RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 NXNL1Q96CM4 212 aa17.49■□□□□ 0.39
VEGFA-222ENST00000520948 PPM1MQ96MI6 270 aa17.49■□□□□ 0.39
VEGFA-222ENST00000520948 GPR78Q96P69 363 aa17.49■□□□□ 0.39
VEGFA-222ENST00000520948 ZNF768Q9H5H4 540 aaKnown RBP17.49■□□□□ 0.39
VEGFA-222ENST00000520948 C1GALT1Q9NS00 363 aa17.49■□□□□ 0.39
VEGFA-222ENST00000520948 STOX2Q9P2F5 926 aaPredicted RBP17.49■□□□□ 0.39
VEGFA-222ENST00000520948 TLK1Q9UKI8 766 aa17.49■□□□□ 0.39
VEGFA-222ENST00000520948 OARD1Q9Y530 152 aa17.49■□□□□ 0.39
VEGFA-222ENST00000520948 PCM1Q15154 2024 aa17.48■□□□□ 0.39
VEGFA-222ENST00000520948 BSNQ9UPA5 3926 aa17.48■□□□□ 0.39
VEGFA-222ENST00000520948 IQANK1A0A1B0GTG1 560 aa17.48■□□□□ 0.39
VEGFA-222ENST00000520948 CCDC151A5D8V7 595 aa17.48■□□□□ 0.39
VEGFA-222ENST00000520948 A8MU76 341 aa17.48■□□□□ 0.39
VEGFA-222ENST00000520948 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.48■□□□□ 0.39
VEGFA-222ENST00000520948 SUV39H1O43463 412 aa17.48■□□□□ 0.39
VEGFA-222ENST00000520948 KLHL2O95198 593 aa17.48■□□□□ 0.39
VEGFA-222ENST00000520948 UGT2B7P16662 529 aa17.48■□□□□ 0.39
VEGFA-222ENST00000520948 SLC5A12Q1EHB4 618 aa17.48■□□□□ 0.39
VEGFA-222ENST00000520948 SNAP47Q5SQN1 464 aa17.48■□□□□ 0.39
VEGFA-222ENST00000520948 CACHD1Q5VU97 1274 aa17.48■□□□□ 0.39
VEGFA-222ENST00000520948 SPESP1Q6UW49 350 aa17.48■□□□□ 0.39
VEGFA-222ENST00000520948 ADAMTSL2Q86TH1 951 aa17.48■□□□□ 0.39
VEGFA-222ENST00000520948 TBC1D1Q86TI0 1168 aaPredicted RBP17.48■□□□□ 0.39
VEGFA-222ENST00000520948 IQCKQ8N0W5 287 aa17.48■□□□□ 0.39
VEGFA-222ENST00000520948 CYP4X1Q8N118 509 aa17.48■□□□□ 0.39
VEGFA-222ENST00000520948 PLD6Q8N2A8 252 aaKnown RBP17.48■□□□□ 0.39
VEGFA-222ENST00000520948 RAB42Q8N4Z0 105 aa17.48■□□□□ 0.39
VEGFA-222ENST00000520948 C2orf73Q8N5S3 287 aaPredicted RBP17.48■□□□□ 0.39
VEGFA-222ENST00000520948 OR2A1Q8NGT9 310 aa17.48■□□□□ 0.39
VEGFA-222ENST00000520948 KCTD4Q8WVF5 259 aa17.48■□□□□ 0.39
VEGFA-222ENST00000520948 NKD1Q969G9 470 aa17.48■□□□□ 0.39
VEGFA-222ENST00000520948 SLC22A18Q96BI1 424 aa17.48■□□□□ 0.39
VEGFA-222ENST00000520948 SLC41A2Q96JW4 573 aa17.48■□□□□ 0.39
VEGFA-222ENST00000520948 TMEM109Q9BVC6 243 aa17.48■□□□□ 0.39
VEGFA-222ENST00000520948 TRIM54Q9BYV2 358 aa17.48■□□□□ 0.39
VEGFA-222ENST00000520948 ROPN1BQ9BZX4 212 aaPredicted RBP17.48■□□□□ 0.39
VEGFA-222ENST00000520948 UNKQ9C0B0 810 aaKnown RBP17.48■□□□□ 0.39
VEGFA-222ENST00000520948 ZMYND15Q9H091 742 aa17.48■□□□□ 0.39
VEGFA-222ENST00000520948 ROPN1Q9HAT0 212 aaPredicted RBP17.48■□□□□ 0.39
VEGFA-222ENST00000520948 NMRAL1Q9HBL8 299 aa17.48■□□□□ 0.39
VEGFA-222ENST00000520948 KLHL3Q9UH77 587 aa17.48■□□□□ 0.39
VEGFA-222ENST00000520948 CCDC189A1A4V9 331 aa17.47■□□□□ 0.39
VEGFA-222ENST00000520948 GSAPA4D1B5 854 aa17.47■□□□□ 0.39
VEGFA-222ENST00000520948 ISM1B1AKI9 464 aa17.47■□□□□ 0.39
VEGFA-222ENST00000520948 SYF2O95926 243 aaKnown RBP17.47■□□□□ 0.39
VEGFA-222ENST00000520948 HIST1H2AGP0C0S8 130 aaPredicted RBP17.47■□□□□ 0.39
VEGFA-222ENST00000520948 SFTPCP11686 197 aa17.47■□□□□ 0.39
VEGFA-222ENST00000520948 COL6A2P12110 1019 aa17.47■□□□□ 0.39
VEGFA-222ENST00000520948 HIST1H2ADP20671 130 aa17.47■□□□□ 0.39
VEGFA-222ENST00000520948 OAS2P29728 719 aaKnown RBP17.47■□□□□ 0.39
VEGFA-222ENST00000520948 ATP1A2P50993 1020 aa17.47■□□□□ 0.39
VEGFA-222ENST00000520948 OR4D1Q15615 310 aa17.47■□□□□ 0.39
VEGFA-222ENST00000520948 BEND6Q5SZJ8 279 aaPredicted RBP17.47■□□□□ 0.39
VEGFA-222ENST00000520948 FBXO38Q6PIJ6 1188 aa17.47■□□□□ 0.39
VEGFA-222ENST00000520948 MBOAT1Q6ZNC8 495 aa17.47■□□□□ 0.39
VEGFA-222ENST00000520948 SH2D5Q6ZV89 423 aa17.47■□□□□ 0.39
VEGFA-222ENST00000520948 KMT5CQ86Y97 462 aa17.47■□□□□ 0.39
VEGFA-222ENST00000520948 IL22RA1Q8N6P7 574 aa17.47■□□□□ 0.39
VEGFA-222ENST00000520948 EPS8L3Q8TE67 593 aaKnown RBP17.47■□□□□ 0.39
VEGFA-222ENST00000520948 SMPDL3AQ92484 453 aa17.47■□□□□ 0.39
VEGFA-222ENST00000520948 FBXL8Q96CD0 374 aa17.47■□□□□ 0.39
VEGFA-222ENST00000520948 HIST1H2AHQ96KK5 128 aa17.47■□□□□ 0.39
VEGFA-222ENST00000520948 TRAPPC9Q96Q05 1148 aa17.47■□□□□ 0.39
VEGFA-222ENST00000520948 TAAR9Q96RI9 348 aa17.47■□□□□ 0.39
VEGFA-222ENST00000520948 HIST1H2AJQ99878 128 aa17.47■□□□□ 0.39
VEGFA-222ENST00000520948 H2AFJQ9BTM1 129 aa17.47■□□□□ 0.39
VEGFA-222ENST00000520948 TBK1Q9UHD2 729 aa17.47■□□□□ 0.39
VEGFA-222ENST00000520948 B3GALT1Q9Y5Z6 326 aa17.47■□□□□ 0.39
VEGFA-222ENST00000520948 ANKRD12Q6UB98 2062 aa17.47■□□□□ 0.39
VEGFA-222ENST00000520948 HECTD1Q9ULT8 2610 aa17.47■□□□□ 0.39
VEGFA-222ENST00000520948 ZNF839A8K0R7 811 aa17.46■□□□□ 0.39
VEGFA-222ENST00000520948 CDH16O75309 829 aa17.46■□□□□ 0.39
VEGFA-222ENST00000520948 FKBP9O95302 570 aa17.46■□□□□ 0.39
VEGFA-222ENST00000520948 LIFP15018 202 aa17.46■□□□□ 0.39
VEGFA-222ENST00000520948 NELFEP18615 380 aaKnown RBP17.46■□□□□ 0.39
VEGFA-222ENST00000520948 TFEBP19484 476 aa17.46■□□□□ 0.39
VEGFA-222ENST00000520948 SLCO1A2P46721 670 aa17.46■□□□□ 0.39
VEGFA-222ENST00000520948 ACAP2Q15057 778 aa17.46■□□□□ 0.39
VEGFA-222ENST00000520948 TGFBIQ15582 683 aa17.46■□□□□ 0.39
VEGFA-222ENST00000520948 FAM83EQ2M2I3 478 aa17.46■□□□□ 0.39
VEGFA-222ENST00000520948 CDKL4Q5MAI5 379 aa17.46■□□□□ 0.39
VEGFA-222ENST00000520948 AGTRAPQ6RW13 159 aa17.46■□□□□ 0.39
VEGFA-222ENST00000520948 SUSD1Q6UWL2 747 aa17.46■□□□□ 0.39
VEGFA-222ENST00000520948 FAM129CQ86XR2 697 aa17.46■□□□□ 0.39
VEGFA-222ENST00000520948 BMPERQ8N8U9 685 aa17.46■□□□□ 0.39
VEGFA-222ENST00000520948 PPFIBP2Q8ND30 876 aa17.46■□□□□ 0.39
VEGFA-222ENST00000520948 AGBL5Q8NDL9 886 aa17.46■□□□□ 0.39
VEGFA-222ENST00000520948 MYRIPQ8NFW9 859 aa17.46■□□□□ 0.39
VEGFA-222ENST00000520948 RHEBL1Q8TAI7 183 aa17.46■□□□□ 0.39
VEGFA-222ENST00000520948 ATOH8Q96SQ7 321 aa17.46■□□□□ 0.39
VEGFA-222ENST00000520948 B3GNT4Q9C0J1 378 aa17.46■□□□□ 0.39
VEGFA-222ENST00000520948 VPS11Q9H270 941 aa17.46■□□□□ 0.39
VEGFA-222ENST00000520948 OCIAD1Q9NX40 245 aa17.46■□□□□ 0.39
VEGFA-222ENST00000520948 SIDT1Q9NXL6 827 aaKnown RBP17.46■□□□□ 0.39
VEGFA-222ENST00000520948 ARL15Q9NXU5 204 aa17.46■□□□□ 0.39
VEGFA-222ENST00000520948 PLAAQ9Y263 795 aa17.46■□□□□ 0.39
VEGFA-222ENST00000520948 BTRCQ9Y297 605 aa17.46■□□□□ 0.39
VEGFA-222ENST00000520948 KLK4Q9Y5K2 254 aa17.46■□□□□ 0.39
VEGFA-222ENST00000520948 A0A0J9YY10 115 aa17.45■□□□□ 0.38
VEGFA-222ENST00000520948 A0A1W2PPM1 405 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms