RNA–Protein interactions for RNA: ENST00000619555.4

TARDBP-221, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-221ENST00000619555 DDAH2O95865 285 aa10.68□□□□□ -0.7
TARDBP-221ENST00000619555 ALBP02768 609 aa10.68□□□□□ -0.7
TARDBP-221ENST00000619555 PIM1P11309 404 aaPredicted RBP10.68□□□□□ -0.7
TARDBP-221ENST00000619555 MGAT1P26572 445 aa10.68□□□□□ -0.7
TARDBP-221ENST00000619555 COL8A1P27658 744 aa10.68□□□□□ -0.7
TARDBP-221ENST00000619555 PSMB5P28074 263 aa10.68□□□□□ -0.7
TARDBP-221ENST00000619555 PAFAH1B1P43034 410 aa10.68□□□□□ -0.7
TARDBP-221ENST00000619555 EIF3BP55884 814 aaKnown RBP10.68□□□□□ -0.7
TARDBP-221ENST00000619555 YBX1P67809 324 aaKnown RBP10.68□□□□□ -0.7
TARDBP-221ENST00000619555 C2orf54Q08AI8 447 aa10.68□□□□□ -0.7
TARDBP-221ENST00000619555 AIMP2Q13155 320 aaKnown RBP10.68□□□□□ -0.7
TARDBP-221ENST00000619555 HIF1AQ16665 826 aa10.68□□□□□ -0.7
TARDBP-221ENST00000619555 TCTE1Q5JU00 501 aa10.68□□□□□ -0.7
TARDBP-221ENST00000619555 WASHC2DQ5SRD0 308 aa10.68□□□□□ -0.7
TARDBP-221ENST00000619555 RNASEH2BQ5TBB1 312 aaKnown RBP10.68□□□□□ -0.7
TARDBP-221ENST00000619555 LRRC8BQ6P9F7 803 aa10.68□□□□□ -0.7
TARDBP-221ENST00000619555 TTC23LQ6PF05 361 aa10.68□□□□□ -0.7
TARDBP-221ENST00000619555 KIRREL2Q6UWL6 708 aa10.68□□□□□ -0.7
TARDBP-221ENST00000619555 CES3Q6UWW8 571 aa10.68□□□□□ -0.7
TARDBP-221ENST00000619555 PARP9Q8IXQ6 854 aa10.68□□□□□ -0.7
TARDBP-221ENST00000619555 MPP5Q8N3R9 675 aa10.68□□□□□ -0.7
TARDBP-221ENST00000619555 NAT8LQ8N9F0 302 aa10.68□□□□□ -0.7
TARDBP-221ENST00000619555 TTC29Q8NA56 475 aaPredicted RBP10.68□□□□□ -0.7
TARDBP-221ENST00000619555 GSDMBQ8TAX9 411 aa10.68□□□□□ -0.7
TARDBP-221ENST00000619555 DENND1AQ8TEH3 1009 aa10.68□□□□□ -0.7
TARDBP-221ENST00000619555 SKA2Q8WVK7 121 aaPredicted RBP10.68□□□□□ -0.7
TARDBP-221ENST00000619555 TM9SF4Q92544 642 aa10.68□□□□□ -0.7
TARDBP-221ENST00000619555 ZUFSPQ96AP4 578 aa10.68□□□□□ -0.7
TARDBP-221ENST00000619555 FKBP10Q96AY3 582 aa10.68□□□□□ -0.7
TARDBP-221ENST00000619555 RAD51AP1Q96B01 352 aa10.68□□□□□ -0.7
TARDBP-221ENST00000619555 PANX3Q96QZ0 392 aa10.68□□□□□ -0.7
TARDBP-221ENST00000619555 MIPEPQ99797 713 aa10.68□□□□□ -0.7
TARDBP-221ENST00000619555 MESP1Q9BRJ9 268 aa10.68□□□□□ -0.7
TARDBP-221ENST00000619555 TRIM56Q9BRZ2 755 aaKnown RBP10.68□□□□□ -0.7
TARDBP-221ENST00000619555 SLC26A1Q9H2B4 701 aa10.68□□□□□ -0.7
TARDBP-221ENST00000619555 WDR54Q9H977 334 aa10.68□□□□□ -0.7
TARDBP-221ENST00000619555 STOX2Q9P2F5 926 aaPredicted RBP10.68□□□□□ -0.7
TARDBP-221ENST00000619555 RNF14Q9UBS8 474 aa10.68□□□□□ -0.7
TARDBP-221ENST00000619555 CTSFQ9UBX1 484 aa10.68□□□□□ -0.7
TARDBP-221ENST00000619555 GNPTGQ9UJJ9 305 aa10.68□□□□□ -0.7
TARDBP-221ENST00000619555 TSR3Q9UJK0 312 aaKnown RBP10.68□□□□□ -0.7
TARDBP-221ENST00000619555 PCDHGA10Q9Y5H3 936 aa10.68□□□□□ -0.7
TARDBP-221ENST00000619555 MAU2Q9Y6X3 613 aa10.68□□□□□ -0.7
TARDBP-221ENST00000619555 LOC105369274A0A096LPK9 316 aa10.67□□□□□ -0.7
TARDBP-221ENST00000619555 LOC102723532A0A0G2JNH3 316 aa10.67□□□□□ -0.7
TARDBP-221ENST00000619555 A0A0J9YVX5 310 aa10.67□□□□□ -0.7
TARDBP-221ENST00000619555 A0A1W2PPV9 198 aa10.67□□□□□ -0.7
TARDBP-221ENST00000619555 FITM1A5D6W6 292 aa10.67□□□□□ -0.7
TARDBP-221ENST00000619555 ANKUB1A6NFN9 424 aa10.67□□□□□ -0.7
TARDBP-221ENST00000619555 WIPF3A6NGB9 483 aa10.67□□□□□ -0.7
TARDBP-221ENST00000619555 TARM1B6A8C7 271 aa10.67□□□□□ -0.7
TARDBP-221ENST00000619555 GOLGA8KD6RF30 607 aa10.67□□□□□ -0.7
TARDBP-221ENST00000619555 GOLGA8TH3BQL2 631 aa10.67□□□□□ -0.7
TARDBP-221ENST00000619555 GOLGA8MH3BSY2 632 aa10.67□□□□□ -0.7
TARDBP-221ENST00000619555 CCDC188H7C350 402 aa10.67□□□□□ -0.7
TARDBP-221ENST00000619555 TP73O15350 636 aa10.67□□□□□ -0.7
TARDBP-221ENST00000619555 LDLRP01130 860 aa10.67□□□□□ -0.7
TARDBP-221ENST00000619555 RPS3P23396 243 aaKnown RBP eCLIP10.67□□□□□ -0.7
TARDBP-221ENST00000619555 FMO4P31512 558 aa10.67□□□□□ -0.7
TARDBP-221ENST00000619555 NPY2RP49146 381 aa10.67□□□□□ -0.7
TARDBP-221ENST00000619555 FASTKQ14296 549 aaKnown RBP10.67□□□□□ -0.7
TARDBP-221ENST00000619555 PPP1R7Q15435 360 aa10.67□□□□□ -0.7
TARDBP-221ENST00000619555 CTSL3PQ5NE16 218 aa10.67□□□□□ -0.7
TARDBP-221ENST00000619555 YOD1Q5VVQ6 348 aaPredicted RBP10.67□□□□□ -0.7
TARDBP-221ENST00000619555 PRAMEF13Q5VWM6 474 aa10.67□□□□□ -0.7
TARDBP-221ENST00000619555 FRMPD2BQ6IN97 320 aa10.67□□□□□ -0.7
TARDBP-221ENST00000619555 CNSTQ6PJW8 725 aa10.67□□□□□ -0.7
TARDBP-221ENST00000619555 OTOAQ7RTW8 1153 aa10.67□□□□□ -0.7
TARDBP-221ENST00000619555 OR4N4Q8N0Y3 316 aa10.67□□□□□ -0.7
TARDBP-221ENST00000619555 OTUD6BQ8N6M0 293 aa10.67□□□□□ -0.7
TARDBP-221ENST00000619555 SPATA4Q8NEY3 305 aa10.67□□□□□ -0.7
TARDBP-221ENST00000619555 NACC2Q96BF6 587 aa10.67□□□□□ -0.7
TARDBP-221ENST00000619555 FAM136AQ96C01 138 aa10.67□□□□□ -0.7
TARDBP-221ENST00000619555 TRIM44Q96DX7 344 aaPredicted RBP10.67□□□□□ -0.7
TARDBP-221ENST00000619555 SERPINB12Q96P63 405 aa10.67□□□□□ -0.7
TARDBP-221ENST00000619555 KRT12Q99456 494 aa10.67□□□□□ -0.7
TARDBP-221ENST00000619555 BARD1Q99728 777 aaKnown RBP10.67□□□□□ -0.7
TARDBP-221ENST00000619555 RAB11FIP5Q9BXF6 653 aa10.67□□□□□ -0.7
TARDBP-221ENST00000619555 ENAMQ9NRM1 1142 aa10.67□□□□□ -0.7
TARDBP-221ENST00000619555 BFARQ9NZS9 450 aa10.67□□□□□ -0.7
TARDBP-221ENST00000619555 CRYBG3Q68DQ2 2970 aa10.67□□□□□ -0.7
TARDBP-221ENST00000619555 CELSR2Q9HCU4 2923 aa10.66□□□□□ -0.7
TARDBP-221ENST00000619555 MYO7BQ6PIF6 2116 aa10.66□□□□□ -0.7
TARDBP-221ENST00000619555 HYKKA2RU49 373 aa10.66□□□□□ -0.7
TARDBP-221ENST00000619555 VSTM2BA6NLU5 285 aa10.66□□□□□ -0.7
TARDBP-221ENST00000619555 DNALI1O14645 258 aaPredicted RBP10.66□□□□□ -0.7
TARDBP-221ENST00000619555 SRPX2O60687 465 aaPredicted RBP10.66□□□□□ -0.7
TARDBP-221ENST00000619555 NIPSNAP2O75323 286 aa10.66□□□□□ -0.7
TARDBP-221ENST00000619555 VAPBO95292 243 aa10.66□□□□□ -0.7
TARDBP-221ENST00000619555 FKBP9O95302 570 aa10.66□□□□□ -0.7
TARDBP-221ENST00000619555 CLDN1O95832 211 aa10.66□□□□□ -0.7
TARDBP-221ENST00000619555 EIF2S1P05198 315 aaKnown RBP10.66□□□□□ -0.7
TARDBP-221ENST00000619555 ARNTP27540 789 aa10.66□□□□□ -0.7
TARDBP-221ENST00000619555 MAGEA3P43357 314 aa10.66□□□□□ -0.7
TARDBP-221ENST00000619555 CDK16Q00536 496 aa10.66□□□□□ -0.7
TARDBP-221ENST00000619555 DR1Q01658 176 aa10.66□□□□□ -0.7
TARDBP-221ENST00000619555 Q0VFX4 171 aa10.66□□□□□ -0.7
TARDBP-221ENST00000619555 RBBP7Q16576 425 aa10.66□□□□□ -0.7
TARDBP-221ENST00000619555 FAM214AQ32MH5 1076 aa10.66□□□□□ -0.7
TARDBP-221ENST00000619555 AGAP7PQ5VUJ5 663 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms