RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 CXCL14O95715 111 aa16.95■□□□□ 0.3
PTPRU-202ENST00000373779 FGF4P08620 206 aa16.95■□□□□ 0.3
PTPRU-202ENST00000373779 LAG3P18627 525 aa16.95■□□□□ 0.3
PTPRU-202ENST00000373779 THOC6Q86W42 341 aaKnown RBP16.95■□□□□ 0.3
PTPRU-202ENST00000373779 OR5AK3PQ8NH89 298 aa16.95■□□□□ 0.3
PTPRU-202ENST00000373779 PIGXQ8TBF5 258 aa16.95■□□□□ 0.3
PTPRU-202ENST00000373779 TFAP2CQ92754 450 aa16.95■□□□□ 0.3
PTPRU-202ENST00000373779 MAPKAP1Q9BPZ7 522 aa16.95■□□□□ 0.3
PTPRU-202ENST00000373779 NPLQ9BXD5 320 aaPredicted RBP16.95■□□□□ 0.3
PTPRU-202ENST00000373779 SLC22A4Q9H015 551 aa16.95■□□□□ 0.3
PTPRU-202ENST00000373779 TRPV5Q9NQA5 729 aa16.95■□□□□ 0.3
PTPRU-202ENST00000373779 MTX2O75431 263 aa16.95■□□□□ 0.3
PTPRU-202ENST00000373779 GPX3P22352 226 aa16.95■□□□□ 0.3
PTPRU-202ENST00000373779 DSTNP60981 165 aa16.95■□□□□ 0.3
PTPRU-202ENST00000373779 SLBPQ14493 270 aaKnown RBP eCLIP16.95■□□□□ 0.3
PTPRU-202ENST00000373779 PSAPL1Q6NUJ1 521 aa16.95■□□□□ 0.3
PTPRU-202ENST00000373779 MAVSQ7Z434 540 aa16.95■□□□□ 0.3
PTPRU-202ENST00000373779 DBF4BQ8NFT6 615 aa16.95■□□□□ 0.3
PTPRU-202ENST00000373779 PAAF1Q9BRP4 392 aa16.95■□□□□ 0.3
PTPRU-202ENST00000373779 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.95■□□□□ 0.3
PTPRU-202ENST00000373779 PCTPQ9UKL6 214 aa16.95■□□□□ 0.3
PTPRU-202ENST00000373779 OARD1Q9Y530 152 aa16.95■□□□□ 0.3
PTPRU-202ENST00000373779 URADA6NGE7 173 aa16.94■□□□□ 0.3
PTPRU-202ENST00000373779 H3BMQ9 156 aa16.94■□□□□ 0.3
PTPRU-202ENST00000373779 KHDRBS3O75525 346 aaKnown RBP16.94■□□□□ 0.3
PTPRU-202ENST00000373779 ATP1B2P14415 290 aaPredicted RBP16.94■□□□□ 0.3
PTPRU-202ENST00000373779 RGS8P57771 180 aaPredicted RBP16.94■□□□□ 0.3
PTPRU-202ENST00000373779 GPR17Q13304 367 aa16.94■□□□□ 0.3
PTPRU-202ENST00000373779 CYBRD1Q53TN4 286 aa16.94■□□□□ 0.3
PTPRU-202ENST00000373779 OR52B6Q8NGF0 335 aa16.94■□□□□ 0.3
PTPRU-202ENST00000373779 TMEM40Q8WWA1 233 aa16.94■□□□□ 0.3
PTPRU-202ENST00000373779 SLC35G5Q96KT7 338 aa16.94■□□□□ 0.3
PTPRU-202ENST00000373779 COG8Q96MW5 612 aa16.94■□□□□ 0.3
PTPRU-202ENST00000373779 FUNDC2Q9BWH2 189 aa16.94■□□□□ 0.3
PTPRU-202ENST00000373779 UBE2QL1A1L167 161 aa16.94■□□□□ 0.3
PTPRU-202ENST00000373779 ZNF701M0R085 212 aaPredicted RBP16.94■□□□□ 0.3
PTPRU-202ENST00000373779 STK25O00506 426 aa16.94■□□□□ 0.3
PTPRU-202ENST00000373779 ENPP6Q6UWR7 440 aa16.94■□□□□ 0.3
PTPRU-202ENST00000373779 OR2AP1Q8NGE2 309 aa16.94■□□□□ 0.3
PTPRU-202ENST00000373779 NFKBIDQ8NI38 313 aa16.94■□□□□ 0.3
PTPRU-202ENST00000373779 GRPEL2Q8TAA5 225 aa16.94■□□□□ 0.3
PTPRU-202ENST00000373779 MMP27Q9H306 513 aa16.94■□□□□ 0.3
PTPRU-202ENST00000373779 TRBC2A0A5B9 178 aa16.94■□□□□ 0.3
PTPRU-202ENST00000373779 CDK4P11802 303 aa16.94■□□□□ 0.3
PTPRU-202ENST00000373779 FAM46CQ5VWP2 391 aa16.94■□□□□ 0.3
PTPRU-202ENST00000373779 NCCRP1Q6ZVX7 275 aaPredicted RBP16.94■□□□□ 0.3
PTPRU-202ENST00000373779 NPAS3Q8IXF0 933 aa16.94■□□□□ 0.3
PTPRU-202ENST00000373779 FLCNQ8NFG4 579 aa16.94■□□□□ 0.3
PTPRU-202ENST00000373779 ART5Q96L15 291 aa16.94■□□□□ 0.3
PTPRU-202ENST00000373779 EFCAB11Q9BUY7 163 aa16.94■□□□□ 0.3
PTPRU-202ENST00000373779 MKLN1Q9UL63 735 aa16.94■□□□□ 0.3
PTPRU-202ENST00000373779 FUBP1Q96AE4 644 aaKnown RBP16.94■□□□□ 0.3
PTPRU-202ENST00000373779 C11orf24Q96F05 449 aaPredicted RBP16.94■□□□□ 0.3
PTPRU-202ENST00000373779 TBC1D17Q9HA65 648 aa16.94■□□□□ 0.3
PTPRU-202ENST00000373779 SPIN1Q9Y657 262 aaPredicted RBP16.94■□□□□ 0.3
PTPRU-202ENST00000373779 ZBTB42B2RXF5 422 aa16.94■□□□□ 0.3
PTPRU-202ENST00000373779 OR5F1O95221 314 aa16.94■□□□□ 0.3
PTPRU-202ENST00000373779 ADH1CP00326 375 aa16.94■□□□□ 0.3
PTPRU-202ENST00000373779 ITGB1P05556 798 aa16.94■□□□□ 0.3
PTPRU-202ENST00000373779 CDK6Q00534 326 aa16.94■□□□□ 0.3
PTPRU-202ENST00000373779 RING1Q06587 406 aa16.94■□□□□ 0.3
PTPRU-202ENST00000373779 FAM43BQ6ZT52 329 aaPredicted RBP16.94■□□□□ 0.3
PTPRU-202ENST00000373779 CNTN4Q8IWV2 1026 aa16.94■□□□□ 0.3
PTPRU-202ENST00000373779 SCML4Q8N228 414 aa16.94■□□□□ 0.3
PTPRU-202ENST00000373779 TMEM125Q96AQ2 219 aa16.94■□□□□ 0.3
PTPRU-202ENST00000373779 TAS2R7Q9NYW3 318 aa16.94■□□□□ 0.3
PTPRU-202ENST00000373779 SPATA7Q9P0W8 599 aa16.94■□□□□ 0.3
PTPRU-202ENST00000373779 M0QX08 132 aa16.93■□□□□ 0.3
PTPRU-202ENST00000373779 PITPNM1O00562 1244 aa16.93■□□□□ 0.3
PTPRU-202ENST00000373779 FBP2O00757 339 aa16.93■□□□□ 0.3
PTPRU-202ENST00000373779 IFNGP01579 166 aa16.93■□□□□ 0.3
PTPRU-202ENST00000373779 PSMA3P25788 255 aa16.93■□□□□ 0.3
PTPRU-202ENST00000373779 RBM12BQ8IXT5 1001 aaKnown RBP16.93■□□□□ 0.3
PTPRU-202ENST00000373779 KLHL6Q8WZ60 621 aa16.93■□□□□ 0.3
PTPRU-202ENST00000373779 ZBED6CLQ96FA7 236 aaPredicted RBP16.93■□□□□ 0.3
PTPRU-202ENST00000373779 RNF208Q9H0X6 261 aa16.93■□□□□ 0.3
PTPRU-202ENST00000373779 AGPAT4Q9NRZ5 378 aa16.93■□□□□ 0.3
PTPRU-202ENST00000373779 MAP10Q9P2G4 905 aa16.93■□□□□ 0.3
PTPRU-202ENST00000373779 YIPF1Q9Y548 306 aa16.93■□□□□ 0.3
PTPRU-202ENST00000373779 ARHGEF33A8MVX0 844 aa16.93■□□□□ 0.3
PTPRU-202ENST00000373779 WNT9AO14904 365 aa16.93■□□□□ 0.3
PTPRU-202ENST00000373779 CCL16O15467 120 aa16.93■□□□□ 0.3
PTPRU-202ENST00000373779 PI15O43692 258 aa16.93■□□□□ 0.3
PTPRU-202ENST00000373779 CNMDO75829 334 aa16.93■□□□□ 0.3
PTPRU-202ENST00000373779 TGFB1P01137 390 aa16.93■□□□□ 0.3
PTPRU-202ENST00000373779 PRNPP04156 253 aa16.93■□□□□ 0.3
PTPRU-202ENST00000373779 CHCHD4Q8N4Q1 142 aa16.93■□□□□ 0.3
PTPRU-202ENST00000373779 TRPV1Q8NER1 839 aa16.93■□□□□ 0.3
PTPRU-202ENST00000373779 CXorf40BQ96DE9 158 aa16.93■□□□□ 0.3
PTPRU-202ENST00000373779 MAGIXQ9H6Y5 334 aa16.93■□□□□ 0.3
PTPRU-202ENST00000373779 DKK3Q9UBP4 350 aa16.93■□□□□ 0.3
PTPRU-202ENST00000373779 SLC1A7O00341 560 aa16.93■□□□□ 0.3
PTPRU-202ENST00000373779 OR1F1O43749 312 aa16.93■□□□□ 0.3
PTPRU-202ENST00000373779 FGF19O95750 216 aa16.93■□□□□ 0.3
PTPRU-202ENST00000373779 RCVRNP35243 200 aa16.93■□□□□ 0.3
PTPRU-202ENST00000373779 LGALS3BPQ08380 585 aa16.93■□□□□ 0.3
PTPRU-202ENST00000373779 RNASE12Q5GAN4 147 aaKnown RBP16.93■□□□□ 0.3
PTPRU-202ENST00000373779 MAMDC4Q6UXC1 1216 aa16.93■□□□□ 0.3
PTPRU-202ENST00000373779 LARP4Q71RC2 724 aaKnown RBP eCLIP16.93■□□□□ 0.33e-11■□□□□ 9.9
PTPRU-202ENST00000373779 CLEC14AQ86T13 490 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms