RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 NKAIN1Q4KMZ8 207 aa11.38□□□□□ -0.59
GABPB1-206ENST00000543881 CTSL3PQ5NE16 218 aa11.38□□□□□ -0.59
GABPB1-206ENST00000543881 FCRL6Q6DN72 434 aa11.38□□□□□ -0.59
GABPB1-206ENST00000543881 PTRHD1Q6GMV3 140 aaKnown RBP11.38□□□□□ -0.59
GABPB1-206ENST00000543881 MRPL14Q6P1L8 145 aaKnown RBP11.38□□□□□ -0.59
GABPB1-206ENST00000543881 TLDC1Q6P9B6 456 aa11.38□□□□□ -0.59
GABPB1-206ENST00000543881 GSTA5Q7RTV2 222 aa11.38□□□□□ -0.59
GABPB1-206ENST00000543881 MCATQ8IVS2 390 aaKnown RBP11.38□□□□□ -0.59
GABPB1-206ENST00000543881 PRELID2Q8N945 189 aa11.38□□□□□ -0.59
GABPB1-206ENST00000543881 OR2L8Q8NGY9 312 aa11.38□□□□□ -0.59
GABPB1-206ENST00000543881 PROKR1Q8TCW9 393 aa11.38□□□□□ -0.59
GABPB1-206ENST00000543881 BIRC8Q96P09 236 aa11.38□□□□□ -0.59
GABPB1-206ENST00000543881 KIFC1Q9BW19 673 aa11.38□□□□□ -0.59
GABPB1-206ENST00000543881 RUBCNLQ9H714 662 aa11.38□□□□□ -0.59
GABPB1-206ENST00000543881 P4HTMQ9NXG6 502 aa11.38□□□□□ -0.59
GABPB1-206ENST00000543881 ZKSCAN5Q9Y2L8 839 aa11.38□□□□□ -0.59
GABPB1-206ENST00000543881 PTRH2Q9Y3E5 179 aaKnown RBP11.38□□□□□ -0.59
GABPB1-206ENST00000543881 PDZD2O15018 2839 aa11.37□□□□□ -0.59
GABPB1-206ENST00000543881 E2F3O00716 465 aa11.37□□□□□ -0.59
GABPB1-206ENST00000543881 CEP104O60308 925 aa11.37□□□□□ -0.59
GABPB1-206ENST00000543881 KDM1AO60341 852 aa11.37□□□□□ -0.59
GABPB1-206ENST00000543881 AVILO75366 819 aa11.37□□□□□ -0.59
GABPB1-206ENST00000543881 VAPBO95292 243 aa11.37□□□□□ -0.59
GABPB1-206ENST00000543881 C1orf105O95561 183 aa11.37□□□□□ -0.59
GABPB1-206ENST00000543881 RPN2P04844 631 aa11.37□□□□□ -0.59
GABPB1-206ENST00000543881 UMODP07911 640 aa11.37□□□□□ -0.59
GABPB1-206ENST00000543881 CCDC175P0C221 793 aa11.37□□□□□ -0.59
GABPB1-206ENST00000543881 TPSB2P20231 275 aa11.37□□□□□ -0.59
GABPB1-206ENST00000543881 RPS3P23396 243 aaKnown RBP eCLIP11.37□□□□□ -0.59
GABPB1-206ENST00000543881 ITGA3P26006 1051 aa11.37□□□□□ -0.59
GABPB1-206ENST00000543881 FOLR3P41439 243 aa11.37□□□□□ -0.59
GABPB1-206ENST00000543881 BDKRB1P46663 353 aa11.37□□□□□ -0.59
GABPB1-206ENST00000543881 TERF1P54274 439 aa11.37□□□□□ -0.59
GABPB1-206ENST00000543881 CCZ1BP86790 482 aa11.37□□□□□ -0.59
GABPB1-206ENST00000543881 CCZ1P86791 482 aaPredicted RBP11.37□□□□□ -0.59
GABPB1-206ENST00000543881 TRIP13Q15645 432 aaPredicted RBP11.37□□□□□ -0.59
GABPB1-206ENST00000543881 TPSAB1Q15661 275 aa11.37□□□□□ -0.59
GABPB1-206ENST00000543881 LRRC8BQ6P9F7 803 aa11.37□□□□□ -0.59
GABPB1-206ENST00000543881 C4orf22Q6V702 233 aa11.37□□□□□ -0.59
GABPB1-206ENST00000543881 MPP5Q8N3R9 675 aa11.37□□□□□ -0.59
GABPB1-206ENST00000543881 DENND1AQ8TEH3 1009 aa11.37□□□□□ -0.59
GABPB1-206ENST00000543881 LPGAT1Q92604 370 aa11.37□□□□□ -0.59
GABPB1-206ENST00000543881 WDR77Q9BQA1 342 aaPredicted RBP11.37□□□□□ -0.59
GABPB1-206ENST00000543881 C17orf62Q9BQA9 187 aa11.37□□□□□ -0.59
GABPB1-206ENST00000543881 TRIM56Q9BRZ2 755 aaKnown RBP11.37□□□□□ -0.59
GABPB1-206ENST00000543881 TXLNGQ9NUQ3 528 aa11.37□□□□□ -0.59
GABPB1-206ENST00000543881 BFARQ9NZS9 450 aa11.37□□□□□ -0.59
GABPB1-206ENST00000543881 IFT80Q9P2H3 777 aaPredicted RBP11.37□□□□□ -0.59
GABPB1-206ENST00000543881 GNPTGQ9UJJ9 305 aa11.37□□□□□ -0.59
GABPB1-206ENST00000543881 TTC7AQ9ULT0 858 aaPredicted RBP11.37□□□□□ -0.59
GABPB1-206ENST00000543881 CSAG2Q9Y5P2 127 aa11.37□□□□□ -0.59
GABPB1-206ENST00000543881 ADGRG4Q8IZF6 3080 aa11.37□□□□□ -0.59
GABPB1-206ENST00000543881 SVILO95425 2214 aa11.36□□□□□ -0.59
GABPB1-206ENST00000543881 NRP2O60462 931 aa11.36□□□□□ -0.59
GABPB1-206ENST00000543881 NDUFS3O75489 264 aa11.36□□□□□ -0.59
GABPB1-206ENST00000543881 S1PR4O95977 384 aa11.36□□□□□ -0.59
GABPB1-206ENST00000543881 EDN3P14138 238 aa11.36□□□□□ -0.59
GABPB1-206ENST00000543881 MCM3P25205 808 aa11.36□□□□□ -0.59
GABPB1-206ENST00000543881 PSMB5P28074 263 aa11.36□□□□□ -0.59
GABPB1-206ENST00000543881 FMO4P31512 558 aa11.36□□□□□ -0.59
GABPB1-206ENST00000543881 EIF3BP55884 814 aaKnown RBP11.36□□□□□ -0.59
GABPB1-206ENST00000543881 SOX8P57073 446 aa11.36□□□□□ -0.59
GABPB1-206ENST00000543881 YBX1P67809 324 aaKnown RBP11.36□□□□□ -0.59
GABPB1-206ENST00000543881 GBX1Q14549 363 aa11.36□□□□□ -0.59
GABPB1-206ENST00000543881 KCNJ11Q14654 390 aa11.36□□□□□ -0.59
GABPB1-206ENST00000543881 TMED2Q15363 201 aa11.36□□□□□ -0.59
GABPB1-206ENST00000543881 SF1Q15637 639 aaKnown RBP11.36□□□□□ -0.59
GABPB1-206ENST00000543881 HIF1AQ16665 826 aa11.36□□□□□ -0.59
GABPB1-206ENST00000543881 ZXDCQ2QGD7 858 aaPredicted RBP11.36□□□□□ -0.59
GABPB1-206ENST00000543881 TYSND1Q2T9J0 566 aa11.36□□□□□ -0.59
GABPB1-206ENST00000543881 TTC27Q6P3X3 843 aa11.36□□□□□ -0.59
GABPB1-206ENST00000543881 FIGLAQ6QHK4 219 aa11.36□□□□□ -0.59
GABPB1-206ENST00000543881 PPP1R32Q7Z5V6 425 aa11.36□□□□□ -0.59
GABPB1-206ENST00000543881 FJX1Q86VR8 437 aa11.36□□□□□ -0.59
GABPB1-206ENST00000543881 LRRC6Q86X45 466 aa11.36□□□□□ -0.59
GABPB1-206ENST00000543881 SPNS2Q8IVW8 549 aa11.36□□□□□ -0.59
GABPB1-206ENST00000543881 LRRC8AQ8IWT6 810 aa11.36□□□□□ -0.59
GABPB1-206ENST00000543881 DTWD1Q8N5C7 304 aa11.36□□□□□ -0.59
GABPB1-206ENST00000543881 TRIM58Q8NG06 486 aa11.36□□□□□ -0.59
GABPB1-206ENST00000543881 OR2Y1Q8NGV0 311 aa11.36□□□□□ -0.59
GABPB1-206ENST00000543881 GRHL3Q8TE85 626 aa11.36□□□□□ -0.59
GABPB1-206ENST00000543881 MAIP1Q8WWC4 291 aa11.36□□□□□ -0.59
GABPB1-206ENST00000543881 SLC22A18Q96BI1 424 aa11.36□□□□□ -0.59
GABPB1-206ENST00000543881 FAM136AQ96C01 138 aa11.36□□□□□ -0.59
GABPB1-206ENST00000543881 PANX3Q96QZ0 392 aa11.36□□□□□ -0.59
GABPB1-206ENST00000543881 NDC1Q9BTX1 674 aa11.36□□□□□ -0.59
GABPB1-206ENST00000543881 MRM3Q9HC36 420 aaKnown RBP11.36□□□□□ -0.59
GABPB1-206ENST00000543881 ATP13A2Q9NQ11 1180 aa11.36□□□□□ -0.59
GABPB1-206ENST00000543881 IRAK4Q9NWZ3 460 aa11.36□□□□□ -0.59
GABPB1-206ENST00000543881 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.36□□□□□ -0.59
GABPB1-206ENST00000543881 GALPQ9UBC7 116 aa11.36□□□□□ -0.59
GABPB1-206ENST00000543881 COPG2Q9UBF2 871 aa11.36□□□□□ -0.59
GABPB1-206ENST00000543881 NDOR1Q9UHB4 597 aa11.36□□□□□ -0.59
GABPB1-206ENST00000543881 GPN3Q9UHW5 284 aaPredicted RBP11.36□□□□□ -0.59
GABPB1-206ENST00000543881 TSR3Q9UJK0 312 aaKnown RBP11.36□□□□□ -0.59
GABPB1-206ENST00000543881 SLC39A10Q9ULF5 831 aa11.36□□□□□ -0.59
GABPB1-206ENST00000543881 SOX13Q9UN79 622 aa11.36□□□□□ -0.59
GABPB1-206ENST00000543881 NOVA2Q9UNW9 492 aaKnown RBP11.36□□□□□ -0.59
GABPB1-206ENST00000543881 ANKRD12Q6UB98 2062 aa11.35□□□□□ -0.59
GABPB1-206ENST00000543881 A0A1B0GUH1 482 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms