RNA–Protein interactions for RNA: ENST00000511467.1

PTPN13-209, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 2 BASIC

Gene PTPN13, Length 8,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-209ENST00000511467 TRBC1P01850 177 aa4.83□□□□□ -1.64
PTPN13-209ENST00000511467 MTHFD1P11586 935 aaKnown RBP4.83□□□□□ -1.64
PTPN13-209ENST00000511467 CSF2RAP15509 400 aa4.83□□□□□ -1.64
PTPN13-209ENST00000511467 IL1RNP18510 177 aa4.83□□□□□ -1.64
PTPN13-209ENST00000511467 PVALBP20472 110 aaPredicted RBP4.83□□□□□ -1.64
PTPN13-209ENST00000511467 FSHRP23945 695 aa4.83□□□□□ -1.64
PTPN13-209ENST00000511467 SSR2P43308 183 aa4.83□□□□□ -1.64
PTPN13-209ENST00000511467 ROR2Q01974 943 aaKnown RBP4.83□□□□□ -1.64
PTPN13-209ENST00000511467 DLG2Q15700 870 aa4.83□□□□□ -1.64
PTPN13-209ENST00000511467 MAPK14Q16539 360 aa4.83□□□□□ -1.64
PTPN13-209ENST00000511467 PLEKHG7Q6ZR37 379 aa4.83□□□□□ -1.64
PTPN13-209ENST00000511467 PQLC1Q8N2U9 271 aa4.83□□□□□ -1.64
PTPN13-209ENST00000511467 C10orf53Q8N6V4 93 aa4.83□□□□□ -1.64
PTPN13-209ENST00000511467 LRRC57Q8N9N7 239 aa4.83□□□□□ -1.64
PTPN13-209ENST00000511467 RBM15BQ8NDT2 890 aaKnown RBP4.83□□□□□ -1.64
PTPN13-209ENST00000511467 SFXN5Q8TD22 340 aa4.83□□□□□ -1.64
PTPN13-209ENST00000511467 SLC45A3Q96JT2 553 aa4.83□□□□□ -1.64
PTPN13-209ENST00000511467 NPAS2Q99743 824 aa4.83□□□□□ -1.64
PTPN13-209ENST00000511467 TAPBPLQ9BX59 468 aa4.83□□□□□ -1.64
PTPN13-209ENST00000511467 BHLHE41Q9C0J9 482 aaPredicted RBP4.83□□□□□ -1.64
PTPN13-209ENST00000511467 SPRTNQ9H040 489 aaPredicted RBP4.83□□□□□ -1.64
PTPN13-209ENST00000511467 QRSL1Q9H0R6 528 aaKnown RBP4.83□□□□□ -1.64
PTPN13-209ENST00000511467 PDE7BQ9NP56 450 aa4.83□□□□□ -1.64
PTPN13-209ENST00000511467 ABCB9Q9NP78 766 aa4.83□□□□□ -1.64
PTPN13-209ENST00000511467 SACM1LQ9NTJ5 587 aa4.83□□□□□ -1.64
PTPN13-209ENST00000511467 PAQR5Q9NXK6 330 aaPredicted RBP4.83□□□□□ -1.64
PTPN13-209ENST00000511467 TAS2R9Q9NYW1 312 aa4.83□□□□□ -1.64
PTPN13-209ENST00000511467 C15orf41Q9Y2V0 281 aa4.83□□□□□ -1.64
PTPN13-209ENST00000511467 H7C1Q1 480 aa4.82□□□□□ -1.64
PTPN13-209ENST00000511467 MMP20O60882 483 aa4.82□□□□□ -1.64
PTPN13-209ENST00000511467 TFEBP19484 476 aa4.82□□□□□ -1.64
PTPN13-209ENST00000511467 MGAT1P26572 445 aa4.82□□□□□ -1.64
PTPN13-209ENST00000511467 EIF2S3P41091 472 aaKnown RBP4.82□□□□□ -1.64
PTPN13-209ENST00000511467 CDH11P55287 796 aa4.82□□□□□ -1.64
PTPN13-209ENST00000511467 ACTBP60709 375 aa4.82□□□□□ -1.64
PTPN13-209ENST00000511467 ACTG1P63261 375 aa4.82□□□□□ -1.64
PTPN13-209ENST00000511467 DECR1Q16698 335 aa4.82□□□□□ -1.64
PTPN13-209ENST00000511467 LY6KQ17RY6 165 aa4.82□□□□□ -1.64
PTPN13-209ENST00000511467 CCDC103Q8IW40 242 aa4.82□□□□□ -1.64
PTPN13-209ENST00000511467 EID2Q8N6I1 236 aa4.82□□□□□ -1.64
PTPN13-209ENST00000511467 HIPK4Q8NE63 616 aa4.82□□□□□ -1.64
PTPN13-209ENST00000511467 UBA3Q8TBC4 463 aa4.82□□□□□ -1.64
PTPN13-209ENST00000511467 SLC7A13Q8TCU3 470 aa4.82□□□□□ -1.64
PTPN13-209ENST00000511467 STOX2Q9P2F5 926 aaPredicted RBP4.82□□□□□ -1.64
PTPN13-209ENST00000511467 KLHL21Q9UJP4 597 aa4.82□□□□□ -1.64
PTPN13-209ENST00000511467 ADAMTS5Q9UNA0 930 aa4.82□□□□□ -1.64
PTPN13-209ENST00000511467 SLC6A5Q9Y345 797 aa4.82□□□□□ -1.64
PTPN13-209ENST00000511467 CDH10Q9Y6N8 788 aa4.82□□□□□ -1.64
PTPN13-209ENST00000511467 FREM1Q5H8C1 2179 aa4.82□□□□□ -1.64
PTPN13-209ENST00000511467 NPIPA5A0A0B4J1W7 369 aa4.82□□□□□ -1.64
PTPN13-209ENST00000511467 PDPK1O15530 556 aa4.82□□□□□ -1.64
PTPN13-209ENST00000511467 HNRNPCP07910 306 aaKnown RBP eCLIP4.82□□□□□ -1.64
PTPN13-209ENST00000511467 CD247P20963 164 aa4.82□□□□□ -1.64
PTPN13-209ENST00000511467 LHCGRP22888 699 aa4.82□□□□□ -1.64
PTPN13-209ENST00000511467 SLC5A3P53794 718 aa4.82□□□□□ -1.64
PTPN13-209ENST00000511467 PPP2R2BQ00005 443 aa4.82□□□□□ -1.64
PTPN13-209ENST00000511467 GPR176Q14439 515 aa4.82□□□□□ -1.64
PTPN13-209ENST00000511467 KIR2DS3Q14952 304 aa4.82□□□□□ -1.64
PTPN13-209ENST00000511467 SSX1Q16384 188 aa4.82□□□□□ -1.64
PTPN13-209ENST00000511467 FAM20CQ8IXL6 584 aa4.82□□□□□ -1.64
PTPN13-209ENST00000511467 C1orf174Q8IYL3 243 aa4.82□□□□□ -1.64
PTPN13-209ENST00000511467 OR2AP1Q8NGE2 309 aa4.82□□□□□ -1.64
PTPN13-209ENST00000511467 HERVK_113Q902F9 699 aa4.82□□□□□ -1.64
PTPN13-209ENST00000511467 NUS1Q96E22 293 aa4.82□□□□□ -1.64
PTPN13-209ENST00000511467 P2RY11Q96G91 374 aa4.82□□□□□ -1.64
PTPN13-209ENST00000511467 BTBD1Q9H0C5 482 aa4.82□□□□□ -1.64
PTPN13-209ENST00000511467 OSGEPL1Q9H4B0 414 aa4.82□□□□□ -1.64
PTPN13-209ENST00000511467 RC3H2Q9HBD1 1191 aaKnown RBP4.82□□□□□ -1.64
PTPN13-209ENST00000511467 SNX15Q9NRS6 342 aa4.82□□□□□ -1.64
PTPN13-209ENST00000511467 OARD1Q9Y530 152 aa4.82□□□□□ -1.64
PTPN13-209ENST00000511467 A0A1W2PP18 115 aa4.82□□□□□ -1.64
PTPN13-209ENST00000511467 IGLON5A6NGN9 336 aa4.82□□□□□ -1.64
PTPN13-209ENST00000511467 CASTOR2A6NHX0 329 aa4.82□□□□□ -1.64
PTPN13-209ENST00000511467 PP2D1A8MPX8 630 aa4.82□□□□□ -1.64
PTPN13-209ENST00000511467 M0R129 80 aa4.82□□□□□ -1.64
PTPN13-209ENST00000511467 RGS10O43665 173 aa4.82□□□□□ -1.64
PTPN13-209ENST00000511467 LRCH4O75427 683 aa4.82□□□□□ -1.64
PTPN13-209ENST00000511467 OR6B1O95007 311 aa4.82□□□□□ -1.64
PTPN13-209ENST00000511467 HRGP04196 525 aa4.82□□□□□ -1.64
PTPN13-209ENST00000511467 SERPIND1P05546 499 aa4.82□□□□□ -1.64
PTPN13-209ENST00000511467 PNMTP11086 282 aa4.82□□□□□ -1.64
PTPN13-209ENST00000511467 HIST1H1TP22492 207 aaPredicted RBP4.82□□□□□ -1.64
PTPN13-209ENST00000511467 ARHGAP1Q07960 439 aa4.82□□□□□ -1.64
PTPN13-209ENST00000511467 SCGB2A2Q13296 93 aa4.82□□□□□ -1.64
PTPN13-209ENST00000511467 ITPRIPL2Q3MIP1 535 aa4.82□□□□□ -1.64
PTPN13-209ENST00000511467 CCNYL2Q5T2Q4 361 aa4.82□□□□□ -1.64
PTPN13-209ENST00000511467 ZNF621Q6ZSS3 439 aa4.82□□□□□ -1.64
PTPN13-209ENST00000511467 USP43Q70EL4 1123 aa4.82□□□□□ -1.64
PTPN13-209ENST00000511467 ATCAYQ86WG3 371 aa4.82□□□□□ -1.64
PTPN13-209ENST00000511467 ZCCHC7Q8N3Z6 543 aaKnown RBP4.82□□□□□ -1.64
PTPN13-209ENST00000511467 LPCAT1Q8NF37 534 aa4.82□□□□□ -1.64
PTPN13-209ENST00000511467 CNDP2Q96KP4 475 aaKnown RBP4.82□□□□□ -1.64
PTPN13-209ENST00000511467 KLHL5Q96PQ7 755 aa4.82□□□□□ -1.64
PTPN13-209ENST00000511467 PRDM12Q9H4Q4 367 aa4.82□□□□□ -1.64
PTPN13-209ENST00000511467 SUV39H2Q9H5I1 410 aa4.82□□□□□ -1.64
PTPN13-209ENST00000511467 IL23AQ9NPF7 189 aa4.82□□□□□ -1.64
PTPN13-209ENST00000511467 LIMD1Q9UGP4 676 aa4.82□□□□□ -1.64
PTPN13-209ENST00000511467 PPT2Q9UMR5 302 aa4.82□□□□□ -1.64
PTPN13-209ENST00000511467 NENFQ9UMX5 172 aa4.82□□□□□ -1.64
PTPN13-209ENST00000511467 MGAT4BQ9UQ53 548 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms