RNA–Protein interactions for RNA: ENST00000254193.10

SNRPA1-201, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA1, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-201ENST00000254193 GP5P40197 560 aa17.23■□□□□ 0.35
SNRPA1-201ENST00000254193 PRDX1Q06830 199 aaKnown RBP17.23■□□□□ 0.35
SNRPA1-201ENST00000254193 TAF1BQ53T94 588 aaPredicted RBP17.23■□□□□ 0.35
SNRPA1-201ENST00000254193 ZC3H12BQ5HYM0 836 aaKnown RBP17.23■□□□□ 0.35
SNRPA1-201ENST00000254193 ATP1A1-AS1Q5TC04 95 aa17.23■□□□□ 0.35
SNRPA1-201ENST00000254193 THEMIS2Q5TEJ8 643 aa17.23■□□□□ 0.35
SNRPA1-201ENST00000254193 C1orf189Q5VU69 101 aa17.23■□□□□ 0.35
SNRPA1-201ENST00000254193 ICE2Q659A1 982 aa17.23■□□□□ 0.35
SNRPA1-201ENST00000254193 TLDC1Q6P9B6 456 aa17.23■□□□□ 0.35
SNRPA1-201ENST00000254193 ZNF517Q6ZMY9 492 aaPredicted RBP17.23■□□□□ 0.35
SNRPA1-201ENST00000254193 PDLIM5Q96HC4 596 aaKnown RBP17.23■□□□□ 0.35
SNRPA1-201ENST00000254193 RBBP8Q99708 897 aa17.23■□□□□ 0.35
SNRPA1-201ENST00000254193 ATG10Q9H0Y0 220 aa17.23■□□□□ 0.35
SNRPA1-201ENST00000254193 STARD5Q9NSY2 213 aa17.23■□□□□ 0.35
SNRPA1-201ENST00000254193 MTRF1LQ9UGC7 380 aaKnown RBP17.23■□□□□ 0.35
SNRPA1-201ENST00000254193 KCND3Q9UK17 655 aa17.23■□□□□ 0.35
SNRPA1-201ENST00000254193 LOC105369274A0A096LPK9 316 aa17.22■□□□□ 0.35
SNRPA1-201ENST00000254193 LOC102723532A0A0G2JNH3 316 aa17.22■□□□□ 0.35
SNRPA1-201ENST00000254193 OR2A25A4D2G3 310 aa17.22■□□□□ 0.35
SNRPA1-201ENST00000254193 ERVH48-1M5A8F1 160 aa17.22■□□□□ 0.35
SNRPA1-201ENST00000254193 CDC7O00311 574 aa17.22■□□□□ 0.35
SNRPA1-201ENST00000254193 ATXN7O15265 892 aaPredicted RBP17.22■□□□□ 0.35
SNRPA1-201ENST00000254193 HBQ1P09105 142 aa17.22■□□□□ 0.35
SNRPA1-201ENST00000254193 HIST1H2AGP0C0S8 130 aaPredicted RBP17.22■□□□□ 0.35
SNRPA1-201ENST00000254193 HIST1H2ADP20671 130 aa17.22■□□□□ 0.35
SNRPA1-201ENST00000254193 SLC12A2P55011 1212 aa17.22■□□□□ 0.35
SNRPA1-201ENST00000254193 VSX2P58304 361 aaPredicted RBP17.22■□□□□ 0.35
SNRPA1-201ENST00000254193 RPS18P62269 152 aaKnown RBP17.22■□□□□ 0.35
SNRPA1-201ENST00000254193 POU4F1Q01851 419 aa17.22■□□□□ 0.35
SNRPA1-201ENST00000254193 NAE1Q13564 534 aa17.22■□□□□ 0.35
SNRPA1-201ENST00000254193 USP10Q14694 798 aaKnown RBP17.22■□□□□ 0.35
SNRPA1-201ENST00000254193 EFTUD2Q15029 972 aaKnown RBP eCLIP17.22■□□□□ 0.356e-8■■■■□ 23.5
SNRPA1-201ENST00000254193 TBR1Q16650 682 aa17.22■□□□□ 0.35
SNRPA1-201ENST00000254193 UBAP2Q5T6F2 1119 aaKnown RBP17.22■□□□□ 0.35
SNRPA1-201ENST00000254193 FRMPD2BQ6IN97 320 aa17.22■□□□□ 0.35
SNRPA1-201ENST00000254193 FBXO42Q6P3S6 717 aa17.22■□□□□ 0.35
SNRPA1-201ENST00000254193 AGTRAPQ6RW13 159 aa17.22■□□□□ 0.35
SNRPA1-201ENST00000254193 OR4N4Q8N0Y3 316 aa17.22■□□□□ 0.35
SNRPA1-201ENST00000254193 NKAPQ8N5F7 415 aaKnown RBP17.22■□□□□ 0.35
SNRPA1-201ENST00000254193 ANKRD49Q8WVL7 239 aa17.22■□□□□ 0.35
SNRPA1-201ENST00000254193 ALKBH8Q96BT7 664 aaKnown RBP17.22■□□□□ 0.35
SNRPA1-201ENST00000254193 HIST1H2AHQ96KK5 128 aa17.22■□□□□ 0.35
SNRPA1-201ENST00000254193 HIST1H2AJQ99878 128 aa17.22■□□□□ 0.35
SNRPA1-201ENST00000254193 SELENOSQ9BQE4 189 aa17.22■□□□□ 0.35
SNRPA1-201ENST00000254193 PLCD4Q9BRC7 762 aa17.22■□□□□ 0.35
SNRPA1-201ENST00000254193 H2AFJQ9BTM1 129 aa17.22■□□□□ 0.35
SNRPA1-201ENST00000254193 ACTL8Q9H568 366 aa17.22■□□□□ 0.35
SNRPA1-201ENST00000254193 GPAMQ9HCL2 828 aa17.22■□□□□ 0.35
SNRPA1-201ENST00000254193 CCDC177Q9NQR7 707 aaPredicted RBP17.22■□□□□ 0.35
SNRPA1-201ENST00000254193 ARL15Q9NXU5 204 aa17.22■□□□□ 0.35
SNRPA1-201ENST00000254193 UTP6Q9NYH9 597 aaKnown RBP17.22■□□□□ 0.35
SNRPA1-201ENST00000254193 NINJ2Q9NZG7 142 aa17.22■□□□□ 0.35
SNRPA1-201ENST00000254193 DHCR7Q9UBM7 475 aaKnown RBP17.22■□□□□ 0.35
SNRPA1-201ENST00000254193 PCDHGA6Q9Y5G7 932 aa17.22■□□□□ 0.35
SNRPA1-201ENST00000254193 NPEPPSL1A6NEC2 478 aa17.21■□□□□ 0.35
SNRPA1-201ENST00000254193 PHGDHO43175 533 aaKnown RBP17.21■□□□□ 0.35
SNRPA1-201ENST00000254193 CCNDBP1O95273 360 aa17.21■□□□□ 0.35
SNRPA1-201ENST00000254193 ITGB2P05107 769 aa17.21■□□□□ 0.35
SNRPA1-201ENST00000254193 ECHS1P30084 290 aa17.21■□□□□ 0.35
SNRPA1-201ENST00000254193 TBPL1P62380 186 aa17.21■□□□□ 0.35
SNRPA1-201ENST00000254193 RPS15P62841 145 aaKnown RBP17.21■□□□□ 0.35
SNRPA1-201ENST00000254193 MC1RQ01726 317 aa17.21■□□□□ 0.35
SNRPA1-201ENST00000254193 CDC20Q12834 499 aa17.21■□□□□ 0.35
SNRPA1-201ENST00000254193 ILF2Q12905 390 aaKnown RBP17.21■□□□□ 0.35
SNRPA1-201ENST00000254193 ERV3-1Q14264 604 aa17.21■□□□□ 0.35
SNRPA1-201ENST00000254193 ZXDCQ2QGD7 858 aaPredicted RBP17.21■□□□□ 0.35
SNRPA1-201ENST00000254193 LINC00303Q3SY05 128 aa17.21■□□□□ 0.35
SNRPA1-201ENST00000254193 ZNF385CQ66K41 422 aaPredicted RBP17.21■□□□□ 0.35
SNRPA1-201ENST00000254193 RHBDD2Q6NTF9 364 aa17.21■□□□□ 0.35
SNRPA1-201ENST00000254193 FAM198BQ6UWH4 519 aa17.21■□□□□ 0.35
SNRPA1-201ENST00000254193 SBSNQ6UWP8 590 aa17.21■□□□□ 0.35
SNRPA1-201ENST00000254193 RNF44Q7L0R7 432 aa17.21■□□□□ 0.35
SNRPA1-201ENST00000254193 SPATA6LQ8N4H0 392 aa17.21■□□□□ 0.35
SNRPA1-201ENST00000254193 MED8Q96G25 268 aa17.21■□□□□ 0.35
SNRPA1-201ENST00000254193 GPR22Q99680 433 aa17.21■□□□□ 0.35
SNRPA1-201ENST00000254193 NDC1Q9BTX1 674 aa17.21■□□□□ 0.35
SNRPA1-201ENST00000254193 GPR87Q9BY21 358 aa17.21■□□□□ 0.35
SNRPA1-201ENST00000254193 TRIM54Q9BYV2 358 aa17.21■□□□□ 0.35
SNRPA1-201ENST00000254193 FAM129AQ9BZQ8 928 aa17.21■□□□□ 0.35
SNRPA1-201ENST00000254193 UNKQ9C0B0 810 aaKnown RBP17.21■□□□□ 0.35
SNRPA1-201ENST00000254193 CUEDC1Q9NWM3 386 aaPredicted RBP17.21■□□□□ 0.35
SNRPA1-201ENST00000254193 FARSAQ9Y285 508 aaKnown RBP17.21■□□□□ 0.35
SNRPA1-201ENST00000254193 PABPN1LA6NDY0 278 aaKnown RBP17.2■□□□□ 0.34
SNRPA1-201ENST00000254193 CREG1O75629 220 aa17.2■□□□□ 0.34
SNRPA1-201ENST00000254193 GUCA1CO95843 209 aa17.2■□□□□ 0.34
SNRPA1-201ENST00000254193 EIF2S1P05198 315 aaKnown RBP17.2■□□□□ 0.34
SNRPA1-201ENST00000254193 CAPN1P07384 714 aa17.2■□□□□ 0.34
SNRPA1-201ENST00000254193 AGXTP21549 392 aa17.2■□□□□ 0.34
SNRPA1-201ENST00000254193 PTPN4P29074 926 aa17.2■□□□□ 0.34
SNRPA1-201ENST00000254193 SPRP35270 261 aaPredicted RBP17.2■□□□□ 0.34
SNRPA1-201ENST00000254193 ABATP80404 500 aa17.2■□□□□ 0.34
SNRPA1-201ENST00000254193 NFKB2Q00653 900 aa17.2■□□□□ 0.34
SNRPA1-201ENST00000254193 NAA25Q14CX7 972 aa17.2■□□□□ 0.34
SNRPA1-201ENST00000254193 TCTE1Q5JU00 501 aa17.2■□□□□ 0.34
SNRPA1-201ENST00000254193 WASHC2DQ5SRD0 308 aa17.2■□□□□ 0.34
SNRPA1-201ENST00000254193 GRTP1Q5TC63 336 aa17.2■□□□□ 0.34
SNRPA1-201ENST00000254193 FAM69BQ5VUD6 431 aa17.2■□□□□ 0.34
SNRPA1-201ENST00000254193 PRAMEF13Q5VWM6 474 aa17.2■□□□□ 0.34
SNRPA1-201ENST00000254193 ZNF425Q6IV72 752 aa17.2■□□□□ 0.34
SNRPA1-201ENST00000254193 ADCK2Q7Z695 626 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms