RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 MCATQ8IVS2 390 aaKnown RBP11.35□□□□□ -0.59
RAB5C-204ENST00000547517 MCOLN3Q8TDD5 553 aa11.35□□□□□ -0.59
RAB5C-204ENST00000547517 FBF1Q8TES7 1133 aa11.35□□□□□ -0.59
RAB5C-204ENST00000547517 ALKBH8Q96BT7 664 aaKnown RBP11.35□□□□□ -0.59
RAB5C-204ENST00000547517 MED8Q96G25 268 aa11.35□□□□□ -0.59
RAB5C-204ENST00000547517 LRFN5Q96NI6 719 aa11.35□□□□□ -0.59
RAB5C-204ENST00000547517 CPNE1Q99829 537 aa11.35□□□□□ -0.59
RAB5C-204ENST00000547517 SELENOSQ9BQE4 189 aa11.35□□□□□ -0.59
RAB5C-204ENST00000547517 DPH7Q9BTV6 452 aa11.35□□□□□ -0.59
RAB5C-204ENST00000547517 NDC1Q9BTX1 674 aa11.35□□□□□ -0.59
RAB5C-204ENST00000547517 ACTL8Q9H568 366 aa11.35□□□□□ -0.59
RAB5C-204ENST00000547517 CAB39LQ9H9S4 337 aa11.35□□□□□ -0.59
RAB5C-204ENST00000547517 PARVBQ9HBI1 364 aa11.35□□□□□ -0.59
RAB5C-204ENST00000547517 LRRC4CQ9HCJ2 640 aa11.35□□□□□ -0.59
RAB5C-204ENST00000547517 CCDC177Q9NQR7 707 aaPredicted RBP11.35□□□□□ -0.59
RAB5C-204ENST00000547517 DHCR7Q9UBM7 475 aaKnown RBP11.35□□□□□ -0.59
RAB5C-204ENST00000547517 MTRF1LQ9UGC7 380 aaKnown RBP11.35□□□□□ -0.59
RAB5C-204ENST00000547517 DMGDHQ9UI17 866 aaKnown RBP11.35□□□□□ -0.59
RAB5C-204ENST00000547517 KCND3Q9UK17 655 aa11.35□□□□□ -0.59
RAB5C-204ENST00000547517 SRPK3Q9UPE1 567 aa11.35□□□□□ -0.59
RAB5C-204ENST00000547517 AP1M2Q9Y6Q5 423 aa11.35□□□□□ -0.59
RAB5C-204ENST00000547517 ATMQ13315 3056 aa11.34□□□□□ -0.59
RAB5C-204ENST00000547517 A0A0J9YVX5 310 aa11.34□□□□□ -0.59
RAB5C-204ENST00000547517 OR2A25A4D2G3 310 aa11.34□□□□□ -0.59
RAB5C-204ENST00000547517 NPEPPSL1A6NEC2 478 aa11.34□□□□□ -0.59
RAB5C-204ENST00000547517 EIF4E1BA6NMX2 242 aaKnown RBP11.34□□□□□ -0.59
RAB5C-204ENST00000547517 TARM1B6A8C7 271 aa11.34□□□□□ -0.59
RAB5C-204ENST00000547517 SLC16A5O15375 505 aa11.34□□□□□ -0.59
RAB5C-204ENST00000547517 C1QAP02745 245 aa11.34□□□□□ -0.59
RAB5C-204ENST00000547517 ITGB2P05107 769 aa11.34□□□□□ -0.59
RAB5C-204ENST00000547517 HBQ1P09105 142 aa11.34□□□□□ -0.59
RAB5C-204ENST00000547517 HIST1H2AGP0C0S8 130 aaPredicted RBP11.34□□□□□ -0.59
RAB5C-204ENST00000547517 HIST1H2ADP20671 130 aa11.34□□□□□ -0.59
RAB5C-204ENST00000547517 VSX2P58304 361 aaPredicted RBP11.34□□□□□ -0.59
RAB5C-204ENST00000547517 RPS15P62841 145 aaKnown RBP11.34□□□□□ -0.59
RAB5C-204ENST00000547517 MC1RQ01726 317 aa11.34□□□□□ -0.59
RAB5C-204ENST00000547517 ERV3-1Q14264 604 aa11.34□□□□□ -0.59
RAB5C-204ENST00000547517 TBR1Q16650 682 aa11.34□□□□□ -0.59
RAB5C-204ENST00000547517 KBTBD12Q3ZCT8 623 aa11.34□□□□□ -0.59
RAB5C-204ENST00000547517 PRAMEF13Q5VWM6 474 aa11.34□□□□□ -0.59
RAB5C-204ENST00000547517 ZNF517Q6ZMY9 492 aaPredicted RBP11.34□□□□□ -0.59
RAB5C-204ENST00000547517 RNF44Q7L0R7 432 aa11.34□□□□□ -0.59
RAB5C-204ENST00000547517 ADCK2Q7Z695 626 aa11.34□□□□□ -0.59
RAB5C-204ENST00000547517 CEP97Q8IW35 865 aa11.34□□□□□ -0.59
RAB5C-204ENST00000547517 LRRC56Q8IYG6 542 aaPredicted RBP11.34□□□□□ -0.59
RAB5C-204ENST00000547517 PPM1NQ8N819 430 aa11.34□□□□□ -0.59
RAB5C-204ENST00000547517 CEP112Q8N8E3 955 aa11.34□□□□□ -0.59
RAB5C-204ENST00000547517 ENDOVQ8N8Q3 282 aaKnown RBP11.34□□□□□ -0.59
RAB5C-204ENST00000547517 IFT81Q8WYA0 676 aa11.34□□□□□ -0.59
RAB5C-204ENST00000547517 SLC39A7Q92504 469 aa11.34□□□□□ -0.59
RAB5C-204ENST00000547517 ZUFSPQ96AP4 578 aa11.34□□□□□ -0.59
RAB5C-204ENST00000547517 HIST1H2AHQ96KK5 128 aa11.34□□□□□ -0.59
RAB5C-204ENST00000547517 CCDC138Q96M89 665 aa11.34□□□□□ -0.59
RAB5C-204ENST00000547517 RBBP8Q99708 897 aa11.34□□□□□ -0.59
RAB5C-204ENST00000547517 HIST1H2AJQ99878 128 aa11.34□□□□□ -0.59
RAB5C-204ENST00000547517 ARHGAP9Q9BRR9 750 aa11.34□□□□□ -0.59
RAB5C-204ENST00000547517 MCMBPQ9BTE3 642 aa11.34□□□□□ -0.59
RAB5C-204ENST00000547517 H2AFJQ9BTM1 129 aa11.34□□□□□ -0.59
RAB5C-204ENST00000547517 GPAMQ9HCL2 828 aa11.34□□□□□ -0.59
RAB5C-204ENST00000547517 STARD5Q9NSY2 213 aa11.34□□□□□ -0.59
RAB5C-204ENST00000547517 TXLNGQ9NUQ3 528 aa11.34□□□□□ -0.59
RAB5C-204ENST00000547517 ARL15Q9NXU5 204 aa11.34□□□□□ -0.59
RAB5C-204ENST00000547517 IKZF3Q9UKT9 509 aa11.34□□□□□ -0.59
RAB5C-204ENST00000547517 PCDHGA6Q9Y5G7 932 aa11.34□□□□□ -0.59
RAB5C-204ENST00000547517 KLK4Q9Y5K2 254 aa11.34□□□□□ -0.59
RAB5C-204ENST00000547517 IGSF10Q6WRI0 2623 aa11.34□□□□□ -0.59
RAB5C-204ENST00000547517 IGKV1-8A0A0C4DH67 115 aa11.33□□□□□ -0.6
RAB5C-204ENST00000547517 CDC14CA4D256 554 aa11.33□□□□□ -0.6
RAB5C-204ENST00000547517 C9J4A7 227 aa11.33□□□□□ -0.6
RAB5C-204ENST00000547517 PHGDHO43175 533 aaKnown RBP11.33□□□□□ -0.6
RAB5C-204ENST00000547517 CREG1O75629 220 aa11.33□□□□□ -0.6
RAB5C-204ENST00000547517 FAM155BO75949 473 aa11.33□□□□□ -0.6
RAB5C-204ENST00000547517 GUCA1CO95843 209 aa11.33□□□□□ -0.6
RAB5C-204ENST00000547517 PRB1P04280 392 aa11.33□□□□□ -0.6
RAB5C-204ENST00000547517 EIF2S1P05198 315 aaKnown RBP11.33□□□□□ -0.6
RAB5C-204ENST00000547517 FAM87AP0C7U9 286 aa11.33□□□□□ -0.6
RAB5C-204ENST00000547517 AGXTP21549 392 aa11.33□□□□□ -0.6
RAB5C-204ENST00000547517 PTPN4P29074 926 aa11.33□□□□□ -0.6
RAB5C-204ENST00000547517 NFKB2Q00653 900 aa11.33□□□□□ -0.6
RAB5C-204ENST00000547517 POU4F1Q01851 419 aa11.33□□□□□ -0.6
RAB5C-204ENST00000547517 PRDX1Q06830 199 aaKnown RBP11.33□□□□□ -0.6
RAB5C-204ENST00000547517 ILF2Q12905 390 aaKnown RBP11.33□□□□□ -0.6
RAB5C-204ENST00000547517 LY6DQ14210 128 aa11.33□□□□□ -0.6
RAB5C-204ENST00000547517 USP10Q14694 798 aaKnown RBP11.33□□□□□ -0.6
RAB5C-204ENST00000547517 SLC9A5Q14940 896 aa11.33□□□□□ -0.6
RAB5C-204ENST00000547517 SLMAPQ14BN4 828 aa11.33□□□□□ -0.6
RAB5C-204ENST00000547517 NCF4Q15080 339 aa11.33□□□□□ -0.6
RAB5C-204ENST00000547517 LINC00303Q3SY05 128 aa11.33□□□□□ -0.6
RAB5C-204ENST00000547517 UBAP2Q5T6F2 1119 aaKnown RBP11.33□□□□□ -0.6
RAB5C-204ENST00000547517 FAM69BQ5VUD6 431 aa11.33□□□□□ -0.6
RAB5C-204ENST00000547517 ZNF385CQ66K41 422 aaPredicted RBP11.33□□□□□ -0.6
RAB5C-204ENST00000547517 FRMPD2BQ6IN97 320 aa11.33□□□□□ -0.6
RAB5C-204ENST00000547517 RHBDD2Q6NTF9 364 aa11.33□□□□□ -0.6
RAB5C-204ENST00000547517 BORAQ6PGQ7 559 aa11.33□□□□□ -0.6
RAB5C-204ENST00000547517 AGTRAPQ6RW13 159 aa11.33□□□□□ -0.6
RAB5C-204ENST00000547517 NKAPQ8N5F7 415 aaKnown RBP11.33□□□□□ -0.6
RAB5C-204ENST00000547517 TTC29Q8NA56 475 aaPredicted RBP11.33□□□□□ -0.6
RAB5C-204ENST00000547517 PROKR1Q8TCW9 393 aa11.33□□□□□ -0.6
RAB5C-204ENST00000547517 TSPAN17Q96FV3 270 aa11.33□□□□□ -0.6
RAB5C-204ENST00000547517 CATSPER2Q96P56 530 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms