RNA–Protein interactions for RNA: ENST00000231656.12

CDX1-201, Transcript of caudal type homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-201ENST00000231656 ZNF184Q99676 751 aaPredicted RBP21.89■■□□□ 1.1
CDX1-201ENST00000231656 SNX6Q9UNH7 406 aa21.89■■□□□ 1.1
CDX1-201ENST00000231656 PCDHA9Q9Y5H5 950 aa21.89■■□□□ 1.1
CDX1-201ENST00000231656 PRSS38A1L453 326 aa21.89■■□□□ 1.09
CDX1-201ENST00000231656 H3BM21 787 aa21.89■■□□□ 1.09
CDX1-201ENST00000231656 TOR1BO14657 336 aa21.89■■□□□ 1.09
CDX1-201ENST00000231656 C8BP07358 591 aa21.89■■□□□ 1.09
CDX1-201ENST00000231656 RABIFP47224 123 aa21.89■■□□□ 1.09
CDX1-201ENST00000231656 KIAA0040Q15053 153 aa21.89■■□□□ 1.09
CDX1-201ENST00000231656 PYCR3Q53H96 274 aa21.89■■□□□ 1.09
CDX1-201ENST00000231656 AGTRAPQ6RW13 159 aa21.89■■□□□ 1.09
CDX1-201ENST00000231656 SLC36A4Q6YBV0 504 aa21.89■■□□□ 1.09
CDX1-201ENST00000231656 CHST15Q7LFX5 561 aaPredicted RBP21.89■■□□□ 1.09
CDX1-201ENST00000231656 SPATA24Q86W54 205 aa21.89■■□□□ 1.09
CDX1-201ENST00000231656 GALNT13Q8IUC8 556 aa21.89■■□□□ 1.09
CDX1-201ENST00000231656 MTFMTQ96DP5 389 aaKnown RBP21.89■■□□□ 1.09
CDX1-201ENST00000231656 MAGEB10Q96LZ2 347 aaPredicted RBP21.89■■□□□ 1.09
CDX1-201ENST00000231656 PKP4Q99569 1192 aa21.89■■□□□ 1.09
CDX1-201ENST00000231656 PRMT8Q9NR22 394 aaPredicted RBP21.89■■□□□ 1.09
CDX1-201ENST00000231656 C1orf109Q9NX04 203 aa21.89■■□□□ 1.09
CDX1-201ENST00000231656 C6orf203Q9P0P8 240 aaPredicted RBP21.89■■□□□ 1.09
CDX1-201ENST00000231656 SLCO1B1Q9Y6L6 691 aa21.89■■□□□ 1.09
CDX1-201ENST00000231656 KNL1Q8NG31 2342 aa21.88■■□□□ 1.09
CDX1-201ENST00000231656 DNAH14Q0VDD8 3507 aa21.88■■□□□ 1.09
CDX1-201ENST00000231656 CCDC163A0A0D9SF12 145 aa21.88■■□□□ 1.09
CDX1-201ENST00000231656 IFRD1O00458 451 aaPredicted RBP21.88■■□□□ 1.09
CDX1-201ENST00000231656 HSD17B1P14061 328 aa21.88■■□□□ 1.09
CDX1-201ENST00000231656 PRPH2P23942 346 aa21.88■■□□□ 1.09
CDX1-201ENST00000231656 PLOD1Q02809 727 aaPredicted RBP21.88■■□□□ 1.09
CDX1-201ENST00000231656 SPATS1Q496A3 300 aa21.88■■□□□ 1.09
CDX1-201ENST00000231656 THOC6Q86W42 341 aaKnown RBP21.88■■□□□ 1.09
CDX1-201ENST00000231656 DPP10Q8N608 796 aa21.88■■□□□ 1.09
CDX1-201ENST00000231656 FBXO15Q8NCQ5 510 aaPredicted RBP21.88■■□□□ 1.09
CDX1-201ENST00000231656 SELENOMQ8WWX9 145 aa21.88■■□□□ 1.09
CDX1-201ENST00000231656 TMEM125Q96AQ2 219 aa21.88■■□□□ 1.09
CDX1-201ENST00000231656 PDXPQ96GD0 296 aa21.88■■□□□ 1.09
CDX1-201ENST00000231656 FOPNLQ96NB1 174 aa21.88■■□□□ 1.09
CDX1-201ENST00000231656 INTS7Q9NVH2 962 aaKnown RBP21.88■■□□□ 1.09
CDX1-201ENST00000231656 PRSS51A0A1B0GVH4 220 aa21.87■■□□□ 1.09
CDX1-201ENST00000231656 SERTM1A2A2V5 107 aa21.87■■□□□ 1.09
CDX1-201ENST00000231656 KLHL33A6NCF5 533 aa21.87■■□□□ 1.09
CDX1-201ENST00000231656 SEC22BO75396 215 aa21.87■■□□□ 1.09
CDX1-201ENST00000231656 ACP5P13686 325 aa21.87■■□□□ 1.09
CDX1-201ENST00000231656 BCKDHBP21953 392 aa21.87■■□□□ 1.09
CDX1-201ENST00000231656 VARSP26640 1264 aaKnown RBP21.87■■□□□ 1.09
CDX1-201ENST00000231656 CD27P26842 260 aa21.87■■□□□ 1.09
CDX1-201ENST00000231656 IMPA1P29218 277 aa21.87■■□□□ 1.09
CDX1-201ENST00000231656 CHIT1Q13231 466 aa21.87■■□□□ 1.09
CDX1-201ENST00000231656 SLC22A18ASQ8N1D0 253 aa21.87■■□□□ 1.09
CDX1-201ENST00000231656 OR56A3Q8NH54 315 aa21.87■■□□□ 1.09
CDX1-201ENST00000231656 OR1E3Q8WZA6 343 aa21.87■■□□□ 1.09
CDX1-201ENST00000231656 TIMM29Q9BSF4 260 aa21.87■■□□□ 1.09
CDX1-201ENST00000231656 DPEP2Q9H4A9 486 aa21.87■■□□□ 1.09
CDX1-201ENST00000231656 ELOVL6Q9H5J4 265 aa21.87■■□□□ 1.09
CDX1-201ENST00000231656 LRP4O75096 1905 aa21.87■■□□□ 1.09
CDX1-201ENST00000231656 NPIPB8E9PQR5 432 aa21.87■■□□□ 1.09
CDX1-201ENST00000231656 MAP3K13O43283 966 aa21.87■■□□□ 1.09
CDX1-201ENST00000231656 LAMTOR5O43504 91 aa21.87■■□□□ 1.09
CDX1-201ENST00000231656 UGDHO60701 494 aa21.87■■□□□ 1.09
CDX1-201ENST00000231656 C1orf105O95561 183 aa21.87■■□□□ 1.09
CDX1-201ENST00000231656 NPPAP01160 153 aa21.87■■□□□ 1.09
CDX1-201ENST00000231656 TDGF1P13385 188 aa21.87■■□□□ 1.09
CDX1-201ENST00000231656 JUPP14923 745 aa21.87■■□□□ 1.09
CDX1-201ENST00000231656 NEK2P51955 445 aa21.87■■□□□ 1.09
CDX1-201ENST00000231656 RPA4Q13156 261 aa21.87■■□□□ 1.09
CDX1-201ENST00000231656 PTGR1Q14914 329 aa21.87■■□□□ 1.09
CDX1-201ENST00000231656 LPCAT4Q643R3 524 aa21.87■■□□□ 1.09
CDX1-201ENST00000231656 SLC2A7Q6PXP3 512 aa21.87■■□□□ 1.09
CDX1-201ENST00000231656 IZUMO2Q6UXV1 221 aa21.87■■□□□ 1.09
CDX1-201ENST00000231656 LIX1Q8N485 282 aa21.87■■□□□ 1.09
CDX1-201ENST00000231656 NUDT8Q8WV74 236 aa21.87■■□□□ 1.09
CDX1-201ENST00000231656 SLC6A18Q96N87 628 aa21.87■■□□□ 1.09
CDX1-201ENST00000231656 ECSITQ9BQ95 431 aa21.87■■□□□ 1.09
CDX1-201ENST00000231656 CARS2Q9HA77 564 aaKnown RBP21.87■■□□□ 1.09
CDX1-201ENST00000231656 GPSM3Q9Y4H4 160 aa21.87■■□□□ 1.09
CDX1-201ENST00000231656 TCRBV3S1A0A5B6 114 aa21.86■■□□□ 1.09
CDX1-201ENST00000231656 TNFRSF10CO14798 259 aa21.86■■□□□ 1.09
CDX1-201ENST00000231656 DNAJA2O60884 412 aa21.86■■□□□ 1.09
CDX1-201ENST00000231656 SLC16A8O95907 504 aa21.86■■□□□ 1.09
CDX1-201ENST00000231656 PEX2P28328 305 aa21.86■■□□□ 1.09
CDX1-201ENST00000231656 HALP42357 657 aa21.86■■□□□ 1.09
CDX1-201ENST00000231656 FNTBP49356 437 aa21.86■■□□□ 1.09
CDX1-201ENST00000231656 RHDQ02161 417 aa21.86■■□□□ 1.09
CDX1-201ENST00000231656 PCDH1Q08174 1060 aa21.86■■□□□ 1.09
CDX1-201ENST00000231656 DMPKQ09013 629 aa21.86■■□□□ 1.09
CDX1-201ENST00000231656 NAE1Q13564 534 aa21.86■■□□□ 1.09
CDX1-201ENST00000231656 CACHD1Q5VU97 1274 aa21.86■■□□□ 1.09
CDX1-201ENST00000231656 LIPJQ5W064 366 aa21.86■■□□□ 1.09
CDX1-201ENST00000231656 METRNLQ641Q3 311 aa21.86■■□□□ 1.09
CDX1-201ENST00000231656 SUSD1Q6UWL2 747 aa21.86■■□□□ 1.09
CDX1-201ENST00000231656 KIAA2013Q8IYS2 634 aa21.86■■□□□ 1.09
CDX1-201ENST00000231656 TSACCQ96A04 125 aaPredicted RBP21.86■■□□□ 1.09
CDX1-201ENST00000231656 DUS3LQ96G46 650 aaKnown RBP21.86■■□□□ 1.09
CDX1-201ENST00000231656 HSPA12BQ96MM6 686 aa21.86■■□□□ 1.09
CDX1-201ENST00000231656 OR4K3Q96R72 315 aa21.86■■□□□ 1.09
CDX1-201ENST00000231656 OR52A5Q9H2C5 316 aa21.86■■□□□ 1.09
CDX1-201ENST00000231656 AASDHPPTQ9NRN7 309 aa21.86■■□□□ 1.09
CDX1-201ENST00000231656 SLAMF8Q9P0V8 285 aa21.86■■□□□ 1.09
CDX1-201ENST00000231656 CIDEBQ9UHD4 219 aa21.86■■□□□ 1.09
CDX1-201ENST00000231656 RIMS3Q9UJD0 308 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms