RNA–Protein interactions for RNA: ENST00000234256.3

SLC1A4-201, Transcript of solute carrier family 1 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC1A4, Length 4,561 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A4-201ENST00000234256 C12orf66Q96MD2 445 aa16.73■□□□□ 0.27
SLC1A4-201ENST00000234256 PTPRZ1P23471 2315 aaPredicted RBP16.73■□□□□ 0.27
SLC1A4-201ENST00000234256 HOXB6P17509 224 aaKnown RBP16.73■□□□□ 0.27
SLC1A4-201ENST00000234256 GLDCP23378 1020 aa16.73■□□□□ 0.27
SLC1A4-201ENST00000234256 SUSD1Q6UWL2 747 aa16.73■□□□□ 0.27
SLC1A4-201ENST00000234256 ZSCAN32Q9NX65 697 aa16.73■□□□□ 0.27
SLC1A4-201ENST00000234256 GABRQQ9UN88 632 aa16.73■□□□□ 0.27
SLC1A4-201ENST00000234256 WNT6Q9Y6F9 365 aa16.73■□□□□ 0.27
SLC1A4-201ENST00000234256 WNT9AO14904 365 aa16.73■□□□□ 0.27
SLC1A4-201ENST00000234256 RASGRP1O95267 797 aa16.73■□□□□ 0.27
SLC1A4-201ENST00000234256 EPOP01588 193 aa16.73■□□□□ 0.27
SLC1A4-201ENST00000234256 ACP5P13686 325 aa16.73■□□□□ 0.27
SLC1A4-201ENST00000234256 CXXC5Q7LFL8 322 aaKnown RBP16.73■□□□□ 0.27
SLC1A4-201ENST00000234256 AMZ2Q86W34 360 aa16.73■□□□□ 0.27
SLC1A4-201ENST00000234256 ZNF461Q8TAF7 563 aa16.73■□□□□ 0.27
SLC1A4-201ENST00000234256 LCN9Q8WX39 176 aa16.73■□□□□ 0.27
SLC1A4-201ENST00000234256 UTP4Q969X6 686 aaKnown RBP16.73■□□□□ 0.27
SLC1A4-201ENST00000234256 TAMM41Q96BW9 452 aa16.73■□□□□ 0.27
SLC1A4-201ENST00000234256 TOR3AQ9H497 397 aa16.73■□□□□ 0.27
SLC1A4-201ENST00000234256 TPT1P8Q9HAU6 139 aa16.73■□□□□ 0.27
SLC1A4-201ENST00000234256 FLRT1Q9NZU1 646 aa16.73■□□□□ 0.27
SLC1A4-201ENST00000234256 PKD1L3Q7Z443 1732 aa16.73■□□□□ 0.27
SLC1A4-201ENST00000234256 XPNPEP2O43895 674 aa16.72■□□□□ 0.27
SLC1A4-201ENST00000234256 NFATC1O95644 943 aa16.72■□□□□ 0.27
SLC1A4-201ENST00000234256 DPY19L1Q2PZI1 675 aa16.72■□□□□ 0.27
SLC1A4-201ENST00000234256 C2orf27AQ580R0 203 aa16.72■□□□□ 0.27
SLC1A4-201ENST00000234256 COLEC12Q5KU26 742 aa16.72■□□□□ 0.27
SLC1A4-201ENST00000234256 CLEC12AQ5QGZ9 265 aa16.72■□□□□ 0.27
SLC1A4-201ENST00000234256 PSAPL1Q6NUJ1 521 aa16.72■□□□□ 0.27
SLC1A4-201ENST00000234256 LRRTM3Q86VH5 581 aa16.72■□□□□ 0.27
SLC1A4-201ENST00000234256 MMAAQ8IVH4 418 aaKnown RBP16.72■□□□□ 0.27
SLC1A4-201ENST00000234256 TTC9BQ8N6N2 239 aa16.72■□□□□ 0.27
SLC1A4-201ENST00000234256 AP3S1Q92572 193 aa16.72■□□□□ 0.27
SLC1A4-201ENST00000234256 KCNJ9Q92806 393 aa16.72■□□□□ 0.27
SLC1A4-201ENST00000234256 PSKH2Q96QS6 385 aa16.72■□□□□ 0.27
SLC1A4-201ENST00000234256 TTLL2Q9BWV7 592 aa16.72■□□□□ 0.27
SLC1A4-201ENST00000234256 RPRD1BQ9NQG5 326 aaKnown RBP16.72■□□□□ 0.27
SLC1A4-201ENST00000234256 FAM86C2PA6NEL3 165 aa16.72■□□□□ 0.27
SLC1A4-201ENST00000234256 PRORSD1PA6NEY8 169 aa16.72■□□□□ 0.27
SLC1A4-201ENST00000234256 MANBAO00462 879 aa16.72■□□□□ 0.27
SLC1A4-201ENST00000234256 PAPSS2O95340 614 aaPredicted RBP16.72■□□□□ 0.27
SLC1A4-201ENST00000234256 ITGB1P05556 798 aa16.72■□□□□ 0.27
SLC1A4-201ENST00000234256 LEPRP48357 1165 aaKnown RBP16.72■□□□□ 0.27
SLC1A4-201ENST00000234256 TIGD6Q17RP2 521 aa16.72■□□□□ 0.27
SLC1A4-201ENST00000234256 GPRC6AQ5T6X5 926 aa16.72■□□□□ 0.27
SLC1A4-201ENST00000234256 MBOAT1Q6ZNC8 495 aa16.72■□□□□ 0.27
SLC1A4-201ENST00000234256 GALNT13Q8IUC8 556 aa16.72■□□□□ 0.27
SLC1A4-201ENST00000234256 RPF2Q9H7B2 306 aaKnown RBP16.72■□□□□ 0.27
SLC1A4-201ENST00000234256 B4GALT6Q9UBX8 382 aa16.72■□□□□ 0.27
SLC1A4-201ENST00000234256 GNB5O14775 395 aa16.72■□□□□ 0.27
SLC1A4-201ENST00000234256 GPR32O75388 356 aa16.72■□□□□ 0.27
SLC1A4-201ENST00000234256 CD68P34810 354 aaPredicted RBP16.72■□□□□ 0.27
SLC1A4-201ENST00000234256 UAP1L1Q3KQV9 507 aa16.72■□□□□ 0.27
SLC1A4-201ENST00000234256 CYP27C1Q4G0S4 372 aa16.72■□□□□ 0.27
SLC1A4-201ENST00000234256 CRTC2Q53ET0 693 aaPredicted RBP16.72■□□□□ 0.27
SLC1A4-201ENST00000234256 TPRG1Q6ZUI0 275 aa16.72■□□□□ 0.27
SLC1A4-201ENST00000234256 SLC35A5Q9BS91 424 aa16.72■□□□□ 0.27
SLC1A4-201ENST00000234256 PRDM8Q9NQV8 689 aa16.72■□□□□ 0.27
SLC1A4-201ENST00000234256 IKZF2Q9UKS7 526 aa16.72■□□□□ 0.27
SLC1A4-201ENST00000234256 DNAJC15Q9Y5T4 150 aa16.72■□□□□ 0.27
SLC1A4-201ENST00000234256 CARNS1A5YM72 827 aa16.72■□□□□ 0.27
SLC1A4-201ENST00000234256 VIPP01282 170 aa16.72■□□□□ 0.27
SLC1A4-201ENST00000234256 ALOX5P09917 674 aa16.72■□□□□ 0.27
SLC1A4-201ENST00000234256 BDKRB1P46663 353 aa16.72■□□□□ 0.27
SLC1A4-201ENST00000234256 ARSFP54793 590 aa16.72■□□□□ 0.27
SLC1A4-201ENST00000234256 TOMM20Q15388 145 aa16.72■□□□□ 0.27
SLC1A4-201ENST00000234256 UMODL1-AS1Q8N2C9 162 aa16.72■□□□□ 0.27
SLC1A4-201ENST00000234256 C2orf15Q8WU43 125 aaKnown RBP16.72■□□□□ 0.27
SLC1A4-201ENST00000234256 ACTL7AQ9Y615 435 aa16.72■□□□□ 0.27
SLC1A4-201ENST00000234256 CD247P20963 164 aa16.71■□□□□ 0.27
SLC1A4-201ENST00000234256 STK19P49842 368 aaPredicted RBP16.71■□□□□ 0.27
SLC1A4-201ENST00000234256 MS4A2Q01362 244 aa16.71■□□□□ 0.27
SLC1A4-201ENST00000234256 KCNAB2Q13303 367 aa16.71■□□□□ 0.27
SLC1A4-201ENST00000234256 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.71■□□□□ 0.27
SLC1A4-201ENST00000234256 AGTRAPQ6RW13 159 aa16.71■□□□□ 0.27
SLC1A4-201ENST00000234256 SYVN1Q86TM6 617 aa16.71■□□□□ 0.27
SLC1A4-201ENST00000234256 LRRC17Q8N6Y2 441 aa16.71■□□□□ 0.27
SLC1A4-201ENST00000234256 COMMD3Q9UBI1 195 aa16.71■□□□□ 0.27
SLC1A4-201ENST00000234256 PMF1-BGLAPU3KQ54 211 aa16.71■□□□□ 0.27
SLC1A4-201ENST00000234256 LOC100130705A0A1B0GUX0 176 aa16.71■□□□□ 0.27
SLC1A4-201ENST00000234256 SLC30A4O14863 429 aa16.71■□□□□ 0.27
SLC1A4-201ENST00000234256 SNNO75324 88 aaPredicted RBP16.71■□□□□ 0.27
SLC1A4-201ENST00000234256 CD1DP15813 335 aa16.71■□□□□ 0.27
SLC1A4-201ENST00000234256 ELK4P28324 431 aa16.71■□□□□ 0.27
SLC1A4-201ENST00000234256 MEF2AQ02078 507 aaPredicted RBP16.71■□□□□ 0.27
SLC1A4-201ENST00000234256 ZNF282Q9UDV7 671 aaPredicted RBP16.71■□□□□ 0.27
SLC1A4-201ENST00000234256 MYADML2A6NDP7 307 aa16.71■□□□□ 0.27
SLC1A4-201ENST00000234256 K7ERQ8 282 aa16.71■□□□□ 0.27
SLC1A4-201ENST00000234256 COCHO43405 550 aa16.71■□□□□ 0.27
SLC1A4-201ENST00000234256 FAM189A1O60320 539 aa16.71■□□□□ 0.27
SLC1A4-201ENST00000234256 DNAJB13P59910 316 aa16.71■□□□□ 0.27
SLC1A4-201ENST00000234256 EMX2Q04743 252 aa16.71■□□□□ 0.27
SLC1A4-201ENST00000234256 SCARB2Q14108 478 aa16.71■□□□□ 0.27
SLC1A4-201ENST00000234256 VITQ6UXI7 678 aa16.71■□□□□ 0.27
SLC1A4-201ENST00000234256 PRSS58Q8IYP2 241 aa16.71■□□□□ 0.27
SLC1A4-201ENST00000234256 GHDCQ8N2G8 530 aa16.71■□□□□ 0.27
SLC1A4-201ENST00000234256 TRIT1Q9H3H1 467 aaKnown RBP16.71■□□□□ 0.27
SLC1A4-201ENST00000234256 DPEP2Q9H4A9 486 aa16.71■□□□□ 0.27
SLC1A4-201ENST00000234256 FNIP2Q9P278 1114 aa16.71■□□□□ 0.27
SLC1A4-201ENST00000234256 ATP6V1G1O75348 118 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms