RNA–Protein interactions for RNA: ENST00000601236.1

U2AF1L4-221, Transcript of U2 small nuclear RNA auxiliary factor 1 like 4, human

TSL 3

Gene U2AF1L4, Length 455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
U2AF1L4-221	ENST00000601236	ABHD16B	Q9H3Z7	469 aa		11.46	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	SOX17	Q9H6I2	414 aa	Predicted RBP	11.46	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	ZFP14	Q9HCL3	533 aa		11.46	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	TAS2R9	Q9NYW1	312 aa		11.46	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	GMPR2	Q9P2T1	348 aa	Known RBP	11.46	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	ZNF225	Q9UK10	706 aa		11.46	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	SNX6	Q9UNH7	406 aa		11.46	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	NEUROG3	Q9Y4Z2	214 aa		11.46	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	HS3ST4	Q9Y661	456 aa		11.46	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	EVPL	Q92817	2033 aa		11.46	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	PATJ	Q8NI35	1801 aa		11.46	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	CXorf51A	A0A1B0GTR3	108 aa		11.45	□□□□□ -0.58
U2AF1L4-221	ENST00000601236		B8ZZF3	427 aa		11.45	□□□□□ -0.58
U2AF1L4-221	ENST00000601236		E5RI56	91 aa		11.45	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	CCRL2	O00421	344 aa		11.45	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	KPNA6	O60684	536 aa		11.45	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	HCN1	O60741	890 aa		11.45	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	USP2	O75604	605 aa	Predicted RBP	11.45	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	OR4F21	O95013	312 aa		11.45	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	APBA3	O96018	575 aa		11.45	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	SLC4A1	P02730	911 aa		11.45	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	SLC2A4	P14672	509 aa		11.45	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	ZNF7	P17097	686 aa	Predicted RBP	11.45	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	TCEA1	P23193	301 aa	Known RBP	11.45	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	KDELR2	P33947	212 aa		11.45	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	BMPR1A	P36894	532 aa		11.45	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	MAPK9	P45984	424 aa		11.45	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	RGS6	P49758	472 aa		11.45	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	DAP	P51397	102 aa		11.45	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	PNLIPRP1	P54315	467 aa		11.45	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	CACNG1	Q06432	222 aa		11.45	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	ITK	Q08881	620 aa		11.45	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	SMAD1	Q15797	465 aa	Known RBP	11.45	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	PCSK7	Q16549	785 aa		11.45	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	AAK1	Q2M2I8	961 aa		11.45	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	VMAC	Q2NL98	169 aa		11.45	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	FAM174B	Q3ZCQ3	159 aa		11.45	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	HSD17B12	Q53GQ0	312 aa		11.45	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	YIF1B	Q5BJH7	314 aa		11.45	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	ARMC4	Q5T2S8	1044 aa		11.45	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	PIM3	Q86V86	326 aa		11.45	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	CYP4Z1	Q86W10	505 aa		11.45	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	ATG16L2	Q8NAA4	619 aa		11.45	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	VPS37A	Q8NEZ2	397 aa		11.45	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	ZNF675	Q8TD23	568 aa		11.45	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	MYLPF	Q96A32	169 aa		11.45	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	AP2M1	Q96CW1	435 aa		11.45	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	FCRL1	Q96LA6	429 aa		11.45	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	KCNA7	Q96RP8	456 aa		11.45	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	PHOX2B	Q99453	314 aa		11.45	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	PKMYT1	Q99640	499 aa		11.45	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	MED18	Q9BUE0	208 aa		11.45	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	C6orf62	Q9GZU0	229 aa	Predicted RBP	11.45	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	SIK2	Q9H0K1	926 aa		11.45	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	RIBC2	Q9H4K1	309 aa		11.45	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	QTRT2	Q9H974	415 aa	Known RBP	11.45	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	ISYNA1	Q9NPH2	558 aa		11.45	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	SACM1L	Q9NTJ5	587 aa		11.45	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	IL37	Q9NZH6	218 aa		11.45	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	SLAMF8	Q9P0V8	285 aa		11.45	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	GALP	Q9UBC7	116 aa		11.45	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	KL	Q9UEF7	1012 aa		11.45	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	SNX7	Q9UNH6	387 aa		11.45	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	SAMHD1	Q9Y3Z3	626 aa	Known RBP	11.45	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	ASB4	Q9Y574	426 aa		11.45	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	TIMM22	Q9Y584	194 aa		11.45	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	PAPPA2	Q9BXP8	1791 aa		11.44	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	MYBPHL	A2RUH7	354 aa		11.44	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	HOXC11	O43248	304 aa	Predicted RBP	11.44	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	XPNPEP2	O43895	674 aa		11.44	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	ZNF623	O75123	536 aa		11.44	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	FADS2	O95864	444 aa	Known RBP	11.44	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	CHRNB1	P11230	501 aa		11.44	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	IL7	P13232	177 aa		11.44	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	EPB42	P16452	691 aa		11.44	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	ALOX12	P18054	663 aa		11.44	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	CPN2	P22792	545 aa		11.44	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	CXCR2	P25025	360 aa		11.44	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	ITGB7	P26010	798 aa		11.44	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	GGT5	P36269	586 aa		11.44	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	RPL3	P39023	403 aa	Known RBP	11.44	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	ASMT	P46597	345 aa		11.44	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	HNMT	P50135	292 aa		11.44	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	RORC	P51449	518 aa		11.44	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	TBX4	P57082	545 aa		11.44	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	CDC42	P60953	191 aa		11.44	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	RPS14	P62263	151 aa	Known RBP	11.44	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	RPP38	P78345	283 aa	Known RBP	11.44	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	TARDBP	Q13148	414 aa	Known RBP eCLIP	11.44	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	GBX1	Q14549	363 aa		11.44	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	PTPRN	Q16849	979 aa		11.44	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	DUOXA1	Q1HG43	343 aa		11.44	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	USP39	Q53GS9	565 aa	Known RBP	11.44	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	ATAD3C	Q5T2N8	411 aa		11.44	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	ARTN	Q5T4W7	220 aa		11.44	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	ANXA8L1	Q5VT79	327 aa		11.44	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	ZNF772	Q68DY9	489 aa	Predicted RBP	11.44	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	LRRC70	Q7Z2Q7	622 aa		11.44	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	GOLGA7	Q7Z5G4	137 aa		11.44	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	MRPL10	Q7Z7H8	261 aa	Known RBP	11.44	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms