RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 BNC2Q6ZN30 1099 aaPredicted RBP13.34□□□□□ -0.27
TPM1-215ENST00000558868 SLCO4C1Q6ZQN7 724 aa13.34□□□□□ -0.27
TPM1-215ENST00000558868 ABI3BPQ7Z7G0 1075 aa13.34□□□□□ -0.27
TPM1-215ENST00000558868 LRRC56Q8IYG6 542 aaPredicted RBP13.34□□□□□ -0.27
TPM1-215ENST00000558868 TMEM145Q8NBT3 493 aa13.34□□□□□ -0.27
TPM1-215ENST00000558868 PPFIBP2Q8ND30 876 aa13.34□□□□□ -0.27
TPM1-215ENST00000558868 HMGCLL1Q8TB92 370 aa13.34□□□□□ -0.27
TPM1-215ENST00000558868 SLC5A11Q8WWX8 675 aa13.34□□□□□ -0.27
TPM1-215ENST00000558868 OR1E3Q8WZA6 343 aa13.34□□□□□ -0.27
TPM1-215ENST00000558868 MTFMTQ96DP5 389 aaKnown RBP13.34□□□□□ -0.27
TPM1-215ENST00000558868 INSM2Q96T92 566 aaPredicted RBP13.34□□□□□ -0.27
TPM1-215ENST00000558868 C1orf50Q9BV19 199 aa13.34□□□□□ -0.27
TPM1-215ENST00000558868 C6orf106Q9H6K1 298 aaPredicted RBP13.34□□□□□ -0.27
TPM1-215ENST00000558868 WDR41Q9HAD4 459 aa13.34□□□□□ -0.27
TPM1-215ENST00000558868 FARSBQ9NSD9 589 aaKnown RBP13.34□□□□□ -0.27
TPM1-215ENST00000558868 GID8Q9NWU2 228 aa13.34□□□□□ -0.27
TPM1-215ENST00000558868 TRNAU1APQ9NX07 287 aaKnown RBP13.34□□□□□ -0.27
TPM1-215ENST00000558868 CIDEBQ9UHD4 219 aa13.34□□□□□ -0.27
TPM1-215ENST00000558868 COLEC10Q9Y6Z7 277 aa13.34□□□□□ -0.27
TPM1-215ENST00000558868 A0A088AWK7 358 aa13.33□□□□□ -0.28
TPM1-215ENST00000558868 ATP6V1G2O95670 118 aa13.33□□□□□ -0.28
TPM1-215ENST00000558868 TNFP01375 233 aa13.33□□□□□ -0.28
TPM1-215ENST00000558868 IGHV4-34P06331 123 aa13.33□□□□□ -0.28
TPM1-215ENST00000558868 CXCR2P25025 360 aa13.33□□□□□ -0.28
TPM1-215ENST00000558868 RPL10P27635 214 aaKnown RBP13.33□□□□□ -0.28
TPM1-215ENST00000558868 POLR2JP52435 117 aaKnown RBP13.33□□□□□ -0.28
TPM1-215ENST00000558868 SRP54P61011 504 aaKnown RBP13.33□□□□□ -0.28
TPM1-215ENST00000558868 TFF2Q03403 129 aa13.33□□□□□ -0.28
TPM1-215ENST00000558868 FZD5Q13467 585 aa13.33□□□□□ -0.28
TPM1-215ENST00000558868 FAM219BQ5XKK7 198 aa13.33□□□□□ -0.28
TPM1-215ENST00000558868 PGM2L1Q6PCE3 622 aa13.33□□□□□ -0.28
TPM1-215ENST00000558868 NXPE4Q6UWF7 544 aa13.33□□□□□ -0.28
TPM1-215ENST00000558868 Q6ZSR6 202 aa13.33□□□□□ -0.28
TPM1-215ENST00000558868 TMPRSS11BQ86T26 416 aa13.33□□□□□ -0.28
TPM1-215ENST00000558868 DCP2Q8IU60 420 aaKnown RBP13.33□□□□□ -0.28
TPM1-215ENST00000558868 FUNDC1Q8IVP5 155 aa13.33□□□□□ -0.28
TPM1-215ENST00000558868 SIX5Q8N196 739 aa13.33□□□□□ -0.28
TPM1-215ENST00000558868 KRT78Q8N1N4 520 aa13.33□□□□□ -0.28
TPM1-215ENST00000558868 FBXW8Q8N3Y1 598 aa13.33□□□□□ -0.28
TPM1-215ENST00000558868 SPEM1Q8N4L4 309 aa13.33□□□□□ -0.28
TPM1-215ENST00000558868 GLB1L3Q8NCI6 653 aaPredicted RBP13.33□□□□□ -0.28
TPM1-215ENST00000558868 WDR20Q8TBZ3 569 aa13.33□□□□□ -0.28
TPM1-215ENST00000558868 NEIL2Q969S2 332 aa13.33□□□□□ -0.28
TPM1-215ENST00000558868 SH3KBP1Q96B97 665 aa13.33□□□□□ -0.28
TPM1-215ENST00000558868 SPDL1Q96EA4 605 aa13.33□□□□□ -0.28
TPM1-215ENST00000558868 CAMK1GQ96NX5 476 aa13.33□□□□□ -0.28
TPM1-215ENST00000558868 HHIPQ96QV1 700 aa13.33□□□□□ -0.28
TPM1-215ENST00000558868 HBEGFQ99075 208 aa13.33□□□□□ -0.28
TPM1-215ENST00000558868 NPAS2Q99743 824 aa13.33□□□□□ -0.28
TPM1-215ENST00000558868 IER2Q9BTL4 223 aa13.33□□□□□ -0.28
TPM1-215ENST00000558868 GPR174Q9BXC1 333 aa13.33□□□□□ -0.28
TPM1-215ENST00000558868 ACPTQ9BZG2 426 aa13.33□□□□□ -0.28
TPM1-215ENST00000558868 PELI2Q9HAT8 420 aa13.33□□□□□ -0.28
TPM1-215ENST00000558868 IMP3Q9NV31 184 aaKnown RBP13.33□□□□□ -0.28
TPM1-215ENST00000558868 BCAP29Q9UHQ4 241 aa13.33□□□□□ -0.28
TPM1-215ENST00000558868 BAIAP2L1Q9UHR4 511 aa13.33□□□□□ -0.28
TPM1-215ENST00000558868 ADGRE2Q9UHX3 823 aa13.33□□□□□ -0.28
TPM1-215ENST00000558868 CROTQ9UKG9 612 aa13.33□□□□□ -0.28
TPM1-215ENST00000558868 POLR3HQ9Y535 204 aaPredicted RBP13.33□□□□□ -0.28
TPM1-215ENST00000558868 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.33□□□□□ -0.28
TPM1-215ENST00000558868 A0A1W2PP18 115 aa13.32□□□□□ -0.28
TPM1-215ENST00000558868 CCDC154A6NI56 674 aa13.32□□□□□ -0.28
TPM1-215ENST00000558868 C19orf67A6NJJ6 358 aa13.32□□□□□ -0.28
TPM1-215ENST00000558868 FBP2O00757 339 aa13.32□□□□□ -0.28
TPM1-215ENST00000558868 PRAMEF4O60810 478 aa13.32□□□□□ -0.28
TPM1-215ENST00000558868 NDUFS2O75306 463 aa13.32□□□□□ -0.28
TPM1-215ENST00000558868 MYO1DO94832 1006 aa13.32□□□□□ -0.28
TPM1-215ENST00000558868 NPPAP01160 153 aa13.32□□□□□ -0.28
TPM1-215ENST00000558868 G6PDP11413 515 aa13.32□□□□□ -0.28
TPM1-215ENST00000558868 MTHFD1P11586 935 aaKnown RBP13.32□□□□□ -0.28
TPM1-215ENST00000558868 JAK1P23458 1154 aa13.32□□□□□ -0.28
TPM1-215ENST00000558868 NME5P56597 212 aa13.32□□□□□ -0.28
TPM1-215ENST00000558868 PSME3P61289 254 aa13.32□□□□□ -0.28
TPM1-215ENST00000558868 HMGCS1Q01581 520 aa13.32□□□□□ -0.28
TPM1-215ENST00000558868 FOXM1Q08050 763 aa13.32□□□□□ -0.28
TPM1-215ENST00000558868 RCAN2Q14206 197 aa13.32□□□□□ -0.28
TPM1-215ENST00000558868 RFTN2Q52LD8 501 aaPredicted RBP13.32□□□□□ -0.28
TPM1-215ENST00000558868 TMEM31Q5JXX7 168 aa13.32□□□□□ -0.28
TPM1-215ENST00000558868 PRAMEF9Q5VWM5 478 aa13.32□□□□□ -0.28
TPM1-215ENST00000558868 ABRAXAS1Q6UWZ7 409 aa13.32□□□□□ -0.28
TPM1-215ENST00000558868 C17orf64Q86WR6 236 aa13.32□□□□□ -0.28
TPM1-215ENST00000558868 CAMKK1Q8N5S9 505 aa13.32□□□□□ -0.28
TPM1-215ENST00000558868 OR9I1Q8NGQ6 314 aa13.32□□□□□ -0.28
TPM1-215ENST00000558868 STMN2Q93045 179 aa13.32□□□□□ -0.28
TPM1-215ENST00000558868 HOPXQ9BPY8 73 aaPredicted RBP13.32□□□□□ -0.28
TPM1-215ENST00000558868 PITHD1Q9GZP4 211 aaPredicted RBP13.32□□□□□ -0.28
TPM1-215ENST00000558868 CHRDQ9H2X0 955 aa13.32□□□□□ -0.28
TPM1-215ENST00000558868 DENND2DQ9H6A0 471 aaPredicted RBP13.32□□□□□ -0.28
TPM1-215ENST00000558868 TBC1D17Q9HA65 648 aa13.32□□□□□ -0.28
TPM1-215ENST00000558868 PRM3Q9NNZ6 103 aa13.32□□□□□ -0.28
TPM1-215ENST00000558868 VPS29Q9UBQ0 182 aa13.32□□□□□ -0.28
TPM1-215ENST00000558868 LEF1Q9UJU2 399 aaPredicted RBP13.32□□□□□ -0.28
TPM1-215ENST00000558868 PCOLCE2Q9UKZ9 415 aa13.32□□□□□ -0.28
TPM1-215ENST00000558868 MAPRE3Q9UPY8 281 aa13.32□□□□□ -0.28
TPM1-215ENST00000558868 WDR37Q9Y2I8 494 aa13.32□□□□□ -0.28
TPM1-215ENST00000558868 TSC22D4Q9Y3Q8 395 aa13.32□□□□□ -0.28
TPM1-215ENST00000558868 DGKBQ9Y6T7 804 aa13.32□□□□□ -0.28
TPM1-215ENST00000558868 IGHV1OR15-9A0A0B4J2B8 117 aa13.31□□□□□ -0.28
TPM1-215ENST00000558868 A0A1W2PPC4 97 aa13.31□□□□□ -0.28
TPM1-215ENST00000558868 FAM86C2PA6NEL3 165 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms