RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 PRICKLE3O43900 615 aaPredicted RBP11.37□□□□□ -0.59
RAB5C-204ENST00000547517 NRP2O60462 931 aa11.37□□□□□ -0.59
RAB5C-204ENST00000547517 KATNA1O75449 491 aa11.37□□□□□ -0.59
RAB5C-204ENST00000547517 FKBP9O95302 570 aa11.37□□□□□ -0.59
RAB5C-204ENST00000547517 C8GP07360 202 aa11.37□□□□□ -0.59
RAB5C-204ENST00000547517 CTSBP07858 339 aa11.37□□□□□ -0.59
RAB5C-204ENST00000547517 ATXN8OSP0DMR3 200 aa11.37□□□□□ -0.59
RAB5C-204ENST00000547517 F8A1P23610 371 aa11.37□□□□□ -0.59
RAB5C-204ENST00000547517 CMPK1P30085 196 aa11.37□□□□□ -0.59
RAB5C-204ENST00000547517 GRIA3P42263 894 aa11.37□□□□□ -0.59
RAB5C-204ENST00000547517 MAGEA4P43358 317 aa11.37□□□□□ -0.59
RAB5C-204ENST00000547517 GPX6P59796 221 aa11.37□□□□□ -0.59
RAB5C-204ENST00000547517 IL2P60568 153 aa11.37□□□□□ -0.59
RAB5C-204ENST00000547517 SP140Q13342 867 aa11.37□□□□□ -0.59
RAB5C-204ENST00000547517 DNASE1L3Q13609 305 aa11.37□□□□□ -0.59
RAB5C-204ENST00000547517 ZNF460Q14592 562 aa11.37□□□□□ -0.59
RAB5C-204ENST00000547517 ARHGAP19Q14CB8 494 aa11.37□□□□□ -0.59
RAB5C-204ENST00000547517 PTCHD3Q3KNS1 767 aa11.37□□□□□ -0.59
RAB5C-204ENST00000547517 FCRL6Q6DN72 434 aa11.37□□□□□ -0.59
RAB5C-204ENST00000547517 FAM199XQ6PEV8 388 aaPredicted RBP11.37□□□□□ -0.59
RAB5C-204ENST00000547517 FIGLAQ6QHK4 219 aa11.37□□□□□ -0.59
RAB5C-204ENST00000547517 MBOAT1Q6ZNC8 495 aa11.37□□□□□ -0.59
RAB5C-204ENST00000547517 MMGT1Q8N4V1 131 aa11.37□□□□□ -0.59
RAB5C-204ENST00000547517 DNAJC22Q8N4W6 341 aa11.37□□□□□ -0.59
RAB5C-204ENST00000547517 SLC38A9Q8NBW4 561 aa11.37□□□□□ -0.59
RAB5C-204ENST00000547517 FBXO15Q8NCQ5 510 aaPredicted RBP11.37□□□□□ -0.59
RAB5C-204ENST00000547517 OR2A1Q8NGT9 310 aa11.37□□□□□ -0.59
RAB5C-204ENST00000547517 ZNF480Q8WV37 535 aa11.37□□□□□ -0.59
RAB5C-204ENST00000547517 SMPDL3AQ92484 453 aa11.37□□□□□ -0.59
RAB5C-204ENST00000547517 TTC9Q92623 222 aa11.37□□□□□ -0.59
RAB5C-204ENST00000547517 DLG3Q92796 817 aa11.37□□□□□ -0.59
RAB5C-204ENST00000547517 VPS39Q96JC1 886 aa11.37□□□□□ -0.59
RAB5C-204ENST00000547517 BBC3Q96PG8 261 aaPredicted RBP11.37□□□□□ -0.59
RAB5C-204ENST00000547517 RUFY1Q96T51 708 aa11.37□□□□□ -0.59
RAB5C-204ENST00000547517 SLC12A9Q9BXP2 914 aa11.37□□□□□ -0.59
RAB5C-204ENST00000547517 CHRNA10Q9GZZ6 450 aa11.37□□□□□ -0.59
RAB5C-204ENST00000547517 SPRTNQ9H040 489 aaPredicted RBP11.37□□□□□ -0.59
RAB5C-204ENST00000547517 RHOJQ9H4E5 214 aa11.37□□□□□ -0.59
RAB5C-204ENST00000547517 AKIRIN1Q9H9L7 192 aaPredicted RBP11.37□□□□□ -0.59
RAB5C-204ENST00000547517 SLC6A20Q9NP91 592 aa11.37□□□□□ -0.59
RAB5C-204ENST00000547517 PCMTD2Q9NV79 361 aa11.37□□□□□ -0.59
RAB5C-204ENST00000547517 EURLQ9NYK6 297 aa11.37□□□□□ -0.59
RAB5C-204ENST00000547517 TXNDC16Q9P2K2 825 aa11.37□□□□□ -0.59
RAB5C-204ENST00000547517 TAC3Q9UHF0 121 aa11.37□□□□□ -0.59
RAB5C-204ENST00000547517 PLCL2Q9UPR0 1127 aa11.37□□□□□ -0.59
RAB5C-204ENST00000547517 VWA7Q9Y334 891 aa11.37□□□□□ -0.59
RAB5C-204ENST00000547517 PABPN1LA6NDY0 278 aaKnown RBP11.36□□□□□ -0.59
RAB5C-204ENST00000547517 TERTO14746 1132 aaKnown RBP11.36□□□□□ -0.59
RAB5C-204ENST00000547517 NKX2-8O15522 239 aa11.36□□□□□ -0.59
RAB5C-204ENST00000547517 TSPAN12O95859 305 aa11.36□□□□□ -0.59
RAB5C-204ENST00000547517 GSTA2P09210 222 aa11.36□□□□□ -0.59
RAB5C-204ENST00000547517 ZNF37AP17032 561 aaPredicted RBP11.36□□□□□ -0.59
RAB5C-204ENST00000547517 TCN2P20062 427 aa11.36□□□□□ -0.59
RAB5C-204ENST00000547517 IMPA1P29218 277 aa11.36□□□□□ -0.59
RAB5C-204ENST00000547517 STX2P32856 288 aa11.36□□□□□ -0.59
RAB5C-204ENST00000547517 RORAP35398 523 aa11.36□□□□□ -0.59
RAB5C-204ENST00000547517 HSD17B2P37059 387 aa11.36□□□□□ -0.59
RAB5C-204ENST00000547517 YBX1P67809 324 aaKnown RBP11.36□□□□□ -0.59
RAB5C-204ENST00000547517 CDC20Q12834 499 aa11.36□□□□□ -0.59
RAB5C-204ENST00000547517 PHKG1Q16816 387 aa11.36□□□□□ -0.59
RAB5C-204ENST00000547517 SOWAHCQ53LP3 525 aaPredicted RBP11.36□□□□□ -0.59
RAB5C-204ENST00000547517 ATP1A1-AS1Q5TC04 95 aa11.36□□□□□ -0.59
RAB5C-204ENST00000547517 THEMIS2Q5TEJ8 643 aa11.36□□□□□ -0.59
RAB5C-204ENST00000547517 C16orf46Q6P387 395 aa11.36□□□□□ -0.59
RAB5C-204ENST00000547517 C3orf62Q6ZUJ4 267 aa11.36□□□□□ -0.59
RAB5C-204ENST00000547517 CTAGE3PQ8IX95 158 aa11.36□□□□□ -0.59
RAB5C-204ENST00000547517 DSELQ8IZU8 1212 aa11.36□□□□□ -0.59
RAB5C-204ENST00000547517 ZNF655Q8N720 491 aaPredicted RBP11.36□□□□□ -0.59
RAB5C-204ENST00000547517 SEC14L1Q92503 715 aa11.36□□□□□ -0.59
RAB5C-204ENST00000547517 EXTL1Q92935 676 aa11.36□□□□□ -0.59
RAB5C-204ENST00000547517 CHST8Q9H2A9 424 aa11.36□□□□□ -0.59
RAB5C-204ENST00000547517 MRPS30Q9NP92 439 aaKnown RBP11.36□□□□□ -0.59
RAB5C-204ENST00000547517 ZDHHC18Q9NUE0 388 aa11.36□□□□□ -0.59
RAB5C-204ENST00000547517 STOX2Q9P2F5 926 aaPredicted RBP11.36□□□□□ -0.59
RAB5C-204ENST00000547517 PDE10AQ9Y233 779 aa11.36□□□□□ -0.59
RAB5C-204ENST00000547517 FAM159BA6NKW6 160 aa11.35□□□□□ -0.59
RAB5C-204ENST00000547517 C21orf140B9A014 251 aa11.35□□□□□ -0.59
RAB5C-204ENST00000547517 E7ENX8 843 aa11.35□□□□□ -0.59
RAB5C-204ENST00000547517 H3BMH7 237 aa11.35□□□□□ -0.59
RAB5C-204ENST00000547517 MEN1O00255 615 aa11.35□□□□□ -0.59
RAB5C-204ENST00000547517 ATXN7O15265 892 aaPredicted RBP11.35□□□□□ -0.59
RAB5C-204ENST00000547517 CTSVO60911 334 aa11.35□□□□□ -0.59
RAB5C-204ENST00000547517 CCNDBP1O95273 360 aa11.35□□□□□ -0.59
RAB5C-204ENST00000547517 KLK3P07288 261 aaPredicted RBP11.35□□□□□ -0.59
RAB5C-204ENST00000547517 GP5P40197 560 aa11.35□□□□□ -0.59
RAB5C-204ENST00000547517 SLC12A2P55011 1212 aa11.35□□□□□ -0.59
RAB5C-204ENST00000547517 TAS2R39P59534 338 aa11.35□□□□□ -0.59
RAB5C-204ENST00000547517 RPS18P62269 152 aaKnown RBP11.35□□□□□ -0.59
RAB5C-204ENST00000547517 TBPL1P62380 186 aa11.35□□□□□ -0.59
RAB5C-204ENST00000547517 TAP2Q03519 686 aa11.35□□□□□ -0.59
RAB5C-204ENST00000547517 NAA25Q14CX7 972 aa11.35□□□□□ -0.59
RAB5C-204ENST00000547517 EFTUD2Q15029 972 aaKnown RBP eCLIP11.35□□□□□ -0.592e-6■■■■■ 36.6
RAB5C-204ENST00000547517 ZC3H12BQ5HYM0 836 aaKnown RBP11.35□□□□□ -0.59
RAB5C-204ENST00000547517 C1orf189Q5VU69 101 aa11.35□□□□□ -0.59
RAB5C-204ENST00000547517 ICE2Q659A1 982 aa11.35□□□□□ -0.59
RAB5C-204ENST00000547517 LCN10Q6JVE6 187 aa11.35□□□□□ -0.59
RAB5C-204ENST00000547517 TLDC1Q6P9B6 456 aa11.35□□□□□ -0.59
RAB5C-204ENST00000547517 PCSK4Q6UW60 755 aa11.35□□□□□ -0.59
RAB5C-204ENST00000547517 FAM198BQ6UWH4 519 aa11.35□□□□□ -0.59
RAB5C-204ENST00000547517 TMEM207Q6UWW9 146 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms