RNA–Protein interactions for RNA: ENST00000333007.5

TNFAIP2-201, Transcript of TNF alpha induced protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP2, Length 4,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-201ENST00000333007 TMEM245Q9H330 911 aa17.72■□□□□ 0.43
TNFAIP2-201ENST00000333007 HCSTQ9UBK5 93 aa17.72■□□□□ 0.43
TNFAIP2-201ENST00000333007 KIAA0100Q14667 2235 aaKnown RBP17.72■□□□□ 0.43
TNFAIP2-201ENST00000333007 H3BM21 787 aa17.72■□□□□ 0.43
TNFAIP2-201ENST00000333007 GBAP04062 536 aa17.72■□□□□ 0.43
TNFAIP2-201ENST00000333007 GGT1P19440 569 aa17.72■□□□□ 0.43
TNFAIP2-201ENST00000333007 PON2Q15165 354 aa17.72■□□□□ 0.43
TNFAIP2-201ENST00000333007 DEF8Q6ZN54 512 aa17.72■□□□□ 0.43
TNFAIP2-201ENST00000333007 NXPE1Q8N323 547 aa17.72■□□□□ 0.43
TNFAIP2-201ENST00000333007 VANGL1Q8TAA9 524 aaPredicted RBP17.72■□□□□ 0.43
TNFAIP2-201ENST00000333007 SLCO4A1Q96BD0 722 aa17.72■□□□□ 0.43
TNFAIP2-201ENST00000333007 OMA1Q96E52 524 aa17.72■□□□□ 0.43
TNFAIP2-201ENST00000333007 COQ7Q99807 217 aa17.72■□□□□ 0.43
TNFAIP2-201ENST00000333007 MAGEE1Q9HCI5 957 aa17.72■□□□□ 0.43
TNFAIP2-201ENST00000333007 VPS29Q9UBQ0 182 aa17.72■□□□□ 0.43
TNFAIP2-201ENST00000333007 RGS17Q9UGC6 210 aaPredicted RBP17.72■□□□□ 0.43
TNFAIP2-201ENST00000333007 ANGPT4Q9Y264 503 aa17.72■□□□□ 0.43
TNFAIP2-201ENST00000333007 RUVBL1Q9Y265 456 aaKnown RBP17.72■□□□□ 0.43
TNFAIP2-201ENST00000333007 ZNF840PA6NDX5 716 aa17.71■□□□□ 0.43
TNFAIP2-201ENST00000333007 TNFRSF10BO14763 440 aa17.71■□□□□ 0.43
TNFAIP2-201ENST00000333007 CCNDBP1O95273 360 aa17.71■□□□□ 0.43
TNFAIP2-201ENST00000333007 C8GP07360 202 aa17.71■□□□□ 0.43
TNFAIP2-201ENST00000333007 HOXD8P13378 290 aaPredicted RBP17.71■□□□□ 0.43
TNFAIP2-201ENST00000333007 MTHFD2P13995 350 aa17.71■□□□□ 0.43
TNFAIP2-201ENST00000333007 DNAJA1P31689 397 aaKnown RBP17.71■□□□□ 0.43
TNFAIP2-201ENST00000333007 ZNF140P52738 457 aaPredicted RBP17.71■□□□□ 0.43
TNFAIP2-201ENST00000333007 TMBIM6P55061 237 aa17.71■□□□□ 0.43
TNFAIP2-201ENST00000333007 SCML4Q8N228 414 aa17.71■□□□□ 0.43
TNFAIP2-201ENST00000333007 FAR1Q8WVX9 515 aa17.71■□□□□ 0.43
TNFAIP2-201ENST00000333007 ACDQ96AP0 544 aa17.71■□□□□ 0.43
TNFAIP2-201ENST00000333007 HTATIP2Q9BUP3 242 aa17.71■□□□□ 0.43
TNFAIP2-201ENST00000333007 FUNDC2Q9BWH2 189 aa17.71■□□□□ 0.43
TNFAIP2-201ENST00000333007 CAPN10Q9HC96 672 aa17.71■□□□□ 0.43
TNFAIP2-201ENST00000333007 ENOPH1Q9UHY7 261 aa17.71■□□□□ 0.43
TNFAIP2-201ENST00000333007 ASF1AQ9Y294 204 aa17.71■□□□□ 0.43
TNFAIP2-201ENST00000333007 ZNF451Q9Y4E5 1061 aa17.71■□□□□ 0.43
TNFAIP2-201ENST00000333007 AGXTP21549 392 aa17.71■□□□□ 0.43
TNFAIP2-201ENST00000333007 RFX3P48380 749 aa17.71■□□□□ 0.43
TNFAIP2-201ENST00000333007 CLCN4P51793 760 aa17.71■□□□□ 0.43
TNFAIP2-201ENST00000333007 SLC34A3Q8N130 599 aa17.71■□□□□ 0.43
TNFAIP2-201ENST00000333007 C1orf52Q8N6N3 182 aaKnown RBP17.71■□□□□ 0.43
TNFAIP2-201ENST00000333007 OR2AP1Q8NGE2 309 aa17.71■□□□□ 0.43
TNFAIP2-201ENST00000333007 HSH2DQ96JZ2 352 aa17.71■□□□□ 0.43
TNFAIP2-201ENST00000333007 SUV39H2Q9H5I1 410 aa17.71■□□□□ 0.43
TNFAIP2-201ENST00000333007 ERVK-18Q9QC07 812 aa17.71■□□□□ 0.43
TNFAIP2-201ENST00000333007 FZD4Q9ULV1 537 aa17.71■□□□□ 0.43
TNFAIP2-201ENST00000333007 PDYNP01213 254 aa17.71■□□□□ 0.43
TNFAIP2-201ENST00000333007 GALTP07902 379 aa17.71■□□□□ 0.43
TNFAIP2-201ENST00000333007 IL12AP29459 219 aa17.71■□□□□ 0.43
TNFAIP2-201ENST00000333007 HNF1BP35680 557 aa17.71■□□□□ 0.43
TNFAIP2-201ENST00000333007 DEFB115Q30KQ5 88 aa17.71■□□□□ 0.43
TNFAIP2-201ENST00000333007 ZNF641Q96N77 438 aaPredicted RBP17.71■□□□□ 0.43
TNFAIP2-201ENST00000333007 WRAP53Q9BUR4 548 aaKnown RBP17.71■□□□□ 0.43
TNFAIP2-201ENST00000333007 AASSQ9UDR5 926 aa17.71■□□□□ 0.43
TNFAIP2-201ENST00000333007 MICAL3Q7RTP6 2002 aa17.71■□□□□ 0.42
TNFAIP2-201ENST00000333007 PSMD11O00231 422 aa17.7■□□□□ 0.42
TNFAIP2-201ENST00000333007 CA12O43570 354 aa17.7■□□□□ 0.42
TNFAIP2-201ENST00000333007 GPR1P46091 355 aa17.7■□□□□ 0.42
TNFAIP2-201ENST00000333007 ASMTP46597 345 aa17.7■□□□□ 0.42
TNFAIP2-201ENST00000333007 TMEM236Q5W0B7 351 aa17.7■□□□□ 0.42
TNFAIP2-201ENST00000333007 SLC15A4Q8N697 577 aa17.7■□□□□ 0.42
TNFAIP2-201ENST00000333007 WDR36Q8NI36 951 aaKnown RBP17.7■□□□□ 0.42
TNFAIP2-201ENST00000333007 NACC2Q96BF6 587 aa17.7■□□□□ 0.42
TNFAIP2-201ENST00000333007 POLE4Q9NR33 117 aa17.7■□□□□ 0.42
TNFAIP2-201ENST00000333007 ERGIC3Q9Y282 383 aa17.7■□□□□ 0.42
TNFAIP2-201ENST00000333007 UNCXA6NJT0 531 aa17.7■□□□□ 0.42
TNFAIP2-201ENST00000333007 SLC22A1O15245 554 aa17.7■□□□□ 0.42
TNFAIP2-201ENST00000333007 IDH3BO43837 385 aa17.7■□□□□ 0.42
TNFAIP2-201ENST00000333007 INMTO95050 263 aa17.7■□□□□ 0.42
TNFAIP2-201ENST00000333007 HOXB6P17509 224 aaKnown RBP17.7■□□□□ 0.42
TNFAIP2-201ENST00000333007 HOXC13P31276 330 aa17.7■□□□□ 0.42
TNFAIP2-201ENST00000333007 HMGCLP35914 325 aa17.7■□□□□ 0.42
TNFAIP2-201ENST00000333007 TCEA2Q15560 299 aa17.7■□□□□ 0.42
TNFAIP2-201ENST00000333007 CYP2A13Q16696 494 aa17.7■□□□□ 0.42
TNFAIP2-201ENST00000333007 COLEC12Q5KU26 742 aa17.7■□□□□ 0.42
TNFAIP2-201ENST00000333007 DPH2Q9BQC3 489 aaPredicted RBP17.7■□□□□ 0.42
TNFAIP2-201ENST00000333007 HNRNPCL2B2RXH8 293 aa17.7■□□□□ 0.42
TNFAIP2-201ENST00000333007 ALOX5P09917 674 aa17.7■□□□□ 0.42
TNFAIP2-201ENST00000333007 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.7■□□□□ 0.42
TNFAIP2-201ENST00000333007 TUBA3CQ13748 450 aa17.7■□□□□ 0.42
TNFAIP2-201ENST00000333007 CHST9Q7L1S5 443 aa17.7■□□□□ 0.42
TNFAIP2-201ENST00000333007 PIWIL3Q7Z3Z3 882 aaKnown RBP17.7■□□□□ 0.42
TNFAIP2-201ENST00000333007 CFAP206Q8IYR0 622 aa17.7■□□□□ 0.42
TNFAIP2-201ENST00000333007 CLIP4Q8N3C7 705 aa17.7■□□□□ 0.42
TNFAIP2-201ENST00000333007 OR2T11Q8NH01 316 aa17.7■□□□□ 0.42
TNFAIP2-201ENST00000333007 OR5AK3PQ8NH89 298 aa17.7■□□□□ 0.42
TNFAIP2-201ENST00000333007 AP2M1Q96CW1 435 aa17.7■□□□□ 0.42
TNFAIP2-201ENST00000333007 TPT1P8Q9HAU6 139 aa17.7■□□□□ 0.42
TNFAIP2-201ENST00000333007 TMEM39AQ9NV64 488 aa17.7■□□□□ 0.42
TNFAIP2-201ENST00000333007 THUMPD1Q9NXG2 353 aaKnown RBP17.7■□□□□ 0.42
TNFAIP2-201ENST00000333007 PCDH8O95206 1070 aa17.69■□□□□ 0.42
TNFAIP2-201ENST00000333007 POP4O95707 220 aaKnown RBP17.69■□□□□ 0.42
TNFAIP2-201ENST00000333007 ADAM17P78536 824 aa17.69■□□□□ 0.42
TNFAIP2-201ENST00000333007 GANABQ14697 944 aaKnown RBP17.69■□□□□ 0.42
TNFAIP2-201ENST00000333007 PDZK1Q5T2W1 519 aa17.69■□□□□ 0.42
TNFAIP2-201ENST00000333007 NADSYN1Q6IA69 706 aa17.69■□□□□ 0.42
TNFAIP2-201ENST00000333007 CAPN13Q6MZZ7 669 aaPredicted RBP17.69■□□□□ 0.42
TNFAIP2-201ENST00000333007 Q6ZVU0 165 aa17.69■□□□□ 0.42
TNFAIP2-201ENST00000333007 CD99L2Q8TCZ2 262 aa17.69■□□□□ 0.42
TNFAIP2-201ENST00000333007 CITED4Q96RK1 184 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms