RNA–Protein interactions for RNA: ENST00000576921.1

HCFC1R1-209, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 1 (best)

Gene HCFC1R1, Length 1,199 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-209ENST00000576921 MATN4O95460 622 aa20.34■□□□□ 0.85
HCFC1R1-209ENST00000576921 PAFAH1B1P43034 410 aa20.34■□□□□ 0.85
HCFC1R1-209ENST00000576921 CLCN7P51798 805 aa20.34■□□□□ 0.85
HCFC1R1-209ENST00000576921 UGT8Q16880 541 aa20.34■□□□□ 0.85
HCFC1R1-209ENST00000576921 MSS51Q4VC12 460 aa20.34■□□□□ 0.85
HCFC1R1-209ENST00000576921 EEF1AKMT2Q5JPI9 291 aaKnown RBP20.34■□□□□ 0.85
HCFC1R1-209ENST00000576921 C1orf189Q5VU69 101 aa20.34■□□□□ 0.85
HCFC1R1-209ENST00000576921 FAM69BQ5VUD6 431 aa20.34■□□□□ 0.85
HCFC1R1-209ENST00000576921 ZNF549Q6P9A3 640 aa20.34■□□□□ 0.85
HCFC1R1-209ENST00000576921 FAM198BQ6UWH4 519 aa20.34■□□□□ 0.85
HCFC1R1-209ENST00000576921 SYDE1Q6ZW31 735 aaPredicted RBP20.34■□□□□ 0.85
HCFC1R1-209ENST00000576921 SPNS2Q8IVW8 549 aa20.34■□□□□ 0.85
HCFC1R1-209ENST00000576921 DNAJC22Q8N4W6 341 aa20.34■□□□□ 0.85
HCFC1R1-209ENST00000576921 ZNF655Q8N720 491 aaPredicted RBP20.34■□□□□ 0.85
HCFC1R1-209ENST00000576921 GIMAP7Q8NHV1 300 aa20.34■□□□□ 0.85
HCFC1R1-209ENST00000576921 C9orf43Q8TAL5 461 aaPredicted RBP20.34■□□□□ 0.85
HCFC1R1-209ENST00000576921 DENND1AQ8TEH3 1009 aa20.34■□□□□ 0.85
HCFC1R1-209ENST00000576921 ZNF71Q9NQZ8 489 aaPredicted RBP20.34■□□□□ 0.85
HCFC1R1-209ENST00000576921 SNX7Q9UNH6 387 aa20.34■□□□□ 0.85
HCFC1R1-209ENST00000576921 AP1M2Q9Y6Q5 423 aa20.34■□□□□ 0.85
HCFC1R1-209ENST00000576921 ARHGEF33A8MVX0 844 aa20.33■□□□□ 0.85
HCFC1R1-209ENST00000576921 C9J4A7 227 aa20.33■□□□□ 0.85
HCFC1R1-209ENST00000576921 ERVK-10P10266 1014 aa20.33■□□□□ 0.85
HCFC1R1-209ENST00000576921 AGXTP21549 392 aa20.33■□□□□ 0.85
HCFC1R1-209ENST00000576921 TSTA3Q13630 321 aaPredicted RBP20.33■□□□□ 0.85
HCFC1R1-209ENST00000576921 FIGLAQ6QHK4 219 aa20.33■□□□□ 0.85
HCFC1R1-209ENST00000576921 PTRH1Q86Y79 214 aaKnown RBP20.33■□□□□ 0.85
HCFC1R1-209ENST00000576921 KCNJ9Q92806 393 aa20.33■□□□□ 0.85
HCFC1R1-209ENST00000576921 CFAP36Q96G28 342 aa20.33■□□□□ 0.85
HCFC1R1-209ENST00000576921 GPR21Q99679 349 aa20.33■□□□□ 0.85
HCFC1R1-209ENST00000576921 MIPEPQ99797 713 aa20.33■□□□□ 0.85
HCFC1R1-209ENST00000576921 EBNA1BP2Q99848 306 aaKnown RBP20.33■□□□□ 0.85
HCFC1R1-209ENST00000576921 NLNQ9BYT8 704 aa20.33■□□□□ 0.85
HCFC1R1-209ENST00000576921 FAM114A2Q9NRY5 505 aa20.33■□□□□ 0.85
HCFC1R1-209ENST00000576921 TXLNGQ9NUQ3 528 aa20.33■□□□□ 0.85
HCFC1R1-209ENST00000576921 EURLQ9NYK6 297 aa20.33■□□□□ 0.85
HCFC1R1-209ENST00000576921 SPATA7Q9P0W8 599 aa20.33■□□□□ 0.85
HCFC1R1-209ENST00000576921 DHCR7Q9UBM7 475 aaKnown RBP20.33■□□□□ 0.85
HCFC1R1-209ENST00000576921 H3BMH7 237 aa20.32■□□□□ 0.84
HCFC1R1-209ENST00000576921 TTI1O43156 1089 aa20.32■□□□□ 0.84
HCFC1R1-209ENST00000576921 PSIP1O75475 530 aaKnown RBP20.32■□□□□ 0.84
HCFC1R1-209ENST00000576921 HAUS5O94927 633 aa20.32■□□□□ 0.84
HCFC1R1-209ENST00000576921 TTC4O95801 387 aa20.32■□□□□ 0.84
HCFC1R1-209ENST00000576921 RECKO95980 971 aa20.32■□□□□ 0.84
HCFC1R1-209ENST00000576921 CATP04040 527 aaKnown RBP20.32■□□□□ 0.84
HCFC1R1-209ENST00000576921 RAB40ALP0C0E4 278 aa20.32■□□□□ 0.84
HCFC1R1-209ENST00000576921 CBSLP0DN79 551 aa20.32■□□□□ 0.84
HCFC1R1-209ENST00000576921 IVDP26440 423 aa20.32■□□□□ 0.84
HCFC1R1-209ENST00000576921 CBSP35520 551 aa20.32■□□□□ 0.84
HCFC1R1-209ENST00000576921 GRIA3P42263 894 aa20.32■□□□□ 0.84
HCFC1R1-209ENST00000576921 FASTKQ14296 549 aaKnown RBP20.32■□□□□ 0.84
HCFC1R1-209ENST00000576921 MORF4L2Q15014 288 aa20.32■□□□□ 0.84
HCFC1R1-209ENST00000576921 NCF4Q15080 339 aa20.32■□□□□ 0.84
HCFC1R1-209ENST00000576921 SPANXN3Q5MJ09 141 aa20.32■□□□□ 0.84
HCFC1R1-209ENST00000576921 HP1BP3Q5SSJ5 553 aaPredicted RBP20.32■□□□□ 0.84
HCFC1R1-209ENST00000576921 FCRL6Q6DN72 434 aa20.32■□□□□ 0.84
HCFC1R1-209ENST00000576921 TLDC1Q6P9B6 456 aa20.32■□□□□ 0.84
HCFC1R1-209ENST00000576921 OR9A1PQ8NGU1 263 aa20.32■□□□□ 0.84
HCFC1R1-209ENST00000576921 GABPB2Q8TAK5 448 aaPredicted RBP20.32■□□□□ 0.84
HCFC1R1-209ENST00000576921 ABHD17AQ96GS6 310 aa20.32■□□□□ 0.84
HCFC1R1-209ENST00000576921 PWWP2AQ96N64 755 aa20.32■□□□□ 0.84
HCFC1R1-209ENST00000576921 DPH2Q9BQC3 489 aaPredicted RBP20.32■□□□□ 0.84
HCFC1R1-209ENST00000576921 NDC1Q9BTX1 674 aa20.32■□□□□ 0.84
HCFC1R1-209ENST00000576921 TRIM31Q9BZY9 425 aa20.32■□□□□ 0.84
HCFC1R1-209ENST00000576921 TCFL5Q9UL49 500 aa20.32■□□□□ 0.84
HCFC1R1-209ENST00000576921 SRPK3Q9UPE1 567 aa20.32■□□□□ 0.84
HCFC1R1-209ENST00000576921 CHMP2BQ9UQN3 213 aa20.32■□□□□ 0.84
HCFC1R1-209ENST00000576921 COMMD10Q9Y6G5 202 aa20.32■□□□□ 0.84
HCFC1R1-209ENST00000576921 TENM4Q6N022 2769 aa20.31■□□□□ 0.84
HCFC1R1-209ENST00000576921 CCDC188H7C350 402 aa20.31■□□□□ 0.84
HCFC1R1-209ENST00000576921 PYCARD-AS1I3L0S3 204 aa20.31■□□□□ 0.84
HCFC1R1-209ENST00000576921 FANCGO15287 622 aa20.31■□□□□ 0.84
HCFC1R1-209ENST00000576921 VPS26AO75436 327 aa20.31■□□□□ 0.84
HCFC1R1-209ENST00000576921 RFPL1O75677 317 aa20.31■□□□□ 0.84
HCFC1R1-209ENST00000576921 SYF2O95926 243 aaKnown RBP20.31■□□□□ 0.84
HCFC1R1-209ENST00000576921 CAPN1P07384 714 aa20.31■□□□□ 0.84
HCFC1R1-209ENST00000576921 PMS2P54278 862 aa20.31■□□□□ 0.84
HCFC1R1-209ENST00000576921 SLC9A5Q14940 896 aa20.31■□□□□ 0.84
HCFC1R1-209ENST00000576921 RHBDD2Q6NTF9 364 aa20.31■□□□□ 0.84
HCFC1R1-209ENST00000576921 MCATQ8IVS2 390 aaKnown RBP20.31■□□□□ 0.84
HCFC1R1-209ENST00000576921 IGDCC3Q8IVU1 814 aa20.31■□□□□ 0.84
HCFC1R1-209ENST00000576921 PDIK1LQ8N165 341 aa20.31■□□□□ 0.84
HCFC1R1-209ENST00000576921 OR2L3Q8NG85 312 aa20.31■□□□□ 0.84
HCFC1R1-209ENST00000576921 HMGCLL1Q8TB92 370 aa20.31■□□□□ 0.84
HCFC1R1-209ENST00000576921 NDNQ99608 321 aa20.31■□□□□ 0.84
HCFC1R1-209ENST00000576921 NAT9Q9BTE0 207 aa20.31■□□□□ 0.84
HCFC1R1-209ENST00000576921 ACAT2Q9BWD1 397 aa20.31■□□□□ 0.84
HCFC1R1-209ENST00000576921 PPANQ9NQ55 473 aaKnown RBP20.31■□□□□ 0.84
HCFC1R1-209ENST00000576921 GPN3Q9UHW5 284 aaPredicted RBP20.31■□□□□ 0.84
HCFC1R1-209ENST00000576921 MED16Q9Y2X0 877 aa20.31■□□□□ 0.84
HCFC1R1-209ENST00000576921 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.31■□□□□ 0.849e-7■■■■□ 22.7
HCFC1R1-209ENST00000576921 TNRC6AQ8NDV7 1962 aaKnown RBP20.3■□□□□ 0.84
HCFC1R1-209ENST00000576921 ANKRD12Q6UB98 2062 aa20.3■□□□□ 0.84
HCFC1R1-209ENST00000576921 J3QKU1 62 aa20.3■□□□□ 0.84
HCFC1R1-209ENST00000576921 MYO1CO00159 1063 aa20.3■□□□□ 0.84
HCFC1R1-209ENST00000576921 PRICKLE3O43900 615 aaPredicted RBP20.3■□□□□ 0.84
HCFC1R1-209ENST00000576921 DNAJB5O75953 348 aa20.3■□□□□ 0.84
HCFC1R1-209ENST00000576921 FKBP9O95302 570 aa20.3■□□□□ 0.84
HCFC1R1-209ENST00000576921 ITGA8P53708 1063 aa20.3■□□□□ 0.84
HCFC1R1-209ENST00000576921 CYP2A13Q16696 494 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms