RNA–Protein interactions for RNA: ENST00000470171.5

FDPS-208, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-208ENST00000470171 MNS1Q8NEH6 495 aa14.85□□□□□ -0.03
FDPS-208ENST00000470171 OR2A1Q8NGT9 310 aa14.85□□□□□ -0.03
FDPS-208ENST00000470171 PYROXD1Q8WU10 500 aa14.85□□□□□ -0.03
FDPS-208ENST00000470171 ATL1Q8WXF7 558 aa14.85□□□□□ -0.03
FDPS-208ENST00000470171 EXTL1Q92935 676 aa14.85□□□□□ -0.03
FDPS-208ENST00000470171 VPS39Q96JC1 886 aa14.85□□□□□ -0.03
FDPS-208ENST00000470171 VPS50Q96JG6 964 aa14.85□□□□□ -0.03
FDPS-208ENST00000470171 ZNF285Q96NJ3 590 aa14.85□□□□□ -0.03
FDPS-208ENST00000470171 TRIM56Q9BRZ2 755 aaKnown RBP14.85□□□□□ -0.03
FDPS-208ENST00000470171 TSPYL1Q9H0U9 437 aa14.85□□□□□ -0.03
FDPS-208ENST00000470171 ACTL8Q9H568 366 aa14.85□□□□□ -0.03
FDPS-208ENST00000470171 PARVBQ9HBI1 364 aa14.85□□□□□ -0.03
FDPS-208ENST00000470171 FAM60AQ9NP50 221 aa14.85□□□□□ -0.03
FDPS-208ENST00000470171 GPN3Q9UHW5 284 aaPredicted RBP14.85□□□□□ -0.03
FDPS-208ENST00000470171 CDC23Q9UJX2 597 aa14.85□□□□□ -0.03
FDPS-208ENST00000470171 RALYQ9UKM9 306 aaKnown RBP14.85□□□□□ -0.03
FDPS-208ENST00000470171 MED16Q9Y2X0 877 aa14.85□□□□□ -0.03
FDPS-208ENST00000470171 SNX24Q9Y343 169 aa14.85□□□□□ -0.03
FDPS-208ENST00000470171 FITM1A5D6W6 292 aa14.84□□□□□ -0.03
FDPS-208ENST00000470171 GRIA3P42263 894 aa14.84□□□□□ -0.03
FDPS-208ENST00000470171 RPL21P46778 160 aaKnown RBP14.84□□□□□ -0.03
FDPS-208ENST00000470171 MPP1Q00013 466 aa14.84□□□□□ -0.03
FDPS-208ENST00000470171 PDAP1Q13442 181 aaKnown RBP14.84□□□□□ -0.03
FDPS-208ENST00000470171 ZIC1Q15915 447 aa14.84□□□□□ -0.03
FDPS-208ENST00000470171 DUPD1Q68J44 220 aa14.84□□□□□ -0.03
FDPS-208ENST00000470171 UBE2R2Q712K3 238 aaPredicted RBP14.84□□□□□ -0.03
FDPS-208ENST00000470171 NKAPQ8N5F7 415 aaKnown RBP14.84□□□□□ -0.03
FDPS-208ENST00000470171 FBXO36Q8NEA4 188 aa14.84□□□□□ -0.03
FDPS-208ENST00000470171 FKBP10Q96AY3 582 aa14.84□□□□□ -0.03
FDPS-208ENST00000470171 TRIM51Q9BSJ1 452 aa14.84□□□□□ -0.03
FDPS-208ENST00000470171 SLC25A18Q9H1K4 315 aa14.84□□□□□ -0.03
FDPS-208ENST00000470171 CHST8Q9H2A9 424 aa14.84□□□□□ -0.03
FDPS-208ENST00000470171 POPDC3Q9HBV1 291 aa14.84□□□□□ -0.03
FDPS-208ENST00000470171 MRPS30Q9NP92 439 aaKnown RBP14.84□□□□□ -0.03
FDPS-208ENST00000470171 IRAK4Q9NWZ3 460 aa14.84□□□□□ -0.03
FDPS-208ENST00000470171 NXT1Q9UKK6 140 aaKnown RBP14.84□□□□□ -0.03
FDPS-208ENST00000470171 G3BP2Q9UN86 482 aaKnown RBP14.84□□□□□ -0.03
FDPS-208ENST00000470171 NOVA2Q9UNW9 492 aaKnown RBP14.84□□□□□ -0.03
FDPS-208ENST00000470171 CHMP2BQ9UQN3 213 aa14.84□□□□□ -0.03
FDPS-208ENST00000470171 CACNA1GO43497 2377 aa14.84□□□□□ -0.03
FDPS-208ENST00000470171 B8ZZF3 427 aa14.83□□□□□ -0.04
FDPS-208ENST00000470171 E7ENX8 843 aa14.83□□□□□ -0.04
FDPS-208ENST00000470171 MKRN2OSH3BPM6 223 aa14.83□□□□□ -0.04
FDPS-208ENST00000470171 TP73O15350 636 aa14.83□□□□□ -0.04
FDPS-208ENST00000470171 PRPF4O43172 522 aaKnown RBP eCLIP14.83□□□□□ -0.045e-9■■□□□ 11.4
FDPS-208ENST00000470171 SLC16A8O95907 504 aa14.83□□□□□ -0.04
FDPS-208ENST00000470171 EZRP15311 586 aaKnown RBP14.83□□□□□ -0.04
FDPS-208ENST00000470171 ITGAXP20702 1163 aa14.83□□□□□ -0.04
FDPS-208ENST00000470171 F8A1P23610 371 aa14.83□□□□□ -0.04
FDPS-208ENST00000470171 BDKRB1P46663 353 aa14.83□□□□□ -0.04
FDPS-208ENST00000470171 RRADP55042 308 aa14.83□□□□□ -0.04
FDPS-208ENST00000470171 POLE2P56282 527 aa14.83□□□□□ -0.04
FDPS-208ENST00000470171 TAP2Q03519 686 aa14.83□□□□□ -0.04
FDPS-208ENST00000470171 KCNAB2Q13303 367 aa14.83□□□□□ -0.04
FDPS-208ENST00000470171 NCF4Q15080 339 aa14.83□□□□□ -0.04
FDPS-208ENST00000470171 PRMT9Q6P2P2 845 aa14.83□□□□□ -0.04
FDPS-208ENST00000470171 C16orf46Q6P387 395 aa14.83□□□□□ -0.04
FDPS-208ENST00000470171 TRIM73Q86UV7 250 aa14.83□□□□□ -0.04
FDPS-208ENST00000470171 RAB43Q86YS6 212 aa14.83□□□□□ -0.04
FDPS-208ENST00000470171 HPS6Q86YV9 775 aa14.83□□□□□ -0.04
FDPS-208ENST00000470171 IGDCC3Q8IVU1 814 aa14.83□□□□□ -0.04
FDPS-208ENST00000470171 ZBED8Q8IZ13 594 aa14.83□□□□□ -0.04
FDPS-208ENST00000470171 ZNF843Q8N446 348 aa14.83□□□□□ -0.04
FDPS-208ENST00000470171 SLC38A9Q8NBW4 561 aa14.83□□□□□ -0.04
FDPS-208ENST00000470171 THAP11Q96EK4 314 aa14.83□□□□□ -0.04
FDPS-208ENST00000470171 MVB12AQ96EY5 273 aa14.83□□□□□ -0.04
FDPS-208ENST00000470171 CFAP36Q96G28 342 aa14.83□□□□□ -0.04
FDPS-208ENST00000470171 IL17FQ96PD4 163 aa14.83□□□□□ -0.04
FDPS-208ENST00000470171 PKP4Q99569 1192 aa14.83□□□□□ -0.04
FDPS-208ENST00000470171 SELENOSQ9BQE4 189 aa14.83□□□□□ -0.04
FDPS-208ENST00000470171 TRIM31Q9BZY9 425 aa14.83□□□□□ -0.04
FDPS-208ENST00000470171 KLHL25Q9H0H3 589 aa14.83□□□□□ -0.04
FDPS-208ENST00000470171 STARD5Q9NSY2 213 aa14.83□□□□□ -0.04
FDPS-208ENST00000470171 TXNDC16Q9P2K2 825 aa14.83□□□□□ -0.04
FDPS-208ENST00000470171 GALPQ9UBC7 116 aa14.83□□□□□ -0.04
FDPS-208ENST00000470171 NDOR1Q9UHB4 597 aa14.83□□□□□ -0.04
FDPS-208ENST00000470171 TCFL5Q9UL49 500 aa14.83□□□□□ -0.04
FDPS-208ENST00000470171 CDC14AQ9UNH5 594 aa14.83□□□□□ -0.04
FDPS-208ENST00000470171 PCDHGB7Q9Y5F8 929 aa14.83□□□□□ -0.04
FDPS-208ENST00000470171 KCNMB2Q9Y691 235 aa14.83□□□□□ -0.04
FDPS-208ENST00000470171 KIF26BQ2KJY2 2108 aa14.83□□□□□ -0.04
FDPS-208ENST00000470171 A0A1B0GX78 115 aa14.82□□□□□ -0.04
FDPS-208ENST00000470171 OR2A25A4D2G3 310 aa14.82□□□□□ -0.04
FDPS-208ENST00000470171 FANCGO15287 622 aa14.82□□□□□ -0.04
FDPS-208ENST00000470171 RAD51CO43502 376 aa14.82□□□□□ -0.04
FDPS-208ENST00000470171 PRKAR1AP10644 381 aa14.82□□□□□ -0.04
FDPS-208ENST00000470171 MCM3P25205 808 aa14.82□□□□□ -0.04
FDPS-208ENST00000470171 GABRB3P28472 473 aa14.82□□□□□ -0.04
FDPS-208ENST00000470171 PMS2P54278 862 aa14.82□□□□□ -0.04
FDPS-208ENST00000470171 CYP4F2P78329 520 aa14.82□□□□□ -0.04
FDPS-208ENST00000470171 ERV3-1Q14264 604 aa14.82□□□□□ -0.04
FDPS-208ENST00000470171 SSPNQ14714 243 aa14.82□□□□□ -0.04
FDPS-208ENST00000470171 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.82□□□□□ -0.04
FDPS-208ENST00000470171 HECTD2Q5U5R9 776 aa14.82□□□□□ -0.04
FDPS-208ENST00000470171 GARNL3Q5VVW2 1013 aa14.82□□□□□ -0.04
FDPS-208ENST00000470171 ICE2Q659A1 982 aa14.82□□□□□ -0.04
FDPS-208ENST00000470171 ZNF385CQ66K41 422 aaPredicted RBP14.82□□□□□ -0.04
FDPS-208ENST00000470171 FCRL6Q6DN72 434 aa14.82□□□□□ -0.04
FDPS-208ENST00000470171 MED25Q71SY5 747 aa14.82□□□□□ -0.04
FDPS-208ENST00000470171 RNF44Q7L0R7 432 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms