RNA–Protein interactions for RNA: ENST00000641853.1

CASC19-261, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,638 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-261ENST00000641853 NUDCD1Q96RS6 583 aa4.83□□□□□ -1.64
CASC19-261ENST00000641853 SLX1AQ9BQ83 275 aa4.83□□□□□ -1.64
CASC19-261ENST00000641853 RPAP3Q9H6T3 665 aaPredicted RBP4.83□□□□□ -1.64
CASC19-261ENST00000641853 VCPKMTQ9H867 229 aa4.83□□□□□ -1.64
CASC19-261ENST00000641853 NYAP2Q9P242 653 aa4.83□□□□□ -1.64
CASC19-261ENST00000641853 RCC2Q9P258 522 aaKnown RBP4.83□□□□□ -1.64
CASC19-261ENST00000641853 PLIN4Q96Q06 1357 aa4.83□□□□□ -1.64
CASC19-261ENST00000641853 A0A0D9SFI3 127 aa4.83□□□□□ -1.64
CASC19-261ENST00000641853 OR2M5A3KFT3 312 aa4.83□□□□□ -1.64
CASC19-261ENST00000641853 PLK4O00444 970 aa4.83□□□□□ -1.64
CASC19-261ENST00000641853 VILLO15195 856 aa4.83□□□□□ -1.64
CASC19-261ENST00000641853 ZBTB43O43298 467 aa4.83□□□□□ -1.64
CASC19-261ENST00000641853 TSPY3P0CV98 308 aa4.83□□□□□ -1.64
CASC19-261ENST00000641853 TSPY8P0CW00 308 aa4.83□□□□□ -1.64
CASC19-261ENST00000641853 PCP11498 1178 aaKnown RBP4.83□□□□□ -1.64
CASC19-261ENST00000641853 EEF2P13639 858 aaKnown RBP4.83□□□□□ -1.64
CASC19-261ENST00000641853 HOXA1P49639 335 aaPredicted RBP4.83□□□□□ -1.64
CASC19-261ENST00000641853 SUOXP51687 545 aa4.83□□□□□ -1.64
CASC19-261ENST00000641853 UBXN2AP68543 259 aa4.83□□□□□ -1.64
CASC19-261ENST00000641853 PPP2R2BQ00005 443 aa4.83□□□□□ -1.64
CASC19-261ENST00000641853 DMP1Q13316 513 aaPredicted RBP4.83□□□□□ -1.64
CASC19-261ENST00000641853 ACVR2BQ13705 512 aa4.83□□□□□ -1.64
CASC19-261ENST00000641853 MEP1AQ16819 746 aa4.83□□□□□ -1.64
CASC19-261ENST00000641853 GFI1BQ5VTD9 330 aa4.83□□□□□ -1.64
CASC19-261ENST00000641853 GALNT13Q8IUC8 556 aa4.83□□□□□ -1.64
CASC19-261ENST00000641853 C1orf52Q8N6N3 182 aaKnown RBP4.83□□□□□ -1.64
CASC19-261ENST00000641853 NR4A3Q92570 626 aa4.83□□□□□ -1.64
CASC19-261ENST00000641853 HES6Q96HZ4 224 aa4.83□□□□□ -1.64
CASC19-261ENST00000641853 ST6GAL2Q96JF0 529 aa4.83□□□□□ -1.64
CASC19-261ENST00000641853 SEMA6AQ9H2E6 1030 aa4.83□□□□□ -1.64
CASC19-261ENST00000641853 RAD21L1Q9H4I0 556 aa4.83□□□□□ -1.64
CASC19-261ENST00000641853 MDFICQ9P1T7 246 aa4.83□□□□□ -1.64
CASC19-261ENST00000641853 CCDC171Q6TFL3 1326 aa4.82□□□□□ -1.64
CASC19-261ENST00000641853 IGKV6D-41A0A0C4DH26 115 aa4.82□□□□□ -1.64
CASC19-261ENST00000641853 ANKRD66B4E2M5 251 aa4.82□□□□□ -1.64
CASC19-261ENST00000641853 TMCC2O75069 709 aa4.82□□□□□ -1.64
CASC19-261ENST00000641853 FLOT1O75955 427 aa4.82□□□□□ -1.64
CASC19-261ENST00000641853 GCNT3O95395 438 aa4.82□□□□□ -1.64
CASC19-261ENST00000641853 TUBBP07437 444 aa4.82□□□□□ -1.64
CASC19-261ENST00000641853 HSPD1P10809 573 aaKnown RBP4.82□□□□□ -1.64
CASC19-261ENST00000641853 FGF5P12034 268 aa4.82□□□□□ -1.64
CASC19-261ENST00000641853 CSF2RAP15509 400 aa4.82□□□□□ -1.64
CASC19-261ENST00000641853 TCEA1P23193 301 aaKnown RBP4.82□□□□□ -1.64
CASC19-261ENST00000641853 MCCP23508 829 aa4.82□□□□□ -1.64
CASC19-261ENST00000641853 COPB2P35606 906 aa4.82□□□□□ -1.64
CASC19-261ENST00000641853 DCTP40126 519 aa4.82□□□□□ -1.64
CASC19-261ENST00000641853 TERF1P54274 439 aa4.82□□□□□ -1.64
CASC19-261ENST00000641853 FAM205BPQ63HN1 556 aa4.82□□□□□ -1.64
CASC19-261ENST00000641853 C4orf50Q6ZRC1 276 aa4.82□□□□□ -1.64
CASC19-261ENST00000641853 ANO5Q75V66 913 aa4.82□□□□□ -1.64
CASC19-261ENST00000641853 EPHX4Q8IUS5 362 aa4.82□□□□□ -1.64
CASC19-261ENST00000641853 GMCL1P1Q8NEA9 526 aa4.82□□□□□ -1.64
CASC19-261ENST00000641853 SPATA3Q8NHX4 192 aa4.82□□□□□ -1.64
CASC19-261ENST00000641853 DDOQ99489 341 aa4.82□□□□□ -1.64
CASC19-261ENST00000641853 HGH1Q9BTY7 390 aa4.82□□□□□ -1.64
CASC19-261ENST00000641853 GHITMQ9H3K2 345 aa4.82□□□□□ -1.64
CASC19-261ENST00000641853 RNF41Q9H4P4 317 aaPredicted RBP4.82□□□□□ -1.64
CASC19-261ENST00000641853 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.82□□□□□ -1.64
CASC19-261ENST00000641853 CTNNA3Q9UI47 895 aa4.82□□□□□ -1.64
CASC19-261ENST00000641853 RAD50Q92878 1312 aa4.82□□□□□ -1.64
CASC19-261ENST00000641853 HTTP42858 3142 aa4.81□□□□□ -1.64
CASC19-261ENST00000641853 A0A0G2JNG1 304 aa4.81□□□□□ -1.64
CASC19-261ENST00000641853 FSD2A1L4K1 749 aa4.81□□□□□ -1.64
CASC19-261ENST00000641853 SLC15A5A6NIM6 579 aa4.81□□□□□ -1.64
CASC19-261ENST00000641853 TSPY2A6NKD2 308 aa4.81□□□□□ -1.64
CASC19-261ENST00000641853 F5H6K3 240 aa4.81□□□□□ -1.64
CASC19-261ENST00000641853 PRDM1O75626 825 aa4.81□□□□□ -1.64
CASC19-261ENST00000641853 BMP10O95393 424 aa4.81□□□□□ -1.64
CASC19-261ENST00000641853 TFAP2AP05549 437 aa4.81□□□□□ -1.64
CASC19-261ENST00000641853 KRT19P08727 400 aa4.81□□□□□ -1.64
CASC19-261ENST00000641853 ZNF23P17027 643 aa4.81□□□□□ -1.64
CASC19-261ENST00000641853 NR2F2P24468 414 aa4.81□□□□□ -1.64
CASC19-261ENST00000641853 HOXD13P35453 343 aa4.81□□□□□ -1.64
CASC19-261ENST00000641853 PSMB10P40306 273 aa4.81□□□□□ -1.64
CASC19-261ENST00000641853 DRG2P55039 364 aaKnown RBP4.81□□□□□ -1.64
CASC19-261ENST00000641853 MBTD1Q05BQ5 628 aa4.81□□□□□ -1.64
CASC19-261ENST00000641853 KLRC3Q07444 240 aa4.81□□□□□ -1.64
CASC19-261ENST00000641853 KIR2DS5Q14953 304 aa4.81□□□□□ -1.64
CASC19-261ENST00000641853 PLA2G4FQ68DD2 849 aa4.81□□□□□ -1.64
CASC19-261ENST00000641853 CWC27Q6UX04 472 aaKnown RBP4.81□□□□□ -1.64
CASC19-261ENST00000641853 CENPQQ7L2Z9 268 aaPredicted RBP4.81□□□□□ -1.64
CASC19-261ENST00000641853 GPR142Q7Z601 462 aa4.81□□□□□ -1.64
CASC19-261ENST00000641853 ZNF589Q86UQ0 364 aaPredicted RBP4.81□□□□□ -1.64
CASC19-261ENST00000641853 KLHDC8BQ8IXV7 354 aa4.81□□□□□ -1.64
CASC19-261ENST00000641853 SCRN2Q96FV2 425 aa4.81□□□□□ -1.64
CASC19-261ENST00000641853 C17orf77Q96MU5 243 aa4.81□□□□□ -1.64
CASC19-261ENST00000641853 SLC22A12Q96S37 553 aa4.81□□□□□ -1.64
CASC19-261ENST00000641853 TREX2Q9BQ50 279 aaPredicted RBP4.81□□□□□ -1.64
CASC19-261ENST00000641853 SPATC1LQ9H0A9 340 aa4.81□□□□□ -1.64
CASC19-261ENST00000641853 TFB2MQ9H5Q4 396 aaKnown RBP4.81□□□□□ -1.64
CASC19-261ENST00000641853 CLIP2Q9UDT6 1046 aa4.81□□□□□ -1.64
CASC19-261ENST00000641853 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.81□□□□□ -1.64
CASC19-261ENST00000641853 BAZ2AQ9UIF9 1905 aaKnown RBP4.81□□□□□ -1.64
CASC19-261ENST00000641853 TEX13DA0A0J9YY54 714 aaPredicted RBP4.8□□□□□ -1.64
CASC19-261ENST00000641853 A6NCN8 305 aa4.8□□□□□ -1.64
CASC19-261ENST00000641853 PRKNO60260 465 aaPredicted RBP4.8□□□□□ -1.64
CASC19-261ENST00000641853 SYNCRIPO60506 623 aaKnown RBP4.8□□□□□ -1.64
CASC19-261ENST00000641853 RANBP6O60518 1105 aaKnown RBP4.8□□□□□ -1.64
CASC19-261ENST00000641853 GJB3O75712 270 aa4.8□□□□□ -1.64
CASC19-261ENST00000641853 CNMDO75829 334 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 131.5 ms