aa13.81□□□□□ -0.2
CSTF3-202ENST00000431742 FBXO48Q5FWF7 155 aa13.81□□□□□ -0.2
CSTF3-202ENST00000431742 CEP85LQ5SZL2 805 aa13.81□□□□□ -0.2
CSTF3-202ENST00000431742 CYB5D1Q6P9G0 228 aa13.81□□□□□ -0.2
CSTF3-202ENST00000431742 FOXR1Q6PIV2 292 aa13.81□□□□□ -0.2
CSTF3-202ENST00000431742 LRRC70Q7Z2Q7 622 aa13.81□□□□□ -0.2
CSTF3-202ENST00000431742 C4orf33Q8N1A6 199 aa13.81□□□□□ -0.2
CSTF3-202ENST00000431742 ABHD11Q8NFV4 315 aa13.81□□□□□ -0.2
CSTF3-202ENST00000431742 OR8K5Q8NH50 307 aa13.81□□□□□ -0.2
CSTF3-202ENST00000431742 USP7Q93009 1102 aa13.81□□□□□ -0.2
CSTF3-202ENST00000431742 NEIL2Q969S2 332 aa13.81□□□□□ -0.2
CSTF3-202ENST00000431742 ALKBH8Q96BT7 664 aaKnown RBP13.81□□□□□ -0.2
CSTF3-202ENST00000431742 SCYL1Q96KG9 808 aa13.81□□□□□ -0.2
CSTF3-202ENST00000431742 ZNF285Q96NJ3 590 aa13.81□□□□□ -0.2
CSTF3-202ENST00000431742 TEFMQ96QE5 360 aaKnown RBP13.81□□□□□ -0.2
CSTF3-202ENST00000431742 ARGLU1Q9NWB6 273 aaPredicted RBP13.81□□□□□ -0.2
CSTF3-202ENST00000431742 CPSF2Q9P2I0 782 aaKnown RBP13.81□□□□□ -0.2
CSTF3-202ENST00000431742 SNX7Q9UNH6 387 aa13.81□□□□□ -0.2
CSTF3-202ENST00000431742 SLC22A14Q9Y267 594 aa13.81□□□□□ -0.2
CSTF3-202ENST00000431742 ACACAQ13085 2346 aa13.81□□□□□ -0.2
CSTF3-202ENST00000431742 STX16-NPEPL1H3BU86 382 aa13.8□□□□□ -0.2
CSTF3-202ENST00000431742 STX16O14662 325 aa13.8□□□□□ -0.2
CSTF3-202ENST00000431742 POLR1CO15160 346 aaPredicted RBP13.8□□□□□ -0.2
CSTF3-202ENST00000431742 MAP3K7O43318 606 aa13.8□□□□□ -0.2
CSTF3-202ENST00000431742 CDH1P12830 882 aa13.8□□□□□ -0.2
CSTF3-202ENST00000431742 GFAPP14136 432 aa13.8□□□□□ -0.2
CSTF3-202ENST00000431742 EZRP15311 586 aaKnown RBP13.8□□□□□ -0.2
CSTF3-202ENST00000431742 EPORP19235 508 aa13.8□□□□□ -0.2
CSTF3-202ENST00000431742 RBMS1P29558 406 aaKnown RBP13.8□□□□□ -0.2
CSTF3-202ENST00000431742 CCT5P48643 541 aa13.8□□□□□ -0.2
CSTF3-202ENST00000431742 ERVPABLB-1P60509 514 aa13.8□□□□□ -0.2
CSTF3-202ENST00000431742 CSNK1G2P78368 415 aa13.8□□□□□ -0.2
CSTF3-202ENST00000431742 NFKB2Q00653 900 aa13.8□□□□□ -0.2
CSTF3-202ENST00000431742 FOXM1Q08050 763 aa13.8□□□□□ -0.2
CSTF3-202ENST00000431742 CDC16Q13042 620 aa13.8□□□□□ -0.2
CSTF3-202ENST00000431742 PCBP2Q15366 365 aaKnown RBP eCLIP13.8□□□□□ -0.2
CSTF3-202ENST00000431742 PFKFB4Q16877 469 aa13.8□□□□□ -0.2
CSTF3-202ENST00000431742 DEFB110Q30KQ9 67 aa13.8□□□□□ -0.2
CSTF3-202ENST00000431742 TBC1D25Q3MII6 688 aa13.8□□□□□ -0.2
CSTF3-202ENST00000431742 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.8□□□□□ -0.2
CSTF3-202ENST00000431742 DCAF12Q5T6F0 453 aa13.8□□□□□ -0.2
CSTF3-202ENST00000431742 METTL2BQ6P1Q9 378 aaKnown RBP13.8□□□□□ -0.2
CSTF3-202ENST00000431742 C16orf46Q6P387 395 aa13.8□□□□□ -0.2
CSTF3-202ENST00000431742 CEACAM20Q6UY09 585 aa13.8□□□□□ -0.2
CSTF3-202ENST00000431742 BPHLQ86WA6 291 aaPredicted RBP13.8□□□□□ -0.2
CSTF3-202ENST00000431742 SRRM1Q8IYB3 904 aaKnown RBP13.8□□□□□ -0.2
CSTF3-202ENST00000431742 PTGR2Q8N8N7 351 aaPredicted RBP13.8□□□□□ -0.2
CSTF3-202ENST00000431742 BANPQ8N9N5 519 aa13.8□□□□□ -0.2
CSTF3-202ENST00000431742 OR4K1Q8NGD4 311 aa13.8□□□□□ -0.2
CSTF3-202ENST00000431742 SLC5A11Q8WWX8 675 aa13.8□□□□□ -0.2
CSTF3-202ENST00000431742 ESAMQ96AP7 390 aa13.8□□□□□ -0.2
CSTF3-202ENST00000431742 PGM2Q96G03 612 aa13.8□□□□□ -0.2
CSTF3-202ENST00000431742 APOPT1Q96IL0 206 aa13.8□□□□□ -0.2
CSTF3-202ENST00000431742 ZNF578Q96N58 590 aaPredicted RBP13.8□□□□□ -0.2
CSTF3-202ENST00000431742 CTRCQ99895 268 aa13.8□□□□□ -0.2
CSTF3-202ENST00000431742 ZPBPQ9BS86 351 aa13.8□□□□□ -0.2
CSTF3-202ENST00000431742 ASPSCR1Q9BZE9 553 aa13.8□□□□□ -0.2
CSTF3-202ENST00000431742 SYNPO2LQ9H987 977 aa13.8□□□□□ -0.2
CSTF3-202ENST00000431742 TMEM184CQ9NVA4 438 aa13.8□□□□□ -0.2
CSTF3-202ENST00000431742 DNAJC11Q9NVH1 559 aa13.8□□□□□ -0.2
CSTF3-202ENST00000431742 GPRC5BQ9NZH0 403 aa13.8□□□□□ -0.2
CSTF3-202ENST00000431742 FOXJ2Q9P0K8 574 aa13.8□□□□□ -0.2
CSTF3-202ENST00000431742 SENP1Q9P0U3 644 aa13.8□□□□□ -0.2
CSTF3-202ENST00000431742 ACSL6Q9UKU0 697 aa13.8□□□□□ -0.2
CSTF3-202ENST00000431742 RARRES3Q9UL19 164 aa13.8□□□□□ -0.2
CSTF3-202ENST00000431742 PLCL2Q9UPR0 1127 aa13.8□□□□□ -0.2
CSTF3-202ENST00000431742 B3GALT1Q9Y5Z6 326 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms