RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 ESRRBO95718 433 aa14.23□□□□□ -0.13
CXCL12-201ENST00000343575 TNFP01375 233 aa14.23□□□□□ -0.13
CXCL12-201ENST00000343575 PRDX6P30041 224 aa14.23□□□□□ -0.13
CXCL12-201ENST00000343575 CPOXP36551 454 aa14.23□□□□□ -0.13
CXCL12-201ENST00000343575 ACTR1BP42025 376 aa14.23□□□□□ -0.13
CXCL12-201ENST00000343575 CSNK1EP49674 416 aaKnown RBP14.23□□□□□ -0.13
CXCL12-201ENST00000343575 IDH3AP50213 366 aa14.23□□□□□ -0.13
CXCL12-201ENST00000343575 ACTR1AP61163 376 aa14.23□□□□□ -0.13
CXCL12-201ENST00000343575 NAA20P61599 178 aa14.23□□□□□ -0.13
CXCL12-201ENST00000343575 TAP2Q03519 686 aa14.23□□□□□ -0.13
CXCL12-201ENST00000343575 BTKQ06187 659 aa14.23□□□□□ -0.13
CXCL12-201ENST00000343575 NAE1Q13564 534 aa14.23□□□□□ -0.13
CXCL12-201ENST00000343575 FASTKQ14296 549 aaKnown RBP14.23□□□□□ -0.13
CXCL12-201ENST00000343575 RPE65Q16518 533 aa14.23□□□□□ -0.13
CXCL12-201ENST00000343575 SLC9B1Q4ZJI4 515 aa14.23□□□□□ -0.13
CXCL12-201ENST00000343575 EPGNQ6UW88 154 aa14.23□□□□□ -0.13
CXCL12-201ENST00000343575 SPATA24Q86W54 205 aa14.23□□□□□ -0.13
CXCL12-201ENST00000343575 DCUN1D3Q8IWE4 304 aa14.23□□□□□ -0.13
CXCL12-201ENST00000343575 SFTPA2Q8IWL1 248 aa14.23□□□□□ -0.13
CXCL12-201ENST00000343575 KLHDC8AQ8IYD2 350 aa14.23□□□□□ -0.13
CXCL12-201ENST00000343575 TCAIMQ8N3R3 496 aa14.23□□□□□ -0.13
CXCL12-201ENST00000343575 CATSPER1Q8NEC5 780 aa14.23□□□□□ -0.13
CXCL12-201ENST00000343575 RILPQ96NA2 401 aa14.23□□□□□ -0.13
CXCL12-201ENST00000343575 IL17FQ96PD4 163 aa14.23□□□□□ -0.13
CXCL12-201ENST00000343575 ZNF624Q9P2J8 865 aaPredicted RBP14.23□□□□□ -0.13
CXCL12-201ENST00000343575 DNAJC15Q9Y5T4 150 aa14.23□□□□□ -0.13
CXCL12-201ENST00000343575 PDZK1P1A8MUH7 402 aa14.23□□□□□ -0.13
CXCL12-201ENST00000343575 HDAC3O15379 428 aa14.23□□□□□ -0.13
CXCL12-201ENST00000343575 OR4F21O95013 312 aa14.23□□□□□ -0.13
CXCL12-201ENST00000343575 MLYCDO95822 493 aa14.23□□□□□ -0.13
CXCL12-201ENST00000343575 ERGP11308 486 aa14.23□□□□□ -0.13
CXCL12-201ENST00000343575 RANBP1P43487 201 aa14.23□□□□□ -0.13
CXCL12-201ENST00000343575 RPL5P46777 297 aaKnown RBP14.23□□□□□ -0.13
CXCL12-201ENST00000343575 CPA2P48052 419 aa14.23□□□□□ -0.13
CXCL12-201ENST00000343575 KANK2Q63ZY3 851 aa14.23□□□□□ -0.13
CXCL12-201ENST00000343575 PMS2CLQ68D20 193 aa14.23□□□□□ -0.13
CXCL12-201ENST00000343575 PGM2L1Q6PCE3 622 aa14.23□□□□□ -0.13
CXCL12-201ENST00000343575 DCP2Q8IU60 420 aaKnown RBP14.23□□□□□ -0.13
CXCL12-201ENST00000343575 TBC1D21Q8IYX1 336 aa14.23□□□□□ -0.13
CXCL12-201ENST00000343575 PHACTR4Q8IZ21 702 aa14.23□□□□□ -0.13
CXCL12-201ENST00000343575 ACTRT2Q8TDY3 377 aa14.23□□□□□ -0.13
CXCL12-201ENST00000343575 GAB3Q8WWW8 586 aa14.23□□□□□ -0.13
CXCL12-201ENST00000343575 RAD51AP1Q96B01 352 aa14.23□□□□□ -0.13
CXCL12-201ENST00000343575 CMTM5Q96DZ9 223 aa14.23□□□□□ -0.13
CXCL12-201ENST00000343575 NUF2Q9BZD4 464 aa14.23□□□□□ -0.13
CXCL12-201ENST00000343575 TUBB1Q9H4B7 451 aa14.23□□□□□ -0.13
CXCL12-201ENST00000343575 TMEM74BQ9NUR3 256 aa14.23□□□□□ -0.13
CXCL12-201ENST00000343575 IMP3Q9NV31 184 aaKnown RBP14.23□□□□□ -0.13
CXCL12-201ENST00000343575 FIS1Q9Y3D6 152 aa14.23□□□□□ -0.13
CXCL12-201ENST00000343575 TNRC6BQ9UPQ9 1833 aaKnown RBP14.22□□□□□ -0.13
CXCL12-201ENST00000343575 WDR47O94967 919 aa14.22□□□□□ -0.13
CXCL12-201ENST00000343575 CSF2P04141 144 aa14.22□□□□□ -0.13
CXCL12-201ENST00000343575 ADRM1Q16186 407 aa14.22□□□□□ -0.13
CXCL12-201ENST00000343575 MMEL1Q495T6 779 aa14.22□□□□□ -0.13
CXCL12-201ENST00000343575 PRAMEF14Q5SWL7 426 aa14.22□□□□□ -0.13
CXCL12-201ENST00000343575 TTC23LQ6PF05 361 aa14.22□□□□□ -0.13
CXCL12-201ENST00000343575 LPCAT2Q7L5N7 544 aa14.22□□□□□ -0.13
CXCL12-201ENST00000343575 LRRC70Q7Z2Q7 622 aa14.22□□□□□ -0.13
CXCL12-201ENST00000343575 CLYBLQ8N0X4 340 aa14.22□□□□□ -0.13
CXCL12-201ENST00000343575 ICA1LQ8NDH6 482 aa14.22□□□□□ -0.13
CXCL12-201ENST00000343575 OR4F6Q8NGB9 312 aa14.22□□□□□ -0.13
CXCL12-201ENST00000343575 NTMT1Q9BV86 223 aa14.22□□□□□ -0.13
CXCL12-201ENST00000343575 LRRC61Q9BV99 259 aa14.22□□□□□ -0.13
CXCL12-201ENST00000343575 TIMMDC1Q9NPL8 285 aa14.22□□□□□ -0.13
CXCL12-201ENST00000343575 BCAP29Q9UHQ4 241 aa14.22□□□□□ -0.13
CXCL12-201ENST00000343575 APOBEC2Q9Y235 224 aaKnown RBP14.22□□□□□ -0.13
CXCL12-201ENST00000343575 TIMM22Q9Y584 194 aa14.22□□□□□ -0.13
CXCL12-201ENST00000343575 PTGDR2Q9Y5Y4 395 aa14.22□□□□□ -0.13
CXCL12-201ENST00000343575 WDFY4Q6ZS81 3184 aa14.21□□□□□ -0.13
CXCL12-201ENST00000343575 AZIN1O14977 448 aa14.21□□□□□ -0.13
CXCL12-201ENST00000343575 VILLO15195 856 aa14.21□□□□□ -0.13
CXCL12-201ENST00000343575 DENRO43583 198 aaKnown RBP14.21□□□□□ -0.13
CXCL12-201ENST00000343575 MTHFD1P11586 935 aaKnown RBP14.21□□□□□ -0.13
CXCL12-201ENST00000343575 IMPDH2P12268 514 aa14.21□□□□□ -0.13
CXCL12-201ENST00000343575 NME1P15531 152 aaKnown RBP14.21□□□□□ -0.13
CXCL12-201ENST00000343575 EPB42P16452 691 aa14.21□□□□□ -0.13
CXCL12-201ENST00000343575 NXPH1P58417 271 aa14.21□□□□□ -0.13
CXCL12-201ENST00000343575 C1orf61Q13536 156 aa14.21□□□□□ -0.13
CXCL12-201ENST00000343575 PDK3Q15120 406 aa14.21□□□□□ -0.13
CXCL12-201ENST00000343575 RBBP7Q16576 425 aa14.21□□□□□ -0.13
CXCL12-201ENST00000343575 PLK5Q496M5 336 aa14.21□□□□□ -0.13
CXCL12-201ENST00000343575 TCHHL1Q5QJ38 904 aaPredicted RBP14.21□□□□□ -0.13
CXCL12-201ENST00000343575 B3GNT6Q6ZMB0 384 aa14.21□□□□□ -0.13
CXCL12-201ENST00000343575 GPRIN3Q6ZVF9 776 aa14.21□□□□□ -0.13
CXCL12-201ENST00000343575 BMP8AQ7Z5Y6 402 aa14.21□□□□□ -0.13
CXCL12-201ENST00000343575 THOC6Q86W42 341 aaKnown RBP14.21□□□□□ -0.13
CXCL12-201ENST00000343575 RBM12BQ8IXT5 1001 aaKnown RBP14.21□□□□□ -0.13
CXCL12-201ENST00000343575 RGL4Q8IZJ4 473 aa14.21□□□□□ -0.13
CXCL12-201ENST00000343575 MARVELD2Q8N4S9 558 aa14.21□□□□□ -0.13
CXCL12-201ENST00000343575 FBXL6Q8N531 539 aa14.21□□□□□ -0.13
CXCL12-201ENST00000343575 PATE1Q8WXA2 126 aa14.21□□□□□ -0.13
CXCL12-201ENST00000343575 ATL1Q8WXF7 558 aa14.21□□□□□ -0.13
CXCL12-201ENST00000343575 PPP1R36Q96LQ0 422 aa14.21□□□□□ -0.13
CXCL12-201ENST00000343575 CAMK1GQ96NX5 476 aa14.21□□□□□ -0.13
CXCL12-201ENST00000343575 OR52B2Q96RD2 323 aa14.21□□□□□ -0.13
CXCL12-201ENST00000343575 FERD3LQ96RJ6 166 aa14.21□□□□□ -0.13
CXCL12-201ENST00000343575 SGPP1Q9BX95 441 aa14.21□□□□□ -0.13
CXCL12-201ENST00000343575 TRIT1Q9H3H1 467 aaKnown RBP14.21□□□□□ -0.13
CXCL12-201ENST00000343575 WDR55Q9H6Y2 383 aaPredicted RBP14.21□□□□□ -0.13
CXCL12-201ENST00000343575 DNAJC28Q9NX36 388 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms