RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 GPC4O75487 556 aa16.84■□□□□ 0.29
SHKBP1-203ENST00000594298 CLDN1O95832 211 aa16.84■□□□□ 0.29
SHKBP1-203ENST00000594298 RPN2P04844 631 aa16.84■□□□□ 0.29
SHKBP1-203ENST00000594298 PKMP14618 531 aaKnown RBP16.84■□□□□ 0.29
SHKBP1-203ENST00000594298 CHRM3P20309 590 aa16.84■□□□□ 0.29
SHKBP1-203ENST00000594298 AOAHP28039 575 aa16.84■□□□□ 0.29
SHKBP1-203ENST00000594298 PEBP1P30086 187 aaKnown RBP16.84■□□□□ 0.29
SHKBP1-203ENST00000594298 ELK3P41970 407 aa16.84■□□□□ 0.29
SHKBP1-203ENST00000594298 CAV1Q03135 178 aa16.84■□□□□ 0.29
SHKBP1-203ENST00000594298 CRYMQ14894 314 aa16.84■□□□□ 0.29
SHKBP1-203ENST00000594298 MSS51Q4VC12 460 aa16.84■□□□□ 0.29
SHKBP1-203ENST00000594298 CENPUQ71F23 418 aa16.84■□□□□ 0.29
SHKBP1-203ENST00000594298 OTOAQ7RTW8 1153 aa16.84■□□□□ 0.29
SHKBP1-203ENST00000594298 SLC22A15Q8IZD6 547 aa16.84■□□□□ 0.29
SHKBP1-203ENST00000594298 KRT222Q8N1A0 295 aa16.84■□□□□ 0.29
SHKBP1-203ENST00000594298 ZADH2Q8N4Q0 377 aa16.84■□□□□ 0.29
SHKBP1-203ENST00000594298 KIF18AQ8NI77 898 aa16.84■□□□□ 0.29
SHKBP1-203ENST00000594298 INPP5DQ92835 1189 aa16.84■□□□□ 0.29
SHKBP1-203ENST00000594298 NDC1Q9BTX1 674 aa16.84■□□□□ 0.29
SHKBP1-203ENST00000594298 ATP13A2Q9NQ11 1180 aa16.84■□□□□ 0.29
SHKBP1-203ENST00000594298 ZC3H7BQ9UGR2 993 aaKnown RBP16.84■□□□□ 0.29
SHKBP1-203ENST00000594298 CRYL1Q9Y2S2 319 aa16.84■□□□□ 0.29
SHKBP1-203ENST00000594298 TDRKHQ9Y2W6 561 aaKnown RBP16.84■□□□□ 0.29
SHKBP1-203ENST00000594298 PCDHGA10Q9Y5H3 936 aa16.84■□□□□ 0.29
SHKBP1-203ENST00000594298 MRFAP1Q9Y605 127 aa16.84■□□□□ 0.29
SHKBP1-203ENST00000594298 COMMD10Q9Y6G5 202 aa16.84■□□□□ 0.29
SHKBP1-203ENST00000594298 ANKUB1A6NFN9 424 aa16.83■□□□□ 0.28
SHKBP1-203ENST00000594298 IQCF5A8MTL0 148 aa16.83■□□□□ 0.28
SHKBP1-203ENST00000594298 ISM1B1AKI9 464 aa16.83■□□□□ 0.28
SHKBP1-203ENST00000594298 E5RI56 91 aa16.83■□□□□ 0.28
SHKBP1-203ENST00000594298 AGPSO00116 658 aa16.83■□□□□ 0.28
SHKBP1-203ENST00000594298 SLCO2B1O94956 709 aa16.83■□□□□ 0.28
SHKBP1-203ENST00000594298 ONECUT2O95948 504 aa16.83■□□□□ 0.28
SHKBP1-203ENST00000594298 S1PR4O95977 384 aa16.83■□□□□ 0.28
SHKBP1-203ENST00000594298 SPTBP11277 2137 aa16.83■□□□□ 0.28
SHKBP1-203ENST00000594298 CSE1LP55060 971 aaKnown RBP16.83■□□□□ 0.28
SHKBP1-203ENST00000594298 AIMP2Q13155 320 aaKnown RBP16.83■□□□□ 0.28
SHKBP1-203ENST00000594298 CTBP1Q13363 440 aa16.83■□□□□ 0.28
SHKBP1-203ENST00000594298 ESPL1Q14674 2120 aa16.83■□□□□ 0.28
SHKBP1-203ENST00000594298 CYP2A13Q16696 494 aa16.83■□□□□ 0.28
SHKBP1-203ENST00000594298 HSP90AA5PQ58FG0 334 aa16.83■□□□□ 0.28
SHKBP1-203ENST00000594298 DUPD1Q68J44 220 aa16.83■□□□□ 0.28
SHKBP1-203ENST00000594298 TTC23LQ6PF05 361 aa16.83■□□□□ 0.28
SHKBP1-203ENST00000594298 NAPRTQ6XQN6 538 aa16.83■□□□□ 0.28
SHKBP1-203ENST00000594298 DENND1AQ8TEH3 1009 aa16.83■□□□□ 0.28
SHKBP1-203ENST00000594298 DLG3Q92796 817 aa16.83■□□□□ 0.28
SHKBP1-203ENST00000594298 FKBP10Q96AY3 582 aa16.83■□□□□ 0.28
SHKBP1-203ENST00000594298 BIRC8Q96P09 236 aa16.83■□□□□ 0.28
SHKBP1-203ENST00000594298 DPH5Q9H2P9 285 aa16.83■□□□□ 0.28
SHKBP1-203ENST00000594298 ENAMQ9NRM1 1142 aa16.83■□□□□ 0.28
SHKBP1-203ENST00000594298 SLC22A11Q9NSA0 550 aa16.83■□□□□ 0.28
SHKBP1-203ENST00000594298 IARS2Q9NSE4 1012 aaKnown RBP16.83■□□□□ 0.28
SHKBP1-203ENST00000594298 EURLQ9NYK6 297 aa16.83■□□□□ 0.28
SHKBP1-203ENST00000594298 IL1RAPL1Q9NZN1 696 aa16.83■□□□□ 0.28
SHKBP1-203ENST00000594298 FBXO5Q9UKT4 447 aa16.83■□□□□ 0.28
SHKBP1-203ENST00000594298 COPG1Q9Y678 874 aaKnown RBP16.83■□□□□ 0.28
SHKBP1-203ENST00000594298 EIF3HO15372 352 aaKnown RBP eCLIP16.82■□□□□ 0.28
SHKBP1-203ENST00000594298 ALBP02768 609 aa16.82■□□□□ 0.28
SHKBP1-203ENST00000594298 MMP11P24347 488 aa16.82■□□□□ 0.28
SHKBP1-203ENST00000594298 PKLRP30613 574 aa16.82■□□□□ 0.28
SHKBP1-203ENST00000594298 RAB28P51157 221 aa16.82■□□□□ 0.28
SHKBP1-203ENST00000594298 ARSFP54793 590 aa16.82■□□□□ 0.28
SHKBP1-203ENST00000594298 FOXL2P58012 376 aa16.82■□□□□ 0.28
SHKBP1-203ENST00000594298 MRPS25P82663 173 aaKnown RBP16.82■□□□□ 0.28
SHKBP1-203ENST00000594298 PDIA2Q13087 525 aaKnown RBP16.82■□□□□ 0.28
SHKBP1-203ENST00000594298 CBLBQ13191 982 aa16.82■□□□□ 0.28
SHKBP1-203ENST00000594298 SLC9A5Q14940 896 aa16.82■□□□□ 0.28
SHKBP1-203ENST00000594298 CTSL3PQ5NE16 218 aa16.82■□□□□ 0.28
SHKBP1-203ENST00000594298 KIAA0408Q6ZU52 694 aa16.82■□□□□ 0.28
SHKBP1-203ENST00000594298 DENND6AQ8IWF6 608 aa16.82■□□□□ 0.28
SHKBP1-203ENST00000594298 LKAAEAR1Q8TD35 194 aa16.82■□□□□ 0.28
SHKBP1-203ENST00000594298 CFAP36Q96G28 342 aa16.82■□□□□ 0.28
SHKBP1-203ENST00000594298 C5orf34Q96MH7 638 aa16.82■□□□□ 0.28
SHKBP1-203ENST00000594298 FOPNLQ96NB1 174 aa16.82■□□□□ 0.28
SHKBP1-203ENST00000594298 MENTQ9BUN1 341 aa16.82■□□□□ 0.28
SHKBP1-203ENST00000594298 WDR54Q9H977 334 aa16.82■□□□□ 0.28
SHKBP1-203ENST00000594298 ZBTB20Q9HC78 741 aaPredicted RBP16.82■□□□□ 0.28
SHKBP1-203ENST00000594298 PPANQ9NQ55 473 aaKnown RBP16.82■□□□□ 0.28
SHKBP1-203ENST00000594298 IRAK4Q9NWZ3 460 aa16.82■□□□□ 0.28
SHKBP1-203ENST00000594298 PLAGL1Q9UM63 463 aa16.82■□□□□ 0.28
SHKBP1-203ENST00000594298 CHMP2BQ9UQN3 213 aa16.82■□□□□ 0.28
SHKBP1-203ENST00000594298 TEX264Q9Y6I9 313 aa16.82■□□□□ 0.28
SHKBP1-203ENST00000594298 A0A1B0GX78 115 aa16.81■□□□□ 0.28
SHKBP1-203ENST00000594298 E7ESA3 106 aa16.81■□□□□ 0.28
SHKBP1-203ENST00000594298 MASP2O00187 686 aa16.81■□□□□ 0.28
SHKBP1-203ENST00000594298 BANF1O75531 89 aa16.81■□□□□ 0.28
SHKBP1-203ENST00000594298 ITGAXP20702 1163 aa16.81■□□□□ 0.28
SHKBP1-203ENST00000594298 MAGP20916 626 aa16.81■□□□□ 0.28
SHKBP1-203ENST00000594298 DCTP40126 519 aa16.81■□□□□ 0.28
SHKBP1-203ENST00000594298 SLC1A2P43004 574 aa16.81■□□□□ 0.28
SHKBP1-203ENST00000594298 FRG1Q14331 258 aaKnown RBP16.81■□□□□ 0.28
SHKBP1-203ENST00000594298 TTLL9Q3SXZ7 439 aa16.81■□□□□ 0.28
SHKBP1-203ENST00000594298 C8orf74Q6P047 294 aa16.81■□□□□ 0.28
SHKBP1-203ENST00000594298 IGFL2Q6UWQ7 119 aa16.81■□□□□ 0.28
SHKBP1-203ENST00000594298 UNC5DQ6UXZ4 953 aa16.81■□□□□ 0.28
SHKBP1-203ENST00000594298 OVCH1Q7RTY7 1134 aa16.81■□□□□ 0.28
SHKBP1-203ENST00000594298 CUZD1Q86UP6 607 aa16.81■□□□□ 0.28
SHKBP1-203ENST00000594298 MCATQ8IVS2 390 aaKnown RBP16.81■□□□□ 0.28
SHKBP1-203ENST00000594298 IGDCC3Q8IVU1 814 aa16.81■□□□□ 0.28
SHKBP1-203ENST00000594298 TMEM151BQ8IW70 566 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 131.7 ms