RNA–Protein interactions for RNA: ENST00000502393.5

SFXN1-203, Transcript of sideroflexin 1, humanhuman

TSL 2 BASIC

Gene SFXN1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-203ENST00000502393 GALNT16Q8N428 558 aa18.9■□□□□ 0.62
SFXN1-203ENST00000502393 RBMXL3Q8N7X1 1067 aaKnown RBP18.9■□□□□ 0.62
SFXN1-203ENST00000502393 TTC29Q8NA56 475 aaPredicted RBP18.9■□□□□ 0.62
SFXN1-203ENST00000502393 MCUQ8NE86 351 aa18.9■□□□□ 0.62
SFXN1-203ENST00000502393 OR2L3Q8NG85 312 aa18.9■□□□□ 0.62
SFXN1-203ENST00000502393 OR2A1Q8NGT9 310 aa18.9■□□□□ 0.62
SFXN1-203ENST00000502393 MAGOHBQ96A72 148 aaKnown RBP18.9■□□□□ 0.62
SFXN1-203ENST00000502393 PNPLA2Q96AD5 504 aa18.9■□□□□ 0.62
SFXN1-203ENST00000502393 MIPEPQ99797 713 aa18.9■□□□□ 0.62
SFXN1-203ENST00000502393 SLC26A1Q9H2B4 701 aa18.9■□□□□ 0.62
SFXN1-203ENST00000502393 SLAMF7Q9NQ25 335 aa18.9■□□□□ 0.62
SFXN1-203ENST00000502393 FAM237BA0A1B0GVD1 139 aa18.89■□□□□ 0.61
SFXN1-203ENST00000502393 A0A1W2PPV9 198 aa18.89■□□□□ 0.61
SFXN1-203ENST00000502393 SDR42E2A6NKP2 422 aa18.89■□□□□ 0.61
SFXN1-203ENST00000502393 E5RI56 91 aa18.89■□□□□ 0.61
SFXN1-203ENST00000502393 AGPSO00116 658 aa18.89■□□□□ 0.61
SFXN1-203ENST00000502393 CTSVO60911 334 aa18.89■□□□□ 0.61
SFXN1-203ENST00000502393 ALPPP05187 535 aa18.89■□□□□ 0.61
SFXN1-203ENST00000502393 PKMP14618 531 aaKnown RBP18.89■□□□□ 0.61
SFXN1-203ENST00000502393 MCM3P25205 808 aa18.89■□□□□ 0.61
SFXN1-203ENST00000502393 VARSP26640 1264 aaKnown RBP18.89■□□□□ 0.61
SFXN1-203ENST00000502393 PSMB5P28074 263 aa18.89■□□□□ 0.61
SFXN1-203ENST00000502393 SOX8P57073 446 aa18.89■□□□□ 0.61
SFXN1-203ENST00000502393 DHX34Q14147 1143 aaKnown RBP18.89■□□□□ 0.61
SFXN1-203ENST00000502393 MYBPC3Q14896 1274 aa18.89■□□□□ 0.61
SFXN1-203ENST00000502393 ANKRD20A4Q4UJ75 823 aa18.89■□□□□ 0.61
SFXN1-203ENST00000502393 SLC6A19Q695T7 634 aa18.89■□□□□ 0.61
SFXN1-203ENST00000502393 CENPUQ71F23 418 aa18.89■□□□□ 0.61
SFXN1-203ENST00000502393 OR9A1PQ8NGU1 263 aa18.89■□□□□ 0.61
SFXN1-203ENST00000502393 NAP1L3Q99457 506 aaPredicted RBP18.89■□□□□ 0.61
SFXN1-203ENST00000502393 MFRPQ9BY79 579 aa18.89■□□□□ 0.61
SFXN1-203ENST00000502393 XAB2Q9HCS7 855 aaKnown RBP18.89■□□□□ 0.61
SFXN1-203ENST00000502393 FAM169AQ9Y6X4 670 aa18.89■□□□□ 0.61
SFXN1-203ENST00000502393 NBASA2RRP1 2371 aa18.88■□□□□ 0.61
SFXN1-203ENST00000502393 KRT87PA6NCN2 255 aa18.88■□□□□ 0.61
SFXN1-203ENST00000502393 ERGP11308 486 aa18.88■□□□□ 0.61
SFXN1-203ENST00000502393 MMP11P24347 488 aa18.88■□□□□ 0.61
SFXN1-203ENST00000502393 FOXL2P58012 376 aa18.88■□□□□ 0.61
SFXN1-203ENST00000502393 VSX2P58304 361 aaPredicted RBP18.88■□□□□ 0.61
SFXN1-203ENST00000502393 INPP5JQ15735 1006 aaPredicted RBP18.88■□□□□ 0.61
SFXN1-203ENST00000502393 NKG7Q16617 165 aa18.88■□□□□ 0.61
SFXN1-203ENST00000502393 CYP1B1Q16678 543 aa18.88■□□□□ 0.61
SFXN1-203ENST00000502393 ACSBG2Q5FVE4 666 aa18.88■□□□□ 0.61
SFXN1-203ENST00000502393 WASHC2DQ5SRD0 308 aa18.88■□□□□ 0.61
SFXN1-203ENST00000502393 Q8NA96 180 aa18.88■□□□□ 0.61
SFXN1-203ENST00000502393 FAM136AQ96C01 138 aa18.88■□□□□ 0.61
SFXN1-203ENST00000502393 MS4A14Q96JA4 679 aa18.88■□□□□ 0.61
SFXN1-203ENST00000502393 ATP13A2Q9NQ11 1180 aa18.88■□□□□ 0.61
SFXN1-203ENST00000502393 FAM114A2Q9NRY5 505 aa18.88■□□□□ 0.61
SFXN1-203ENST00000502393 GALPQ9UBC7 116 aa18.88■□□□□ 0.61
SFXN1-203ENST00000502393 NXT1Q9UKK6 140 aaKnown RBP18.88■□□□□ 0.61
SFXN1-203ENST00000502393 CYSRT1A8MQ03 144 aa18.87■□□□□ 0.61
SFXN1-203ENST00000502393 PSIP1O75475 530 aaKnown RBP18.87■□□□□ 0.61
SFXN1-203ENST00000502393 IPO13O94829 963 aaKnown RBP18.87■□□□□ 0.61
SFXN1-203ENST00000502393 CMPK1P30085 196 aa18.87■□□□□ 0.61
SFXN1-203ENST00000502393 COILP38432 576 aaPredicted RBP18.87■□□□□ 0.61
SFXN1-203ENST00000502393 AIMP2Q13155 320 aaKnown RBP18.87■□□□□ 0.61
SFXN1-203ENST00000502393 THOC5Q13769 683 aaKnown RBP18.87■□□□□ 0.61
SFXN1-203ENST00000502393 FASTKQ14296 549 aaKnown RBP18.87■□□□□ 0.61
SFXN1-203ENST00000502393 ARHGAP19Q14CB8 494 aa18.87■□□□□ 0.61
SFXN1-203ENST00000502393 KLHL38Q2WGJ6 581 aa18.87■□□□□ 0.61
SFXN1-203ENST00000502393 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.87■□□□□ 0.61
SFXN1-203ENST00000502393 ZNF470Q6ECI4 717 aa18.87■□□□□ 0.61
SFXN1-203ENST00000502393 FRMPD2BQ6IN97 320 aa18.87■□□□□ 0.61
SFXN1-203ENST00000502393 CCDC137Q6PK04 289 aaKnown RBP18.87■□□□□ 0.61
SFXN1-203ENST00000502393 IGFL3Q6UXB1 125 aa18.87■□□□□ 0.61
SFXN1-203ENST00000502393 COX15Q7KZN9 410 aa18.87■□□□□ 0.61
SFXN1-203ENST00000502393 RNF44Q7L0R7 432 aa18.87■□□□□ 0.61
SFXN1-203ENST00000502393 SMPDL3AQ92484 453 aa18.87■□□□□ 0.61
SFXN1-203ENST00000502393 COL26A1Q96A83 441 aa18.87■□□□□ 0.61
SFXN1-203ENST00000502393 SERPINB12Q96P63 405 aa18.87■□□□□ 0.61
SFXN1-203ENST00000502393 SPSB2Q99619 263 aa18.87■□□□□ 0.61
SFXN1-203ENST00000502393 TRIM56Q9BRZ2 755 aaKnown RBP18.87■□□□□ 0.61
SFXN1-203ENST00000502393 ZNF552Q9H707 407 aaPredicted RBP18.87■□□□□ 0.61
SFXN1-203ENST00000502393 KLHL42Q9P2K6 505 aa18.87■□□□□ 0.61
SFXN1-203ENST00000502393 TSR3Q9UJK0 312 aaKnown RBP18.87■□□□□ 0.61
SFXN1-203ENST00000502393 NEU2Q9Y3R4 380 aa18.87■□□□□ 0.61
SFXN1-203ENST00000502393 A0A0J9YVX5 310 aa18.86■□□□□ 0.61
SFXN1-203ENST00000502393 HYKKA2RU49 373 aa18.86■□□□□ 0.61
SFXN1-203ENST00000502393 OR2A25A4D2G3 310 aa18.86■□□□□ 0.61
SFXN1-203ENST00000502393 CTAGE9A4FU28 777 aa18.86■□□□□ 0.61
SFXN1-203ENST00000502393 ARHGEF33A8MVX0 844 aa18.86■□□□□ 0.61
SFXN1-203ENST00000502393 MYO1CO00159 1063 aa18.86■□□□□ 0.61
SFXN1-203ENST00000502393 USP1O94782 785 aa18.86■□□□□ 0.61
SFXN1-203ENST00000502393 CATP04040 527 aaKnown RBP18.86■□□□□ 0.61
SFXN1-203ENST00000502393 GNLYP22749 145 aa18.86■□□□□ 0.61
SFXN1-203ENST00000502393 HSD17B2P37059 387 aa18.86■□□□□ 0.61
SFXN1-203ENST00000502393 UQCRFS1P47985 274 aa18.86■□□□□ 0.61
SFXN1-203ENST00000502393 CLCN7P51798 805 aa18.86■□□□□ 0.61
SFXN1-203ENST00000502393 TTLL9Q3SXZ7 439 aa18.86■□□□□ 0.61
SFXN1-203ENST00000502393 NEK10Q6ZWH5 1172 aa18.86■□□□□ 0.61
SFXN1-203ENST00000502393 TMEM151BQ8IW70 566 aa18.86■□□□□ 0.61
SFXN1-203ENST00000502393 ZDHHC19Q8WVZ1 309 aaPredicted RBP18.86■□□□□ 0.61
SFXN1-203ENST00000502393 TM9SF4Q92544 642 aa18.86■□□□□ 0.61
SFXN1-203ENST00000502393 ZNF669Q96BR6 464 aaPredicted RBP18.86■□□□□ 0.61
SFXN1-203ENST00000502393 ZFYVE21Q9BQ24 234 aa18.86■□□□□ 0.61
SFXN1-203ENST00000502393 ZC3H7BQ9UGR2 993 aaKnown RBP18.86■□□□□ 0.61
SFXN1-203ENST00000502393 CDC23Q9UJX2 597 aa18.86■□□□□ 0.61
SFXN1-203ENST00000502393 B3GNT3Q9Y2A9 372 aa18.86■□□□□ 0.61
SFXN1-203ENST00000502393 PTPN13Q12923 2485 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 128.5 ms