RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 GRM7Q14831 915 aa16.54■□□□□ 0.24
RETREG3-210ENST00000590541 POU6F1Q14863 301 aa16.54■□□□□ 0.24
RETREG3-210ENST00000590541 BRD3Q15059 726 aa16.54■□□□□ 0.24
RETREG3-210ENST00000590541 NLRP9Q7RTR0 991 aa16.54■□□□□ 0.24
RETREG3-210ENST00000590541 SIRT6Q8N6T7 355 aa16.54■□□□□ 0.24
RETREG3-210ENST00000590541 CCDC89Q8N998 374 aa16.54■□□□□ 0.24
RETREG3-210ENST00000590541 LINC01555Q8NAE3 123 aa16.54■□□□□ 0.24
RETREG3-210ENST00000590541 PEX13Q92968 403 aa16.54■□□□□ 0.24
RETREG3-210ENST00000590541 C14orf79Q96F83 325 aa16.54■□□□□ 0.24
RETREG3-210ENST00000590541 ZNF285Q96NJ3 590 aa16.54■□□□□ 0.24
RETREG3-210ENST00000590541 TTC1Q99614 292 aa16.54■□□□□ 0.24
RETREG3-210ENST00000590541 ETNK1Q9HBU6 452 aa16.54■□□□□ 0.24
RETREG3-210ENST00000590541 DRG1Q9Y295 367 aaKnown RBP16.54■□□□□ 0.24
RETREG3-210ENST00000590541 PRSS21Q9Y6M0 314 aa16.54■□□□□ 0.24
RETREG3-210ENST00000590541 AP3B1O00203 1094 aa16.53■□□□□ 0.24
RETREG3-210ENST00000590541 MAP2K7O14733 419 aa16.53■□□□□ 0.24
RETREG3-210ENST00000590541 RASAL1O95294 804 aa16.53■□□□□ 0.24
RETREG3-210ENST00000590541 MED26O95402 600 aa16.53■□□□□ 0.24
RETREG3-210ENST00000590541 IFNB1P01574 187 aa16.53■□□□□ 0.24
RETREG3-210ENST00000590541 CRYABP02511 175 aaKnown RBP16.53■□□□□ 0.24
RETREG3-210ENST00000590541 COX6A1P12074 109 aa16.53■□□□□ 0.24
RETREG3-210ENST00000590541 PKLRP30613 574 aa16.53■□□□□ 0.24
RETREG3-210ENST00000590541 GRIA3P42263 894 aa16.53■□□□□ 0.24
RETREG3-210ENST00000590541 NSG1P42857 185 aa16.53■□□□□ 0.24
RETREG3-210ENST00000590541 ITIH4Q14624 930 aa16.53■□□□□ 0.24
RETREG3-210ENST00000590541 NAPRTQ6XQN6 538 aa16.53■□□□□ 0.24
RETREG3-210ENST00000590541 PPP1R21Q6ZMI0 780 aa16.53■□□□□ 0.24
RETREG3-210ENST00000590541 TAS2R42Q7RTR8 314 aa16.53■□□□□ 0.24
RETREG3-210ENST00000590541 PRSS58Q8IYP2 241 aa16.53■□□□□ 0.24
RETREG3-210ENST00000590541 LMNTD1Q8N9Z9 388 aa16.53■□□□□ 0.24
RETREG3-210ENST00000590541 DNAJB8Q8NHS0 232 aa16.53■□□□□ 0.24
RETREG3-210ENST00000590541 STT3BQ8TCJ2 826 aa16.53■□□□□ 0.24
RETREG3-210ENST00000590541 MTFMTQ96DP5 389 aaKnown RBP16.53■□□□□ 0.24
RETREG3-210ENST00000590541 MENTQ9BUN1 341 aa16.53■□□□□ 0.24
RETREG3-210ENST00000590541 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.53■□□□□ 0.24
RETREG3-210ENST00000590541 LZTFL1Q9NQ48 299 aa16.53■□□□□ 0.24
RETREG3-210ENST00000590541 HOMER3Q9NSC5 361 aa16.53■□□□□ 0.24
RETREG3-210ENST00000590541 IL1RAPL1Q9NZN1 696 aa16.53■□□□□ 0.24
RETREG3-210ENST00000590541 NSG1A0A0A6YYJ2 146 aa16.52■□□□□ 0.24
RETREG3-210ENST00000590541 SLC5A10A0PJK1 596 aa16.52■□□□□ 0.24
RETREG3-210ENST00000590541 FITM1A5D6W6 292 aa16.52■□□□□ 0.24
RETREG3-210ENST00000590541 SLC19A2O60779 497 aa16.52■□□□□ 0.24
RETREG3-210ENST00000590541 ZGLP1P0C6A0 271 aa16.52■□□□□ 0.24
RETREG3-210ENST00000590541 FDXRP22570 491 aa16.52■□□□□ 0.24
RETREG3-210ENST00000590541 ADRA1DP25100 572 aa16.52■□□□□ 0.24
RETREG3-210ENST00000590541 PPARGP37231 505 aaPredicted RBP16.52■□□□□ 0.24
RETREG3-210ENST00000590541 RBPJQ06330 500 aa16.52■□□□□ 0.24
RETREG3-210ENST00000590541 C3AR1Q16581 482 aa16.52■□□□□ 0.24
RETREG3-210ENST00000590541 DBN1Q16643 649 aa16.52■□□□□ 0.24
RETREG3-210ENST00000590541 TCTE1Q5JU00 501 aa16.52■□□□□ 0.24
RETREG3-210ENST00000590541 PACS1Q6VY07 963 aa16.52■□□□□ 0.24
RETREG3-210ENST00000590541 NDUFAF7Q7L592 441 aa16.52■□□□□ 0.24
RETREG3-210ENST00000590541 PIANPQ8IYJ0 282 aa16.52■□□□□ 0.24
RETREG3-210ENST00000590541 TTC29Q8NA56 475 aaPredicted RBP16.52■□□□□ 0.24
RETREG3-210ENST00000590541 OR52K1Q8NGK4 314 aa16.52■□□□□ 0.24
RETREG3-210ENST00000590541 ADAMTS18Q8TE60 1221 aa16.52■□□□□ 0.24
RETREG3-210ENST00000590541 C1orf54Q8WWF1 131 aa16.52■□□□□ 0.24
RETREG3-210ENST00000590541 ELMO1Q92556 727 aa16.52■□□□□ 0.24
RETREG3-210ENST00000590541 MIEF2Q96C03 454 aa16.52■□□□□ 0.24
RETREG3-210ENST00000590541 RAB6BQ9NRW1 208 aa16.52■□□□□ 0.24
RETREG3-210ENST00000590541 TINAGQ9UJW2 476 aa16.52■□□□□ 0.24
RETREG3-210ENST00000590541 C3orf18Q9UK00 162 aa16.52■□□□□ 0.24
RETREG3-210ENST00000590541 MRPS2Q9Y399 296 aaKnown RBP16.52■□□□□ 0.24
RETREG3-210ENST00000590541 CLDN14O95500 239 aa16.51■□□□□ 0.23
RETREG3-210ENST00000590541 WDPCPO95876 746 aa16.51■□□□□ 0.23
RETREG3-210ENST00000590541 SERPINA7P05543 415 aa16.51■□□□□ 0.23
RETREG3-210ENST00000590541 CELA2AP08217 269 aa16.51■□□□□ 0.23
RETREG3-210ENST00000590541 MSNP26038 577 aaKnown RBP16.51■□□□□ 0.23
RETREG3-210ENST00000590541 RAB28P51157 221 aa16.51■□□□□ 0.23
RETREG3-210ENST00000590541 SMSP52788 366 aa16.51■□□□□ 0.23
RETREG3-210ENST00000590541 PLOD1Q02809 727 aaPredicted RBP16.51■□□□□ 0.23
RETREG3-210ENST00000590541 ZC3H12BQ5HYM0 836 aaKnown RBP16.51■□□□□ 0.23
RETREG3-210ENST00000590541 FIGLAQ6QHK4 219 aa16.51■□□□□ 0.23
RETREG3-210ENST00000590541 LAPTM4BQ86VI4 370 aa16.51■□□□□ 0.23
RETREG3-210ENST00000590541 C2orf73Q8N5S3 287 aaPredicted RBP16.51■□□□□ 0.23
RETREG3-210ENST00000590541 AMER2Q8N7J2 671 aa16.51■□□□□ 0.23
RETREG3-210ENST00000590541 ZNF304Q9HCX3 659 aa16.51■□□□□ 0.23
RETREG3-210ENST00000590541 EIF2B3Q9NR50 452 aaKnown RBP16.51■□□□□ 0.23
RETREG3-210ENST00000590541 SMARCAL1Q9NZC9 954 aa16.51■□□□□ 0.23
RETREG3-210ENST00000590541 CPAMD8Q8IZJ3 1885 aa16.5■□□□□ 0.23
RETREG3-210ENST00000590541 PCNX1Q96RV3 2341 aa16.5■□□□□ 0.23
RETREG3-210ENST00000590541 A0A1W2PQ72 361 aa16.5■□□□□ 0.23
RETREG3-210ENST00000590541 KDM1AO60341 852 aa16.5■□□□□ 0.23
RETREG3-210ENST00000590541 BMP10O95393 424 aa16.5■□□□□ 0.23
RETREG3-210ENST00000590541 FTH1P02794 183 aa16.5■□□□□ 0.23
RETREG3-210ENST00000590541 APRTP07741 180 aa16.5■□□□□ 0.23
RETREG3-210ENST00000590541 ESRRAP11474 423 aaPredicted RBP16.5■□□□□ 0.23
RETREG3-210ENST00000590541 CASP6P55212 293 aa16.5■□□□□ 0.23
RETREG3-210ENST00000590541 PMP22Q01453 160 aa16.5■□□□□ 0.23
RETREG3-210ENST00000590541 OCA2Q04671 838 aa16.5■□□□□ 0.23
RETREG3-210ENST00000590541 TLE4Q04727 773 aa16.5■□□□□ 0.23
RETREG3-210ENST00000590541 ACVR1Q04771 509 aa16.5■□□□□ 0.23
RETREG3-210ENST00000590541 SNX1Q13596 522 aa16.5■□□□□ 0.23
RETREG3-210ENST00000590541 FAM214AQ32MH5 1076 aa16.5■□□□□ 0.23
RETREG3-210ENST00000590541 TSTD2Q5T7W7 516 aa16.5■□□□□ 0.23
RETREG3-210ENST00000590541 HIBCHQ6NVY1 386 aaPredicted RBP16.5■□□□□ 0.23
RETREG3-210ENST00000590541 AFTPHQ6ULP2 937 aa16.5■□□□□ 0.23
RETREG3-210ENST00000590541 TAX1BP1Q86VP1 789 aa16.5■□□□□ 0.23
RETREG3-210ENST00000590541 CEP97Q8IW35 865 aa16.5■□□□□ 0.23
RETREG3-210ENST00000590541 ACBD4Q8NC06 268 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms