RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 ISG20Q96AZ6 181 aaKnown RBP12.73□□□□□ -0.37
PTPRN2-202ENST00000389416 LOC285095A0A1B0GVY8 99 aa12.73□□□□□ -0.37
PTPRN2-202ENST00000389416 ZNF860A6NHJ4 632 aa12.73□□□□□ -0.37
PTPRN2-202ENST00000389416 FAM170BA6NMN3 283 aa12.73□□□□□ -0.37
PTPRN2-202ENST00000389416 G3V2T6 193 aa12.73□□□□□ -0.37
PTPRN2-202ENST00000389416 CXCR6O00574 342 aa12.73□□□□□ -0.37
PTPRN2-202ENST00000389416 IFNW1P05000 195 aa12.73□□□□□ -0.37
PTPRN2-202ENST00000389416 MTHFD1P11586 935 aaKnown RBP12.73□□□□□ -0.37
PTPRN2-202ENST00000389416 ELOCQ15369 112 aa12.73□□□□□ -0.37
PTPRN2-202ENST00000389416 C6orf136Q5SQH8 315 aa12.73□□□□□ -0.37
PTPRN2-202ENST00000389416 MLIPQ5VWP3 458 aa12.73□□□□□ -0.37
PTPRN2-202ENST00000389416 CCSAPQ6IQ19 270 aaPredicted RBP12.73□□□□□ -0.37
PTPRN2-202ENST00000389416 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.73□□□□□ -0.37
PTPRN2-202ENST00000389416 ANKRD27Q96NW4 1050 aa12.73□□□□□ -0.37
PTPRN2-202ENST00000389416 HHIPQ96QV1 700 aa12.73□□□□□ -0.37
PTPRN2-202ENST00000389416 ZNF382Q96SR6 550 aa12.73□□□□□ -0.37
PTPRN2-202ENST00000389416 ZNF282Q9UDV7 671 aaPredicted RBP12.73□□□□□ -0.37
PTPRN2-202ENST00000389416 DLGAP4Q9Y2H0 992 aa12.73□□□□□ -0.37
PTPRN2-202ENST00000389416 PTGDR2Q9Y5Y4 395 aa12.73□□□□□ -0.37
PTPRN2-202ENST00000389416 AP4B1Q9Y6B7 739 aa12.73□□□□□ -0.37
PTPRN2-202ENST00000389416 SBF2Q86WG5 1849 aa12.73□□□□□ -0.37
PTPRN2-202ENST00000389416 B4GALT2O60909 372 aa12.73□□□□□ -0.37
PTPRN2-202ENST00000389416 APOA1P02647 267 aa12.73□□□□□ -0.37
PTPRN2-202ENST00000389416 C8orf89P0DMQ9 161 aa12.73□□□□□ -0.37
PTPRN2-202ENST00000389416 SHMT2P34897 504 aa12.73□□□□□ -0.37
PTPRN2-202ENST00000389416 SIM2Q14190 667 aaPredicted RBP12.73□□□□□ -0.37
PTPRN2-202ENST00000389416 MRPL58Q14197 206 aaKnown RBP12.73□□□□□ -0.37
PTPRN2-202ENST00000389416 SYVN1Q86TM6 617 aa12.73□□□□□ -0.37
PTPRN2-202ENST00000389416 MFSD6LQ8IWD5 586 aa12.73□□□□□ -0.37
PTPRN2-202ENST00000389416 COX18Q8N8Q8 333 aa12.73□□□□□ -0.37
PTPRN2-202ENST00000389416 TRPV3Q8NET8 790 aa12.73□□□□□ -0.37
PTPRN2-202ENST00000389416 FOXJ1Q92949 421 aa12.73□□□□□ -0.37
PTPRN2-202ENST00000389416 LRRC58Q96CX6 371 aa12.73□□□□□ -0.37
PTPRN2-202ENST00000389416 CGREF1Q99674 301 aa12.73□□□□□ -0.37
PTPRN2-202ENST00000389416 SLC7A8Q9UHI5 535 aa12.73□□□□□ -0.37
PTPRN2-202ENST00000389416 MRTO4Q9UKD2 239 aaKnown RBP12.73□□□□□ -0.37
PTPRN2-202ENST00000389416 OARD1Q9Y530 152 aa12.73□□□□□ -0.37
PTPRN2-202ENST00000389416 SCELO95171 688 aa12.72□□□□□ -0.37
PTPRN2-202ENST00000389416 PGRP06401 933 aa12.72□□□□□ -0.37
PTPRN2-202ENST00000389416 THEGLP0DJG4 465 aa12.72□□□□□ -0.37
PTPRN2-202ENST00000389416 PCSK2P16519 638 aa12.72□□□□□ -0.37
PTPRN2-202ENST00000389416 MAGEA6P43360 314 aa12.72□□□□□ -0.37
PTPRN2-202ENST00000389416 CLDN2P57739 230 aa12.72□□□□□ -0.37
PTPRN2-202ENST00000389416 LUZP2Q86TE4 346 aa12.72□□□□□ -0.37
PTPRN2-202ENST00000389416 LHX3Q9UBR4 397 aa12.72□□□□□ -0.37
PTPRN2-202ENST00000389416 H3BNC9 293 aa12.72□□□□□ -0.37
PTPRN2-202ENST00000389416 ERN1O75460 977 aaKnown RBP12.72□□□□□ -0.37
PTPRN2-202ENST00000389416 TFPIP10646 304 aa12.72□□□□□ -0.37
PTPRN2-202ENST00000389416 TIMP2P16035 220 aa12.72□□□□□ -0.37
PTPRN2-202ENST00000389416 TCEA1P23193 301 aaKnown RBP12.72□□□□□ -0.37
PTPRN2-202ENST00000389416 ITGB7P26010 798 aa12.72□□□□□ -0.37
PTPRN2-202ENST00000389416 FEN1P39748 380 aaKnown RBP12.72□□□□□ -0.37
PTPRN2-202ENST00000389416 TBPL1P62380 186 aa12.72□□□□□ -0.37
PTPRN2-202ENST00000389416 PTGR1Q14914 329 aa12.72□□□□□ -0.37
PTPRN2-202ENST00000389416 ANKRD26P1Q6NSI1 321 aa12.72□□□□□ -0.37
PTPRN2-202ENST00000389416 ABHD13Q7L211 337 aa12.72□□□□□ -0.37
PTPRN2-202ENST00000389416 WFDC5Q8TCV5 224 aa12.72□□□□□ -0.37
PTPRN2-202ENST00000389416 TEFMQ96QE5 360 aaKnown RBP12.72□□□□□ -0.37
PTPRN2-202ENST00000389416 LRRC3Q9BY71 257 aa12.72□□□□□ -0.37
PTPRN2-202ENST00000389416 REXO4Q9GZR2 422 aaKnown RBP12.72□□□□□ -0.37
PTPRN2-202ENST00000389416 ARNT2Q9HBZ2 717 aa12.72□□□□□ -0.37
PTPRN2-202ENST00000389416 ZIM2Q9NZV7 527 aa12.72□□□□□ -0.37
PTPRN2-202ENST00000389416 NDUFA13Q9P0J0 144 aa12.72□□□□□ -0.37
PTPRN2-202ENST00000389416 MYL12BO14950 172 aa12.72□□□□□ -0.37
PTPRN2-202ENST00000389416 SDC3O75056 442 aa12.72□□□□□ -0.37
PTPRN2-202ENST00000389416 IL7RP16871 459 aa12.72□□□□□ -0.37
PTPRN2-202ENST00000389416 C18orf21Q32NC0 220 aaPredicted RBP12.72□□□□□ -0.37
PTPRN2-202ENST00000389416 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.72□□□□□ -0.37
PTPRN2-202ENST00000389416 PDP1Q9P0J1 537 aaPredicted RBP12.72□□□□□ -0.37
PTPRN2-202ENST00000389416 TRPS1Q9UHF7 1281 aa12.72□□□□□ -0.37
PTPRN2-202ENST00000389416 A0A087WXM4 84 aa12.71□□□□□ -0.37
PTPRN2-202ENST00000389416 TPST2O60704 377 aa12.71□□□□□ -0.37
PTPRN2-202ENST00000389416 SLC16A8O95907 504 aa12.71□□□□□ -0.37
PTPRN2-202ENST00000389416 SEMA3BQ13214 749 aa12.71□□□□□ -0.37
PTPRN2-202ENST00000389416 USP53Q70EK8 1073 aa12.71□□□□□ -0.37
PTPRN2-202ENST00000389416 CLVS1Q8IUQ0 354 aaPredicted RBP12.71□□□□□ -0.37
PTPRN2-202ENST00000389416 PGBD5Q8N414 524 aa12.71□□□□□ -0.37
PTPRN2-202ENST00000389416 AVL9Q8NBF6 648 aa12.71□□□□□ -0.37
PTPRN2-202ENST00000389416 OR4K1Q8NGD4 311 aa12.71□□□□□ -0.37
PTPRN2-202ENST00000389416 MAPK15Q8TD08 544 aa12.71□□□□□ -0.37
PTPRN2-202ENST00000389416 ARMC5Q96C12 935 aa12.71□□□□□ -0.37
PTPRN2-202ENST00000389416 SUCOQ9UBS9 1254 aaKnown RBP12.71□□□□□ -0.37
PTPRN2-202ENST00000389416 TESMINQ9Y4I5 508 aa12.71□□□□□ -0.37
PTPRN2-202ENST00000389416 CCDC189A1A4V9 331 aa12.71□□□□□ -0.37
PTPRN2-202ENST00000389416 OR6C74A6NCV1 312 aa12.71□□□□□ -0.37
PTPRN2-202ENST00000389416 MPC1LP0DKB6 136 aa12.71□□□□□ -0.37
PTPRN2-202ENST00000389416 C1GALT1C1LP0DN25 315 aa12.71□□□□□ -0.37
PTPRN2-202ENST00000389416 CCNA2P20248 432 aa12.71□□□□□ -0.37
PTPRN2-202ENST00000389416 IL12RB1P42701 662 aa12.71□□□□□ -0.37
PTPRN2-202ENST00000389416 PDK3Q15120 406 aa12.71□□□□□ -0.37
PTPRN2-202ENST00000389416 SVOPQ8N4V2 548 aa12.71□□□□□ -0.37
PTPRN2-202ENST00000389416 OR13J1Q8NGT2 312 aa12.71□□□□□ -0.37
PTPRN2-202ENST00000389416 OR2A12Q8NGT7 310 aa12.71□□□□□ -0.37
PTPRN2-202ENST00000389416 DENND1AQ8TEH3 1009 aa12.71□□□□□ -0.37
PTPRN2-202ENST00000389416 HLA-CQ95604 372 aa12.71□□□□□ -0.37
PTPRN2-202ENST00000389416 FUBP1Q96AE4 644 aaKnown RBP12.71□□□□□ -0.37
PTPRN2-202ENST00000389416 MRPL48Q96GC5 212 aaKnown RBP12.71□□□□□ -0.37
PTPRN2-202ENST00000389416 SLC35A5Q9BS91 424 aa12.71□□□□□ -0.37
PTPRN2-202ENST00000389416 DCUN1D5Q9BTE7 237 aa12.71□□□□□ -0.37
PTPRN2-202ENST00000389416 DPH7Q9BTV6 452 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms