RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 ANKRD54Q6NXT1 300 aa17.56■□□□□ 0.4
SMPD3-211ENST00000568373 ADAMTSL4Q6UY14 1074 aa17.56■□□□□ 0.4
SMPD3-211ENST00000568373 TRMT11Q7Z4G4 463 aaKnown RBP17.56■□□□□ 0.4
SMPD3-211ENST00000568373 TBC1D21Q8IYX1 336 aa17.56■□□□□ 0.4
SMPD3-211ENST00000568373 ST13P4Q8IZP2 240 aaPredicted RBP17.56■□□□□ 0.4
SMPD3-211ENST00000568373 PLA2G15Q8NCC3 412 aa17.56■□□□□ 0.4
SMPD3-211ENST00000568373 OR2T12Q8NG77 320 aa17.56■□□□□ 0.4
SMPD3-211ENST00000568373 COX14Q96I36 57 aa17.56■□□□□ 0.4
SMPD3-211ENST00000568373 EGLN2Q96KS0 407 aa17.56■□□□□ 0.4
SMPD3-211ENST00000568373 OSBPL11Q9BXB4 747 aa17.56■□□□□ 0.4
SMPD3-211ENST00000568373 PAIP1Q9H074 479 aaKnown RBP17.56■□□□□ 0.4
SMPD3-211ENST00000568373 KCNH6Q9H252 994 aa17.56■□□□□ 0.4
SMPD3-211ENST00000568373 RMND5AQ9H871 391 aa17.56■□□□□ 0.4
SMPD3-211ENST00000568373 BRF2Q9HAW0 419 aa17.56■□□□□ 0.4
SMPD3-211ENST00000568373 SGK2Q9HBY8 427 aa17.56■□□□□ 0.4
SMPD3-211ENST00000568373 AP3M1Q9Y2T2 418 aa17.56■□□□□ 0.4
SMPD3-211ENST00000568373 PCDHGA11Q9Y5H2 935 aa17.56■□□□□ 0.4
SMPD3-211ENST00000568373 STON1Q9Y6Q2 735 aa17.56■□□□□ 0.4
SMPD3-211ENST00000568373 EYSQ5T1H1 3165 aa17.56■□□□□ 0.4
SMPD3-211ENST00000568373 A0A096LPI6 279 aa17.56■□□□□ 0.4
SMPD3-211ENST00000568373 FAM149AA5PLN7 773 aa17.56■□□□□ 0.4
SMPD3-211ENST00000568373 CCT8P50990 548 aa17.56■□□□□ 0.4
SMPD3-211ENST00000568373 TBPL1P62380 186 aa17.56■□□□□ 0.4
SMPD3-211ENST00000568373 DDX39BQ13838 428 aaKnown RBP17.56■□□□□ 0.4
SMPD3-211ENST00000568373 LRIF1Q5T3J3 769 aa17.56■□□□□ 0.4
SMPD3-211ENST00000568373 INTS11Q5TA45 600 aaKnown RBP17.56■□□□□ 0.4
SMPD3-211ENST00000568373 CAPN13Q6MZZ7 669 aaPredicted RBP17.56■□□□□ 0.4
SMPD3-211ENST00000568373 C11orf96Q7Z7L8 435 aa17.56■□□□□ 0.4
SMPD3-211ENST00000568373 SYTL1Q8IYJ3 562 aa17.56■□□□□ 0.4
SMPD3-211ENST00000568373 OR10A6Q8NH74 314 aa17.56■□□□□ 0.4
SMPD3-211ENST00000568373 NEIL2Q969S2 332 aa17.56■□□□□ 0.4
SMPD3-211ENST00000568373 MRPL38Q96DV4 380 aaKnown RBP17.56■□□□□ 0.4
SMPD3-211ENST00000568373 METTL2AQ96IZ6 378 aaKnown RBP17.56■□□□□ 0.4
SMPD3-211ENST00000568373 ITCHQ96J02 903 aa17.56■□□□□ 0.4
SMPD3-211ENST00000568373 EBPLQ9BY08 206 aa17.56■□□□□ 0.4
SMPD3-211ENST00000568373 OSBPL6Q9BZF3 934 aa17.56■□□□□ 0.4
SMPD3-211ENST00000568373 PCDHB14Q9Y5E9 798 aa17.56■□□□□ 0.4
SMPD3-211ENST00000568373 MGAT4DA6NG13 374 aa17.55■□□□□ 0.4
SMPD3-211ENST00000568373 RFXAPO00287 272 aa17.55■□□□□ 0.4
SMPD3-211ENST00000568373 SOCS2O14508 198 aa17.55■□□□□ 0.4
SMPD3-211ENST00000568373 LRATO95237 230 aa17.55■□□□□ 0.4
SMPD3-211ENST00000568373 APODP05090 189 aa17.55■□□□□ 0.4
SMPD3-211ENST00000568373 ANXA6P08133 673 aa17.55■□□□□ 0.4
SMPD3-211ENST00000568373 PRPS1L1P21108 318 aa17.55■□□□□ 0.4
SMPD3-211ENST00000568373 GDI1P31150 447 aa17.55■□□□□ 0.4
SMPD3-211ENST00000568373 NFE2L1Q14494 772 aa17.55■□□□□ 0.4
SMPD3-211ENST00000568373 PGS1Q32NB8 556 aa17.55■□□□□ 0.4
SMPD3-211ENST00000568373 GTDC1Q4AE62 458 aa17.55■□□□□ 0.4
SMPD3-211ENST00000568373 SLCO4C1Q6ZQN7 724 aa17.55■□□□□ 0.4
SMPD3-211ENST00000568373 EPHX4Q8IUS5 362 aa17.55■□□□□ 0.4
SMPD3-211ENST00000568373 PACRGLQ8N7B6 248 aa17.55■□□□□ 0.4
SMPD3-211ENST00000568373 ZNF548Q8NEK5 533 aaPredicted RBP17.55■□□□□ 0.4
SMPD3-211ENST00000568373 TNIP2Q8NFZ5 429 aa17.55■□□□□ 0.4
SMPD3-211ENST00000568373 OR9A1PQ8NGU1 263 aa17.55■□□□□ 0.4
SMPD3-211ENST00000568373 TRPM6Q9BX84 2022 aa17.55■□□□□ 0.4
SMPD3-211ENST00000568373 SLC6A13Q9NSD5 602 aa17.55■□□□□ 0.4
SMPD3-211ENST00000568373 MSRAQ9UJ68 235 aa17.55■□□□□ 0.4
SMPD3-211ENST00000568373 RUVBL1Q9Y265 456 aaKnown RBP17.55■□□□□ 0.4
SMPD3-211ENST00000568373 UNC80Q8N2C7 3258 aa17.54■□□□□ 0.4
SMPD3-211ENST00000568373 SAC3D1A6NKF1 404 aa17.54■□□□□ 0.4
SMPD3-211ENST00000568373 PRMT3O60678 531 aa17.54■□□□□ 0.4
SMPD3-211ENST00000568373 GMNNO75496 209 aa17.54■□□□□ 0.4
SMPD3-211ENST00000568373 ACADLP28330 430 aa17.54■□□□□ 0.4
SMPD3-211ENST00000568373 POLE2P56282 527 aa17.54■□□□□ 0.4
SMPD3-211ENST00000568373 HYAL1Q12794 435 aa17.54■□□□□ 0.4
SMPD3-211ENST00000568373 ENPP2Q13822 863 aa17.54■□□□□ 0.4
SMPD3-211ENST00000568373 AGBL4Q5VU57 503 aa17.54■□□□□ 0.4
SMPD3-211ENST00000568373 PNCKQ6P2M8 343 aa17.54■□□□□ 0.4
SMPD3-211ENST00000568373 MSANTD1Q6ZTZ1 278 aa17.54■□□□□ 0.4
SMPD3-211ENST00000568373 NUDT18Q6ZVK8 323 aa17.54■□□□□ 0.4
SMPD3-211ENST00000568373 GPR180Q86V85 440 aa17.54■□□□□ 0.4
SMPD3-211ENST00000568373 HEATR4Q86WZ0 1026 aa17.54■□□□□ 0.4
SMPD3-211ENST00000568373 CACUL1Q86Y37 369 aa17.54■□□□□ 0.4
SMPD3-211ENST00000568373 SYT12Q8IV01 421 aa17.54■□□□□ 0.4
SMPD3-211ENST00000568373 CHPFQ8IZ52 775 aa17.54■□□□□ 0.4
SMPD3-211ENST00000568373 PHC3Q8NDX5 983 aa17.54■□□□□ 0.4
SMPD3-211ENST00000568373 OR7G3Q8NG95 312 aa17.54■□□□□ 0.4
SMPD3-211ENST00000568373 ELSPBP1Q96BH3 223 aa17.54■□□□□ 0.4
SMPD3-211ENST00000568373 C11orf24Q96F05 449 aaPredicted RBP17.54■□□□□ 0.4
SMPD3-211ENST00000568373 RSPH9Q9H1X1 276 aaPredicted RBP17.54■□□□□ 0.4
SMPD3-211ENST00000568373 GORASP2Q9H8Y8 452 aa17.54■□□□□ 0.4
SMPD3-211ENST00000568373 ITM2CQ9NQX7 267 aa17.54■□□□□ 0.4
SMPD3-211ENST00000568373 PCDHGB4Q9UN71 923 aa17.54■□□□□ 0.4
SMPD3-211ENST00000568373 INVSQ9Y283 1065 aa17.54■□□□□ 0.4
SMPD3-211ENST00000568373 TMEM98Q9Y2Y6 226 aa17.54■□□□□ 0.4
SMPD3-211ENST00000568373 PCDHGB5Q9Y5G0 923 aa17.54■□□□□ 0.4
SMPD3-211ENST00000568373 PCYT1BQ9Y5K3 369 aaPredicted RBP17.54■□□□□ 0.4
SMPD3-211ENST00000568373 XIRP2A4UGR9 3374 aa17.54■□□□□ 0.4
SMPD3-211ENST00000568373 IGLON5A6NGN9 336 aa17.54■□□□□ 0.4
SMPD3-211ENST00000568373 MID1O15344 667 aa17.54■□□□□ 0.4
SMPD3-211ENST00000568373 CDH1P12830 882 aa17.54■□□□□ 0.4
SMPD3-211ENST00000568373 HOXB9P17482 250 aaPredicted RBP17.54■□□□□ 0.4
SMPD3-211ENST00000568373 WASP42768 502 aa17.54■□□□□ 0.4
SMPD3-211ENST00000568373 TAS2R38P59533 333 aa17.54■□□□□ 0.4
SMPD3-211ENST00000568373 ACSM2AQ08AH3 577 aa17.54■□□□□ 0.4
SMPD3-211ENST00000568373 MTAPQ13126 283 aa17.54■□□□□ 0.4
SMPD3-211ENST00000568373 GK3PQ14409 553 aa17.54■□□□□ 0.4
SMPD3-211ENST00000568373 CST6Q15828 149 aa17.54■□□□□ 0.4
SMPD3-211ENST00000568373 DPY19L1Q2PZI1 675 aa17.54■□□□□ 0.4
SMPD3-211ENST00000568373 ITPRIPL2Q3MIP1 535 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms