RNA–Protein interactions for RNA: ENST00000514313.1

NUP54-215, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-215ENST00000514313 PSMA8Q8TAA3 256 aa6.82□□□□□ -1.32
NUP54-215ENST00000514313 UBLCP1Q8WVY7 318 aaPredicted RBP6.82□□□□□ -1.32
NUP54-215ENST00000514313 AP2M1Q96CW1 435 aa6.82□□□□□ -1.32
NUP54-215ENST00000514313 PANX3Q96QZ0 392 aa6.82□□□□□ -1.32
NUP54-215ENST00000514313 PKP4Q99569 1192 aa6.82□□□□□ -1.32
NUP54-215ENST00000514313 ATG101Q9BSB4 218 aa6.82□□□□□ -1.32
NUP54-215ENST00000514313 TRIM7Q9C029 511 aa6.82□□□□□ -1.32
NUP54-215ENST00000514313 MIS12Q9H081 205 aa6.82□□□□□ -1.32
NUP54-215ENST00000514313 PNPLA3Q9NST1 481 aa6.82□□□□□ -1.32
NUP54-215ENST00000514313 ZDHHC2Q9UIJ5 367 aa6.82□□□□□ -1.32
NUP54-215ENST00000514313 PA2G4Q9UQ80 394 aaKnown RBP6.82□□□□□ -1.32
NUP54-215ENST00000514313 CRCPO75575 148 aa6.81□□□□□ -1.32
NUP54-215ENST00000514313 NGFRP08138 427 aa6.81□□□□□ -1.32
NUP54-215ENST00000514313 PIK3R1P27986 724 aa6.81□□□□□ -1.32
NUP54-215ENST00000514313 OR3A1P47881 315 aa6.81□□□□□ -1.32
NUP54-215ENST00000514313 CLK1P49759 484 aaKnown RBP6.81□□□□□ -1.32
NUP54-215ENST00000514313 HTR6P50406 440 aa6.81□□□□□ -1.32
NUP54-215ENST00000514313 CDH11P55287 796 aa6.81□□□□□ -1.32
NUP54-215ENST00000514313 DSCR9P59020 149 aa6.81□□□□□ -1.32
NUP54-215ENST00000514313 TAF10Q12962 218 aa6.81□□□□□ -1.32
NUP54-215ENST00000514313 PHKG1Q16816 387 aa6.81□□□□□ -1.32
NUP54-215ENST00000514313 LYSMD4Q5XG99 296 aa6.81□□□□□ -1.32
NUP54-215ENST00000514313 AWAT2Q6E213 333 aa6.81□□□□□ -1.32
NUP54-215ENST00000514313 TUBA1AQ71U36 451 aa6.81□□□□□ -1.32
NUP54-215ENST00000514313 MEX3DQ86XN8 651 aaKnown RBP6.81□□□□□ -1.32
NUP54-215ENST00000514313 PLD3Q8IV08 490 aa6.81□□□□□ -1.32
NUP54-215ENST00000514313 SECTM1Q8WVN6 248 aa6.81□□□□□ -1.32
NUP54-215ENST00000514313 SORCS1Q8WY21 1168 aa6.81□□□□□ -1.32
NUP54-215ENST00000514313 SLC47A1Q96FL8 570 aa6.81□□□□□ -1.32
NUP54-215ENST00000514313 TMEM237Q96Q45 408 aa6.81□□□□□ -1.32
NUP54-215ENST00000514313 TUBA1CQ9BQE3 449 aa6.81□□□□□ -1.32
NUP54-215ENST00000514313 CCDC3Q9BQI4 270 aa6.81□□□□□ -1.32
NUP54-215ENST00000514313 CDK19Q9BWU1 502 aa6.81□□□□□ -1.32
NUP54-215ENST00000514313 TLE6Q9H808 572 aa6.81□□□□□ -1.32
NUP54-215ENST00000514313 DNAJC11Q9NVH1 559 aa6.81□□□□□ -1.32
NUP54-215ENST00000514313 SPG21Q9NZD8 308 aa6.81□□□□□ -1.32
NUP54-215ENST00000514313 GMEB2Q9UKD1 530 aa6.81□□□□□ -1.32
NUP54-215ENST00000514313 APPL1Q9UKG1 709 aa6.81□□□□□ -1.32
NUP54-215ENST00000514313 ODF2LQ9ULJ1 636 aa6.81□□□□□ -1.32
NUP54-215ENST00000514313 ILVBLA1L0T0 632 aa6.8□□□□□ -1.32
NUP54-215ENST00000514313 C5orf51A6NDU8 294 aa6.8□□□□□ -1.32
NUP54-215ENST00000514313 H0YIG0 161 aa6.8□□□□□ -1.32
NUP54-215ENST00000514313 CCL24O00175 119 aa6.8□□□□□ -1.32
NUP54-215ENST00000514313 PPP1R3DO95685 299 aa6.8□□□□□ -1.32
NUP54-215ENST00000514313 SBK2P0C263 348 aa6.8□□□□□ -1.32
NUP54-215ENST00000514313 MAGEB1P43366 347 aa6.8□□□□□ -1.32
NUP54-215ENST00000514313 IER3P46695 156 aa6.8□□□□□ -1.32
NUP54-215ENST00000514313 PITX1P78337 314 aaPredicted RBP6.8□□□□□ -1.32
NUP54-215ENST00000514313 KLC1Q07866 573 aa6.8□□□□□ -1.32
NUP54-215ENST00000514313 PPA1Q15181 289 aa6.8□□□□□ -1.32
NUP54-215ENST00000514313 PARP10Q53GL7 1025 aa6.8□□□□□ -1.32
NUP54-215ENST00000514313 DCAF10Q5QP82 559 aa6.8□□□□□ -1.32
NUP54-215ENST00000514313 OR4A47Q6IF82 309 aa6.8□□□□□ -1.32
NUP54-215ENST00000514313 ZNF852Q6ZMS4 543 aa6.8□□□□□ -1.32
NUP54-215ENST00000514313 ANO5Q75V66 913 aa6.8□□□□□ -1.32
NUP54-215ENST00000514313 SPATA2LQ8IUW3 424 aaPredicted RBP6.8□□□□□ -1.32
NUP54-215ENST00000514313 LMNTD1Q8N9Z9 388 aa6.8□□□□□ -1.32
NUP54-215ENST00000514313 HSD17B8Q92506 261 aa6.8□□□□□ -1.32
NUP54-215ENST00000514313 GDAP1L1Q96MZ0 367 aa6.8□□□□□ -1.32
NUP54-215ENST00000514313 IL17FQ96PD4 163 aa6.8□□□□□ -1.32
NUP54-215ENST00000514313 PRAM1Q96QH2 718 aa6.8□□□□□ -1.32
NUP54-215ENST00000514313 TMEM204Q9BSN7 226 aa6.8□□□□□ -1.32
NUP54-215ENST00000514313 URM1Q9BTM9 101 aaKnown RBP6.8□□□□□ -1.32
NUP54-215ENST00000514313 LRRC1Q9BTT6 524 aa6.8□□□□□ -1.32
NUP54-215ENST00000514313 LAT2Q9GZY6 243 aa6.8□□□□□ -1.32
NUP54-215ENST00000514313 ZMYND12Q9H0C1 365 aa6.8□□□□□ -1.32
NUP54-215ENST00000514313 P2RY12Q9H244 342 aa6.8□□□□□ -1.32
NUP54-215ENST00000514313 CYP39A1Q9NYL5 469 aa6.8□□□□□ -1.32
NUP54-215ENST00000514313 STUB1Q9UNE7 303 aa6.8□□□□□ -1.32
NUP54-215ENST00000514313 KLK4Q9Y5K2 254 aa6.8□□□□□ -1.32
NUP54-215ENST00000514313 IGLV5-45A0A087WSX0 123 aa6.79□□□□□ -1.32
NUP54-215ENST00000514313 TULP2O00295 520 aa6.79□□□□□ -1.32
NUP54-215ENST00000514313 XPNPEP2O43895 674 aa6.79□□□□□ -1.32
NUP54-215ENST00000514313 MOCS2O96007 188 aaPredicted RBP6.79□□□□□ -1.32
NUP54-215ENST00000514313 MSH3P20585 1137 aa6.79□□□□□ -1.32
NUP54-215ENST00000514313 CDH3P22223 829 aa6.79□□□□□ -1.32
NUP54-215ENST00000514313 CA4P22748 312 aa6.79□□□□□ -1.32
NUP54-215ENST00000514313 DGKAP23743 735 aa6.79□□□□□ -1.32
NUP54-215ENST00000514313 CDKN2AP42771 156 aaKnown RBP6.79□□□□□ -1.32
NUP54-215ENST00000514313 LGALS3BPQ08380 585 aa6.79□□□□□ -1.32
NUP54-215ENST00000514313 RBBP7Q16576 425 aa6.79□□□□□ -1.32
NUP54-215ENST00000514313 KIF19Q2TAC6 998 aa6.79□□□□□ -1.32
NUP54-215ENST00000514313 IFI44LQ53G44 452 aa6.79□□□□□ -1.32
NUP54-215ENST00000514313 C9orf57Q5W0N0 161 aa6.79□□□□□ -1.32
NUP54-215ENST00000514313 C16orf82Q7Z2V1 217 aa6.79□□□□□ -1.32
NUP54-215ENST00000514313 ARMC9Q7Z3E5 817 aa6.79□□□□□ -1.32
NUP54-215ENST00000514313 DNAJC22Q8N4W6 341 aa6.79□□□□□ -1.32
NUP54-215ENST00000514313 RTL3Q8N8U3 475 aaKnown RBP6.79□□□□□ -1.32
NUP54-215ENST00000514313 NOA1Q8NC60 698 aaKnown RBP6.79□□□□□ -1.32
NUP54-215ENST00000514313 RNASE8Q8TDE3 154 aaKnown RBP6.79□□□□□ -1.32
NUP54-215ENST00000514313 PGM2Q96G03 612 aa6.79□□□□□ -1.32
NUP54-215ENST00000514313 C5orf30Q96GV9 206 aa6.79□□□□□ -1.32
NUP54-215ENST00000514313 ZNF559Q9BR84 538 aa6.79□□□□□ -1.32
NUP54-215ENST00000514313 ACTL8Q9H568 366 aa6.79□□□□□ -1.32
NUP54-215ENST00000514313 AKIRIN1Q9H9L7 192 aaPredicted RBP6.79□□□□□ -1.32
NUP54-215ENST00000514313 PKD2L2Q9NZM6 624 aa6.79□□□□□ -1.32
NUP54-215ENST00000514313 FETUBQ9UGM5 382 aa6.79□□□□□ -1.32
NUP54-215ENST00000514313 NOCTQ9UK39 431 aaKnown RBP6.79□□□□□ -1.32
NUP54-215ENST00000514313 RUVBL2Q9Y230 463 aaKnown RBP6.79□□□□□ -1.32
NUP54-215ENST00000514313 ITM2BQ9Y287 266 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms