RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 MAGEE1Q9HCI5 957 aa11.02□□□□□ -0.65
SMPD4-218ENST00000482171 POLE4Q9NR33 117 aa11.02□□□□□ -0.65
SMPD4-218ENST00000482171 SOHLH2Q9NX45 425 aa11.02□□□□□ -0.65
SMPD4-218ENST00000482171 SLC27A6Q9Y2P4 619 aa11.02□□□□□ -0.65
SMPD4-218ENST00000482171 LRRC37AA6NMS7 1700 aa11.02□□□□□ -0.65
SMPD4-218ENST00000482171 ZNF831Q5JPB2 1677 aa11.02□□□□□ -0.65
SMPD4-218ENST00000482171 ELOVL7A1L3X0 281 aa11.02□□□□□ -0.65
SMPD4-218ENST00000482171 G3V2L1 256 aa11.02□□□□□ -0.65
SMPD4-218ENST00000482171 UMPSP11172 480 aa11.02□□□□□ -0.65
SMPD4-218ENST00000482171 MYCLP1P12525 358 aaPredicted RBP11.02□□□□□ -0.65
SMPD4-218ENST00000482171 CLCNKAP51800 687 aa11.02□□□□□ -0.65
SMPD4-218ENST00000482171 TAB1Q15750 504 aa11.02□□□□□ -0.65
SMPD4-218ENST00000482171 INTS11Q5TA45 600 aaKnown RBP11.02□□□□□ -0.65
SMPD4-218ENST00000482171 ISCA2Q86U28 154 aa11.02□□□□□ -0.65
SMPD4-218ENST00000482171 AADATQ8N5Z0 425 aa11.02□□□□□ -0.65
SMPD4-218ENST00000482171 XAGE5Q8WWM1 108 aa11.02□□□□□ -0.65
SMPD4-218ENST00000482171 LINC01599Q8WXQ3 324 aa11.02□□□□□ -0.65
SMPD4-218ENST00000482171 SLC32A1Q9H598 525 aa11.02□□□□□ -0.65
SMPD4-218ENST00000482171 KLHL28Q9NXS3 571 aa11.02□□□□□ -0.65
SMPD4-218ENST00000482171 PTBP2Q9UKA9 531 aaKnown RBP11.02□□□□□ -0.65
SMPD4-218ENST00000482171 OGDHLQ9ULD0 1010 aa11.02□□□□□ -0.65
SMPD4-218ENST00000482171 VPS4AQ9UN37 437 aa11.02□□□□□ -0.65
SMPD4-218ENST00000482171 DHRS7Q9Y394 339 aa11.02□□□□□ -0.65
SMPD4-218ENST00000482171 AIREO43918 545 aa11.01□□□□□ -0.65
SMPD4-218ENST00000482171 HMGCLP35914 325 aa11.01□□□□□ -0.65
SMPD4-218ENST00000482171 RPS7P62081 194 aaKnown RBP11.01□□□□□ -0.65
SMPD4-218ENST00000482171 RELAQ04206 551 aa11.01□□□□□ -0.65
SMPD4-218ENST00000482171 ZNF423Q2M1K9 1284 aa11.01□□□□□ -0.65
SMPD4-218ENST00000482171 COLEC12Q5KU26 742 aa11.01□□□□□ -0.65
SMPD4-218ENST00000482171 OTUD1Q5VV17 481 aaPredicted RBP11.01□□□□□ -0.65
SMPD4-218ENST00000482171 NCEH1Q6PIU2 408 aa11.01□□□□□ -0.65
SMPD4-218ENST00000482171 UBE2J2Q8N2K1 259 aa11.01□□□□□ -0.65
SMPD4-218ENST00000482171 ARRDC2Q8TBH0 407 aa11.01□□□□□ -0.65
SMPD4-218ENST00000482171 MGME1Q9BQP7 344 aa11.01□□□□□ -0.65
SMPD4-218ENST00000482171 ZSCAN5AQ9BUG6 496 aa11.01□□□□□ -0.65
SMPD4-218ENST00000482171 HERC2P3Q9BVR0 1158 aa11.01□□□□□ -0.65
SMPD4-218ENST00000482171 C20orf27Q9GZN8 174 aa11.01□□□□□ -0.65
SMPD4-218ENST00000482171 ZDHHC7Q9NXF8 308 aa11.01□□□□□ -0.65
SMPD4-218ENST00000482171 PLAGL1Q9UM63 463 aa11.01□□□□□ -0.65
SMPD4-218ENST00000482171 KCNK6Q9Y257 313 aa11.01□□□□□ -0.65
SMPD4-218ENST00000482171 PTPRZ1P23471 2315 aaPredicted RBP11.01□□□□□ -0.65
SMPD4-218ENST00000482171 TRIP12Q14669 1992 aaPredicted RBP11.01□□□□□ -0.65
SMPD4-218ENST00000482171 FUOMA2VDF0 154 aa11.01□□□□□ -0.65
SMPD4-218ENST00000482171 HIDE1A8MVS5 230 aa11.01□□□□□ -0.65
SMPD4-218ENST00000482171 FAM220BPB1ANY3 271 aa11.01□□□□□ -0.65
SMPD4-218ENST00000482171 KCNA5P22460 613 aa11.01□□□□□ -0.65
SMPD4-218ENST00000482171 SLC6A2P23975 617 aa11.01□□□□□ -0.65
SMPD4-218ENST00000482171 ELK4P28324 431 aa11.01□□□□□ -0.65
SMPD4-218ENST00000482171 FMO3P31513 532 aa11.01□□□□□ -0.65
SMPD4-218ENST00000482171 SGSHP51688 502 aa11.01□□□□□ -0.65
SMPD4-218ENST00000482171 DAG1Q14118 895 aa11.01□□□□□ -0.65
SMPD4-218ENST00000482171 SLBPQ14493 270 aaKnown RBP eCLIP11.01□□□□□ -0.65
SMPD4-218ENST00000482171 GPAT3Q53EU6 434 aa11.01□□□□□ -0.65
SMPD4-218ENST00000482171 LRRC58Q96CX6 371 aa11.01□□□□□ -0.65
SMPD4-218ENST00000482171 SLC29A1Q99808 456 aa11.01□□□□□ -0.65
SMPD4-218ENST00000482171 DPEP2Q9H4A9 486 aa11.01□□□□□ -0.65
SMPD4-218ENST00000482171 CCNB1IP1Q9NPC3 277 aa11.01□□□□□ -0.65
SMPD4-218ENST00000482171 FBXL12Q9NXK8 326 aa11.01□□□□□ -0.65
SMPD4-218ENST00000482171 ITM2BQ9Y287 266 aa11.01□□□□□ -0.65
SMPD4-218ENST00000482171 PCDHGA11Q9Y5H2 935 aa11.01□□□□□ -0.65
SMPD4-218ENST00000482171 NRXN2Q9P2S2 1712 aa11.01□□□□□ -0.65
SMPD4-218ENST00000482171 ZNF99A8MXY4 864 aaPredicted RBP11.01□□□□□ -0.65
SMPD4-218ENST00000482171 PPP6CO00743 305 aa11.01□□□□□ -0.65
SMPD4-218ENST00000482171 SOCS5O75159 536 aa11.01□□□□□ -0.65
SMPD4-218ENST00000482171 SNAP29O95721 258 aa11.01□□□□□ -0.65
SMPD4-218ENST00000482171 SRCP12931 536 aa11.01□□□□□ -0.65
SMPD4-218ENST00000482171 BPIP17213 487 aa11.01□□□□□ -0.65
SMPD4-218ENST00000482171 GSK3BP49841 420 aa11.01□□□□□ -0.65
SMPD4-218ENST00000482171 MEF2AQ02078 507 aaPredicted RBP11.01□□□□□ -0.65
SMPD4-218ENST00000482171 PTGR1Q14914 329 aa11.01□□□□□ -0.65
SMPD4-218ENST00000482171 DHCR24Q15392 516 aa11.01□□□□□ -0.65
SMPD4-218ENST00000482171 FAM26DQ5JW98 314 aa11.01□□□□□ -0.65
SMPD4-218ENST00000482171 FAM129CQ86XR2 697 aa11.01□□□□□ -0.65
SMPD4-218ENST00000482171 ZNF784Q8NCA9 323 aaPredicted RBP11.01□□□□□ -0.65
SMPD4-218ENST00000482171 MDGA1Q8NFP4 955 aa11.01□□□□□ -0.65
SMPD4-218ENST00000482171 HMGB4Q8WW32 186 aa11.01□□□□□ -0.65
SMPD4-218ENST00000482171 MYDGFQ969H8 173 aa11.01□□□□□ -0.65
SMPD4-218ENST00000482171 PTERQ96BW5 349 aa11.01□□□□□ -0.65
SMPD4-218ENST00000482171 AHCYL2Q96HN2 611 aaKnown RBP11.01□□□□□ -0.65
SMPD4-218ENST00000482171 MUS81Q96NY9 551 aa11.01□□□□□ -0.65
SMPD4-218ENST00000482171 CRNNQ9UBG3 495 aaPredicted RBP11.01□□□□□ -0.65
SMPD4-218ENST00000482171 EMCNQ9ULC0 261 aa11.01□□□□□ -0.65
SMPD4-218ENST00000482171 ARFGEF1Q9Y6D6 1849 aa11.01□□□□□ -0.65
SMPD4-218ENST00000482171 QSER1Q2KHR3 1735 aa11.01□□□□□ -0.65
SMPD4-218ENST00000482171 KRT87PA6NCN2 255 aa11.01□□□□□ -0.65
SMPD4-218ENST00000482171 TSPAN6O43657 245 aa11.01□□□□□ -0.65
SMPD4-218ENST00000482171 DDX6P26196 483 aaKnown RBP eCLIP11.01□□□□□ -0.65
SMPD4-218ENST00000482171 PIGFQ07326 219 aa11.01□□□□□ -0.65
SMPD4-218ENST00000482171 TMEM115Q12893 351 aaPredicted RBP11.01□□□□□ -0.65
SMPD4-218ENST00000482171 HKDC1Q2TB90 917 aa11.01□□□□□ -0.65
SMPD4-218ENST00000482171 SNAP47Q5SQN1 464 aa11.01□□□□□ -0.65
SMPD4-218ENST00000482171 PLEKHM3Q6ZWE6 761 aa11.01□□□□□ -0.65
SMPD4-218ENST00000482171 TMEM126BQ8IUX1 230 aa11.01□□□□□ -0.65
SMPD4-218ENST00000482171 PACRGLQ8N7B6 248 aa11.01□□□□□ -0.65
SMPD4-218ENST00000482171 SUN5Q8TC36 379 aa11.01□□□□□ -0.65
SMPD4-218ENST00000482171 KLF16Q9BXK1 252 aaPredicted RBP11.01□□□□□ -0.65
SMPD4-218ENST00000482171 TRPV5Q9NQA5 729 aa11.01□□□□□ -0.65
SMPD4-218ENST00000482171 RPS6KA6Q9UK32 745 aa11.01□□□□□ -0.65
SMPD4-218ENST00000482171 TSPAN9O75954 239 aa11□□□□□ -0.65
SMPD4-218ENST00000482171 ACTR1BP42025 376 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms