RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 PRMT8Q9NR22 394 aaPredicted RBP4.79□□□□□ -1.64
LINC00397-202ENST00000606785 ZNF701Q9NV72 531 aaPredicted RBP4.79□□□□□ -1.64
LINC00397-202ENST00000606785 RBM28Q9NW13 759 aaKnown RBP4.79□□□□□ -1.64
LINC00397-202ENST00000606785 P4HTMQ9NXG6 502 aa4.79□□□□□ -1.64
LINC00397-202ENST00000606785 HMG20BQ9P0W2 317 aa4.79□□□□□ -1.64
LINC00397-202ENST00000606785 HOOK1Q9UJC3 728 aaKnown RBP4.79□□□□□ -1.64
LINC00397-202ENST00000606785 DLGAP4Q9Y2H0 992 aa4.79□□□□□ -1.64
LINC00397-202ENST00000606785 TMED3Q9Y3Q3 217 aa4.79□□□□□ -1.64
LINC00397-202ENST00000606785 HBS1LQ9Y450 684 aaKnown RBP4.79□□□□□ -1.64
LINC00397-202ENST00000606785 RNF103-CHMP3A0A140T963 221 aa4.78□□□□□ -1.64
LINC00397-202ENST00000606785 C5orf51A6NDU8 294 aa4.78□□□□□ -1.64
LINC00397-202ENST00000606785 SLC9B1P1A6NJY1 282 aa4.78□□□□□ -1.64
LINC00397-202ENST00000606785 ZNF587BE7ETH6 402 aa4.78□□□□□ -1.64
LINC00397-202ENST00000606785 H3BNX3 289 aa4.78□□□□□ -1.64
LINC00397-202ENST00000606785 RNF103O00237 685 aa4.78□□□□□ -1.64
LINC00397-202ENST00000606785 PLOD2O00469 737 aa4.78□□□□□ -1.64
LINC00397-202ENST00000606785 ATP9AO75110 1047 aa4.78□□□□□ -1.64
LINC00397-202ENST00000606785 PDE9AO76083 593 aa4.78□□□□□ -1.64
LINC00397-202ENST00000606785 TOMM40O96008 361 aa4.78□□□□□ -1.64
LINC00397-202ENST00000606785 JAK1P23458 1154 aa4.78□□□□□ -1.64
LINC00397-202ENST00000606785 CD38P28907 300 aa4.78□□□□□ -1.64
LINC00397-202ENST00000606785 MNDAP41218 407 aa4.78□□□□□ -1.64
LINC00397-202ENST00000606785 SERPINH1P50454 418 aaKnown RBP4.78□□□□□ -1.64
LINC00397-202ENST00000606785 LUMP51884 338 aaPredicted RBP4.78□□□□□ -1.64
LINC00397-202ENST00000606785 PDX1P52945 283 aa4.78□□□□□ -1.64
LINC00397-202ENST00000606785 CASP9P55211 416 aa4.78□□□□□ -1.64
LINC00397-202ENST00000606785 UCP2P55851 309 aa4.78□□□□□ -1.64
LINC00397-202ENST00000606785 SEC61A1P61619 476 aaKnown RBP4.78□□□□□ -1.64
LINC00397-202ENST00000606785 RELQ04864 619 aaPredicted RBP4.78□□□□□ -1.64
LINC00397-202ENST00000606785 ARHGAP1Q07960 439 aa4.78□□□□□ -1.64
LINC00397-202ENST00000606785 ZNF415Q09FC8 603 aa4.78□□□□□ -1.64
LINC00397-202ENST00000606785 MFAP5Q13361 173 aa4.78□□□□□ -1.64
LINC00397-202ENST00000606785 ETFDHQ16134 617 aa4.78□□□□□ -1.64
LINC00397-202ENST00000606785 DUOXA1Q1HG43 343 aa4.78□□□□□ -1.64
LINC00397-202ENST00000606785 IFI44LQ53G44 452 aa4.78□□□□□ -1.64
LINC00397-202ENST00000606785 TOR1AIP1Q5JTV8 583 aa4.78□□□□□ -1.64
LINC00397-202ENST00000606785 LRRC38Q5VT99 294 aa4.78□□□□□ -1.64
LINC00397-202ENST00000606785 PRSS55Q6UWB4 352 aaPredicted RBP4.78□□□□□ -1.64
LINC00397-202ENST00000606785 PRSS42Q7Z5A4 293 aa4.78□□□□□ -1.64
LINC00397-202ENST00000606785 RPAINQ86UA6 219 aa4.78□□□□□ -1.64
LINC00397-202ENST00000606785 SATL1Q86VE3 508 aa4.78□□□□□ -1.64
LINC00397-202ENST00000606785 LONP2Q86WA8 852 aa4.78□□□□□ -1.64
LINC00397-202ENST00000606785 MEX3DQ86XN8 651 aaKnown RBP4.78□□□□□ -1.64
LINC00397-202ENST00000606785 KMT5CQ86Y97 462 aa4.78□□□□□ -1.64
LINC00397-202ENST00000606785 KLHDC8AQ8IYD2 350 aa4.78□□□□□ -1.64
LINC00397-202ENST00000606785 DCP1BQ8IZD4 617 aaKnown RBP4.78□□□□□ -1.64
LINC00397-202ENST00000606785 LRRC8CQ8TDW0 803 aa4.78□□□□□ -1.64
LINC00397-202ENST00000606785 CKAP2Q8WWK9 683 aa4.78□□□□□ -1.64
LINC00397-202ENST00000606785 ASB5Q8WWX0 329 aa4.78□□□□□ -1.64
LINC00397-202ENST00000606785 RUFY1Q96T51 708 aa4.78□□□□□ -1.64
LINC00397-202ENST00000606785 SEZ6LQ9BYH1 1024 aa4.78□□□□□ -1.64
LINC00397-202ENST00000606785 P2RY12Q9H244 342 aa4.78□□□□□ -1.64
LINC00397-202ENST00000606785 HPF1Q9NWY4 346 aa4.78□□□□□ -1.64
LINC00397-202ENST00000606785 ELOVL5Q9NYP7 299 aa4.78□□□□□ -1.64
LINC00397-202ENST00000606785 AGTPBP1Q9UPW5 1226 aa4.78□□□□□ -1.64
LINC00397-202ENST00000606785 VDAC3Q9Y277 283 aa4.78□□□□□ -1.64
LINC00397-202ENST00000606785 TRIM17Q9Y577 477 aa4.78□□□□□ -1.64
LINC00397-202ENST00000606785 TEX264Q9Y6I9 313 aa4.78□□□□□ -1.64
LINC00397-202ENST00000606785 TTC3P53804 2025 aa4.78□□□□□ -1.64
LINC00397-202ENST00000606785 FANCIQ9NVI1 1328 aa4.77□□□□□ -1.65
LINC00397-202ENST00000606785 A0A0G2JPF8 293 aa4.77□□□□□ -1.65
LINC00397-202ENST00000606785 A0A1W2PRB8 838 aa4.77□□□□□ -1.65
LINC00397-202ENST00000606785 HNRNPCL3B7ZW38 293 aa4.77□□□□□ -1.65
LINC00397-202ENST00000606785 E9PI62 339 aa4.77□□□□□ -1.65
LINC00397-202ENST00000606785 CACNB4O00305 520 aaPredicted RBP4.77□□□□□ -1.65
LINC00397-202ENST00000606785 SNX3O60493 162 aa4.77□□□□□ -1.65
LINC00397-202ENST00000606785 MOCS2O96007 188 aaPredicted RBP4.77□□□□□ -1.65
LINC00397-202ENST00000606785 SLC4A1P02730 911 aa4.77□□□□□ -1.65
LINC00397-202ENST00000606785 PRSS2P07478 247 aa4.77□□□□□ -1.65
LINC00397-202ENST00000606785 SBK2P0C263 348 aa4.77□□□□□ -1.65
LINC00397-202ENST00000606785 HNRNPCL4P0DMR1 293 aa4.77□□□□□ -1.65
LINC00397-202ENST00000606785 HLA-DOBP13765 273 aa4.77□□□□□ -1.65
LINC00397-202ENST00000606785 PIK3R1P27986 724 aa4.77□□□□□ -1.65
LINC00397-202ENST00000606785 ARRB2P32121 409 aa4.77□□□□□ -1.65
LINC00397-202ENST00000606785 PEX19P40855 299 aa4.77□□□□□ -1.65
LINC00397-202ENST00000606785 HTR6P50406 440 aa4.77□□□□□ -1.65
LINC00397-202ENST00000606785 EVCP57679 992 aa4.77□□□□□ -1.65
LINC00397-202ENST00000606785 DMPKQ09013 629 aa4.77□□□□□ -1.65
LINC00397-202ENST00000606785 ASPRV1Q53RT3 343 aa4.77□□□□□ -1.65
LINC00397-202ENST00000606785 CYP4A22Q5TCH4 519 aa4.77□□□□□ -1.65
LINC00397-202ENST00000606785 FAM46CQ5VWP2 391 aa4.77□□□□□ -1.65
LINC00397-202ENST00000606785 FAM166AQ6J272 317 aa4.77□□□□□ -1.65
LINC00397-202ENST00000606785 FAM171BQ6P995 826 aa4.77□□□□□ -1.65
LINC00397-202ENST00000606785 ANKRD46Q86W74 232 aa4.77□□□□□ -1.65
LINC00397-202ENST00000606785 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.77□□□□□ -1.65
LINC00397-202ENST00000606785 OR4K1Q8NGD4 311 aa4.77□□□□□ -1.65
LINC00397-202ENST00000606785 RNASE8Q8TDE3 154 aaKnown RBP4.77□□□□□ -1.65
LINC00397-202ENST00000606785 TMED6Q8WW62 240 aa4.77□□□□□ -1.65
LINC00397-202ENST00000606785 SLC13A3Q8WWT9 602 aa4.77□□□□□ -1.65
LINC00397-202ENST00000606785 LINGO1Q96FE5 620 aa4.77□□□□□ -1.65
LINC00397-202ENST00000606785 CDKN2AIPNLQ96HQ2 116 aa4.77□□□□□ -1.65
LINC00397-202ENST00000606785 ZNF385AQ96PM9 386 aaKnown RBP4.77□□□□□ -1.65
LINC00397-202ENST00000606785 CDK19Q9BWU1 502 aa4.77□□□□□ -1.65
LINC00397-202ENST00000606785 CSTL1Q9H114 145 aa4.77□□□□□ -1.65
LINC00397-202ENST00000606785 UBTD1Q9HAC8 227 aa4.77□□□□□ -1.65
LINC00397-202ENST00000606785 OLFML3Q9NRN5 406 aa4.77□□□□□ -1.65
LINC00397-202ENST00000606785 OCIAD1Q9NX40 245 aa4.77□□□□□ -1.65
LINC00397-202ENST00000606785 SPHK1Q9NYA1 384 aa4.77□□□□□ -1.65
LINC00397-202ENST00000606785 PTGFRNQ9P2B2 879 aa4.77□□□□□ -1.65
LINC00397-202ENST00000606785 MAD2L2Q9UI95 211 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms