RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 TMEM233B4DJY2 109 aa16.9■□□□□ 0.3
PTPN21-208ENST00000556564 REM1O75628 298 aa16.9■□□□□ 0.3
PTPN21-208ENST00000556564 ATF6P18850 670 aa16.9■□□□□ 0.3
PTPN21-208ENST00000556564 SHMT2P34897 504 aa16.9■□□□□ 0.3
PTPN21-208ENST00000556564 MTPNP58546 118 aa16.9■□□□□ 0.3
PTPN21-208ENST00000556564 SPIN4Q56A73 249 aa16.9■□□□□ 0.3
PTPN21-208ENST00000556564 PIK3C3Q8NEB9 887 aa16.9■□□□□ 0.3
PTPN21-208ENST00000556564 MOSPD2Q8NHP6 518 aa16.9■□□□□ 0.3
PTPN21-208ENST00000556564 HCAR2Q8TDS4 363 aa16.9■□□□□ 0.3
PTPN21-208ENST00000556564 NMD3Q96D46 503 aaKnown RBP16.9■□□□□ 0.3
PTPN21-208ENST00000556564 SLC17A9Q9BYT1 436 aa16.9■□□□□ 0.3
PTPN21-208ENST00000556564 BATF3Q9NR55 127 aa16.9■□□□□ 0.3
PTPN21-208ENST00000556564 ALOX5P09917 674 aa16.9■□□□□ 0.3
PTPN21-208ENST00000556564 SLC6A11P48066 632 aa16.9■□□□□ 0.3
PTPN21-208ENST00000556564 SP140Q13342 867 aa16.9■□□□□ 0.3
PTPN21-208ENST00000556564 ZNF234Q14588 700 aa16.9■□□□□ 0.3
PTPN21-208ENST00000556564 PLEKHS1Q5SXH7 462 aa16.9■□□□□ 0.3
PTPN21-208ENST00000556564 TMEM109Q9BVC6 243 aa16.9■□□□□ 0.3
PTPN21-208ENST00000556564 ALG2Q9H553 416 aa16.9■□□□□ 0.3
PTPN21-208ENST00000556564 MT-ND1P03886 318 aa16.9■□□□□ 0.3
PTPN21-208ENST00000556564 SLC6A4P31645 630 aa16.9■□□□□ 0.3
PTPN21-208ENST00000556564 CLCN7P51798 805 aa16.9■□□□□ 0.3
PTPN21-208ENST00000556564 KIAA1161Q6NSJ0 714 aa16.9■□□□□ 0.3
PTPN21-208ENST00000556564 TERB1Q8NA31 727 aa16.9■□□□□ 0.3
PTPN21-208ENST00000556564 ZNF282Q9UDV7 671 aaPredicted RBP16.9■□□□□ 0.3
PTPN21-208ENST00000556564 AK5Q9Y6K8 562 aa16.9■□□□□ 0.3
PTPN21-208ENST00000556564 ALPPP05187 535 aa16.9■□□□□ 0.3
PTPN21-208ENST00000556564 THEGLP0DJG4 465 aa16.9■□□□□ 0.3
PTPN21-208ENST00000556564 CSNK2A2P19784 350 aaPredicted RBP16.9■□□□□ 0.3
PTPN21-208ENST00000556564 ID2Q02363 134 aa16.9■□□□□ 0.3
PTPN21-208ENST00000556564 PM20D1Q6GTS8 502 aa16.9■□□□□ 0.3
PTPN21-208ENST00000556564 CEP295NLQ96MC4 621 aa16.9■□□□□ 0.3
PTPN21-208ENST00000556564 DNAAF2Q9NVR5 837 aaKnown RBP16.9■□□□□ 0.3
PTPN21-208ENST00000556564 FETUBQ9UGM5 382 aa16.9■□□□□ 0.3
PTPN21-208ENST00000556564 hCG_2039718K7EN88 272 aa16.89■□□□□ 0.3
PTPN21-208ENST00000556564 JUNP05412 331 aaKnown RBP16.89■□□□□ 0.3
PTPN21-208ENST00000556564 LOC100506127A0A0U1RQW1 187 aa16.89■□□□□ 0.29
PTPN21-208ENST00000556564 H7BY64 318 aa16.89■□□□□ 0.29
PTPN21-208ENST00000556564 KHNYNO15037 678 aaKnown RBP16.89■□□□□ 0.29
PTPN21-208ENST00000556564 NPC1O15118 1278 aa16.89■□□□□ 0.29
PTPN21-208ENST00000556564 TNFAIP8O95379 198 aa16.89■□□□□ 0.29
PTPN21-208ENST00000556564 EPOP01588 193 aa16.89■□□□□ 0.29
PTPN21-208ENST00000556564 IFNW1P05000 195 aa16.89■□□□□ 0.29
PTPN21-208ENST00000556564 COX10Q12887 443 aa16.89■□□□□ 0.29
PTPN21-208ENST00000556564 FOXJ1Q92949 421 aa16.89■□□□□ 0.29
PTPN21-208ENST00000556564 PRAP1Q96NZ9 151 aa16.89■□□□□ 0.29
PTPN21-208ENST00000556564 GPR22Q99680 433 aa16.89■□□□□ 0.29
PTPN21-208ENST00000556564 TNFRSF11BO00300 401 aa16.89■□□□□ 0.29
PTPN21-208ENST00000556564 HOXC12P31275 282 aa16.89■□□□□ 0.29
PTPN21-208ENST00000556564 GPR68Q15743 365 aa16.89■□□□□ 0.29
PTPN21-208ENST00000556564 TBL1XR1Q9BZK7 514 aa16.89■□□□□ 0.29
PTPN21-208ENST00000556564 CTPS2Q9NRF8 586 aa16.89■□□□□ 0.29
PTPN21-208ENST00000556564 KIF1CO43896 1103 aaKnown RBP16.89■□□□□ 0.29
PTPN21-208ENST00000556564 PAPSS2O95340 614 aaPredicted RBP16.89■□□□□ 0.29
PTPN21-208ENST00000556564 NIPAL4Q0D2K0 466 aa16.89■□□□□ 0.29
PTPN21-208ENST00000556564 SCAPQ12770 1279 aa16.89■□□□□ 0.29
PTPN21-208ENST00000556564 TMIGD1Q6UXZ0 262 aa16.89■□□□□ 0.29
PTPN21-208ENST00000556564 USP53Q70EK8 1073 aa16.89■□□□□ 0.29
PTPN21-208ENST00000556564 CD244Q9BZW8 370 aa16.89■□□□□ 0.29
PTPN21-208ENST00000556564 MANBAO00462 879 aa16.89■□□□□ 0.29
PTPN21-208ENST00000556564 AGTR2P50052 363 aa16.89■□□□□ 0.29
PTPN21-208ENST00000556564 ZNF572Q7Z3I7 529 aaPredicted RBP16.89■□□□□ 0.29
PTPN21-208ENST00000556564 MMABQ96EY8 250 aaPredicted RBP16.89■□□□□ 0.29
PTPN21-208ENST00000556564 SLC35A5Q9BS91 424 aa16.89■□□□□ 0.29
PTPN21-208ENST00000556564 CDC123O75794 336 aaPredicted RBP16.88■□□□□ 0.29
PTPN21-208ENST00000556564 AHCYP23526 432 aa16.88■□□□□ 0.29
PTPN21-208ENST00000556564 C19orf18Q8NEA5 215 aa16.88■□□□□ 0.29
PTPN21-208ENST00000556564 SH3GL2Q99962 352 aa16.88■□□□□ 0.29
PTPN21-208ENST00000556564 LRMDAQ9H2I8 198 aa16.88■□□□□ 0.29
PTPN21-208ENST00000556564 KPNA4O00629 521 aaPredicted RBP16.88■□□□□ 0.29
PTPN21-208ENST00000556564 DUX1O43812 170 aa16.88■□□□□ 0.29
PTPN21-208ENST00000556564 SGCBQ16585 318 aa16.88■□□□□ 0.29
PTPN21-208ENST00000556564 FBXO43Q4G163 708 aa16.88■□□□□ 0.29
PTPN21-208ENST00000556564 FAM78AQ5JUQ0 283 aa16.88■□□□□ 0.29
PTPN21-208ENST00000556564 SMYD5Q6GMV2 418 aa16.88■□□□□ 0.29
PTPN21-208ENST00000556564 TMEM156Q8N614 296 aa16.88■□□□□ 0.29
PTPN21-208ENST00000556564 SHKBP1Q8TBC3 707 aa16.88■□□□□ 0.29
PTPN21-208ENST00000556564 PIH1D2Q8WWB5 315 aa16.88■□□□□ 0.29
PTPN21-208ENST00000556564 RNF38Q9H0F5 515 aa16.88■□□□□ 0.29
PTPN21-208ENST00000556564 CXCL16Q9H2A7 254 aa16.88■□□□□ 0.29
PTPN21-208ENST00000556564 PFKLP17858 780 aa16.88■□□□□ 0.29
PTPN21-208ENST00000556564 ATP5A1P25705 553 aaKnown RBP16.88■□□□□ 0.29
PTPN21-208ENST00000556564 DCST1Q5T197 706 aa16.88■□□□□ 0.29
PTPN21-208ENST00000556564 ZNF761Q86XN6 746 aaPredicted RBP16.88■□□□□ 0.29
PTPN21-208ENST00000556564 KAT2AQ92830 837 aa16.88■□□□□ 0.29
PTPN21-208ENST00000556564 KIAA1143Q96AT1 154 aaPredicted RBP16.88■□□□□ 0.29
PTPN21-208ENST00000556564 ZCCHC3Q9NUD5 404 aaKnown RBP16.88■□□□□ 0.29
PTPN21-208ENST00000556564 PTGFRNQ9P2B2 879 aa16.88■□□□□ 0.29
PTPN21-208ENST00000556564 CDH22Q9UJ99 828 aa16.88■□□□□ 0.29
PTPN21-208ENST00000556564 LINC01553A4QN01 128 aa16.88■□□□□ 0.29
PTPN21-208ENST00000556564 ZNF860A6NHJ4 632 aa16.88■□□□□ 0.29
PTPN21-208ENST00000556564 DLX3O60479 287 aa16.88■□□□□ 0.29
PTPN21-208ENST00000556564 ERVK-8P63133 956 aa16.88■□□□□ 0.29
PTPN21-208ENST00000556564 PSAPL1Q6NUJ1 521 aa16.88■□□□□ 0.29
PTPN21-208ENST00000556564 PARP8Q8N3A8 854 aa16.88■□□□□ 0.29
PTPN21-208ENST00000556564 KCNA7Q96RP8 456 aa16.88■□□□□ 0.29
PTPN21-208ENST00000556564 KCNS3Q9BQ31 491 aa16.88■□□□□ 0.29
PTPN21-208ENST00000556564 REXO4Q9GZR2 422 aaKnown RBP16.88■□□□□ 0.29
PTPN21-208ENST00000556564 FAM86C2PA6NEL3 165 aa16.88■□□□□ 0.29
PTPN21-208ENST00000556564 TTC23Q5W5X9 447 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms