RNA–Protein interactions for RNA: ENST00000601236.1

U2AF1L4-221, Transcript of U2 small nuclear RNA auxiliary factor 1 like 4, human

TSL 3

Gene U2AF1L4, Length 455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
U2AF1L4-221	ENST00000601236	HAS3	O00219	553 aa		11.42	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	PPP6C	O00743	305 aa		11.42	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	OR7A17	O14581	309 aa		11.42	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	RFXANK	O14593	260 aa		11.42	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	SHOX	O15266	292 aa		11.42	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	GUCY1B2	O75343	617 aa		11.42	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	PGLS	O95336	258 aa		11.42	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	CLDN9	O95484	217 aa		11.42	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	HLA-DQB1	P01920	261 aa		11.42	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	SCG5	P05408	212 aa		11.42	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	PSMA1	P25786	263 aa	Known RBP	11.42	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	HOXA9	P31269	272 aa		11.42	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	HOXC8	P31273	242 aa		11.42	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	FMO4	P31512	558 aa		11.42	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	PCGF2	P35227	344 aa		11.42	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	KIR3DL1	P43629	444 aa		11.42	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	HMGA2	P52926	109 aa		11.42	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	MAPK10	P53779	464 aa		11.42	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	RPL38	P63173	70 aa	Known RBP	11.42	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	DSC2	Q02487	901 aa		11.42	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	SLC13A2	Q13183	592 aa		11.42	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	SP140	Q13342	867 aa		11.42	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	RIN1	Q13671	783 aa		11.42	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	C1D	Q13901	141 aa	Known RBP	11.42	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	DGCR6	Q14129	220 aa		11.42	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	NCF4	Q15080	339 aa		11.42	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	MAPK11	Q15759	364 aa		11.42	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	LRRC26	Q2I0M4	334 aa		11.42	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	RFTN2	Q52LD8	501 aa	Predicted RBP	11.42	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	C6orf183	Q5T699	404 aa		11.42	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	PPP2R2D	Q66LE6	453 aa		11.42	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	BICRAL	Q6AI39	1079 aa		11.42	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	ZCCHC8	Q6NZY4	707 aa	Known RBP	11.42	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	GCNT7	Q6ZNI0	430 aa		11.42	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	GPRIN1	Q7Z2K8	1008 aa		11.42	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	SPATA2L	Q8IUW3	424 aa	Predicted RBP	11.42	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	CCDC28A	Q8IWP9	274 aa		11.42	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	ENTHD1	Q8IYW4	607 aa		11.42	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	RBFA	Q8N0V3	343 aa		11.42	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	NATD1	Q8N6N6	113 aa		11.42	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	EFHB	Q8N7U6	833 aa		11.42	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	SPERT	Q8NA61	448 aa		11.42	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	GPRC5A	Q8NFJ5	357 aa		11.42	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	COPS5	Q92905	334 aa		11.42	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	ULK4	Q96C45	1275 aa		11.42	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	ST6GAL2	Q96JF0	529 aa		11.42	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	ZNF668	Q96K58	619 aa	Predicted RBP	11.42	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	OR2A14	Q96R47	310 aa		11.42	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	GDF15	Q99988	308 aa		11.42	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	LPIN3	Q9BQK8	851 aa		11.42	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	TTLL2	Q9BWV7	592 aa		11.42	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	REXO4	Q9GZR2	422 aa	Known RBP	11.42	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	KATNBL1	Q9H079	304 aa		11.42	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	P2RY12	Q9H244	342 aa		11.42	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	PDF	Q9HBH1	243 aa		11.42	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	SPON1	Q9HCB6	807 aa		11.42	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	SERHL	Q9NQF3	203 aa		11.42	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	ING3	Q9NXR8	418 aa		11.42	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	B3GNT2	Q9NY97	397 aa		11.42	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	NDOR1	Q9UHB4	597 aa		11.42	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	EIF2B4	Q9UI10	523 aa	Known RBP	11.42	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	VPS51	Q9UID3	782 aa		11.42	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	SCAF8	Q9UPN6	1271 aa	Known RBP	11.42	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	ZNF451	Q9Y4E5	1061 aa		11.42	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	PCDHB5	Q9Y5E4	795 aa		11.42	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	PCDHGA6	Q9Y5G7	932 aa		11.42	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	PTGDR2	Q9Y5Y4	395 aa		11.42	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	GBF1	Q92538	1859 aa		11.41	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	TUBAL3	A6NHL2	446 aa		11.41	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	SNTN	A6NMZ2	147 aa		11.41	□□□□□ -0.58
U2AF1L4-221	ENST00000601236		M0R082	166 aa		11.41	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	CDC7	O00311	574 aa		11.41	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	MANBA	O00462	879 aa		11.41	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	DSCR3	O14972	297 aa		11.41	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	BET1	O15155	118 aa		11.41	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	INSIG1	O15503	277 aa		11.41	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	SUV39H1	O43463	412 aa		11.41	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	PCDHGA12	O60330	932 aa		11.41	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	CYP7B1	O75881	506 aa		11.41	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	MFN2	O95140	757 aa		11.41	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	CRYZL1	O95825	349 aa		11.41	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	IGLV3-27	P01718	113 aa		11.41	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	C1QB	P02746	253 aa		11.41	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	MT-ND1	P03886	318 aa		11.41	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	SMIM10L2A	P0DMW4	78 aa		11.41	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	SMIM10L2B	P0DMW5	78 aa		11.41	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	PRKCA	P17252	672 aa		11.41	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	CYP2A7	P20853	494 aa		11.41	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	GAL	P22466	123 aa		11.41	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	CHM	P24386	653 aa		11.41	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	GADD45A	P24522	165 aa		11.41	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	AKAP5	P24588	427 aa		11.41	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	PTPN6	P29350	595 aa		11.41	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	FMO3	P31513	532 aa		11.41	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	LIPA	P38571	399 aa		11.41	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	MAP2K4	P45985	399 aa		11.41	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	CPT1A	P50416	773 aa		11.41	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	CLCN7	P51798	805 aa		11.41	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	SNRPG	P62308	76 aa	Known RBP	11.41	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	BAMBI	Q13145	260 aa		11.41	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms