RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 ABHD17AQ96GS6 310 aa16.11■□□□□ 0.17
USB1-211ENST00000565662 SPHK1Q9NYA1 384 aa16.11■□□□□ 0.17
USB1-211ENST00000565662 EURLQ9NYK6 297 aa16.11■□□□□ 0.17
USB1-211ENST00000565662 NXT1Q9UKK6 140 aaKnown RBP16.11■□□□□ 0.17
USB1-211ENST00000565662 CRYL1Q9Y2S2 319 aa16.11■□□□□ 0.17
USB1-211ENST00000565662 CFAP46Q8IYW2 2715 aa16.1■□□□□ 0.17
USB1-211ENST00000565662 ZCWPW2A0A1B0GU75 182 aa16.1■□□□□ 0.17
USB1-211ENST00000565662 PRPF4O43172 522 aaKnown RBP eCLIP16.1■□□□□ 0.17
USB1-211ENST00000565662 PSIP1O75475 530 aaKnown RBP16.1■□□□□ 0.17
USB1-211ENST00000565662 ALBP02768 609 aa16.1■□□□□ 0.17
USB1-211ENST00000565662 MPC1LP0DKB6 136 aa16.1■□□□□ 0.17
USB1-211ENST00000565662 ERGP11308 486 aa16.1■□□□□ 0.17
USB1-211ENST00000565662 CASRP41180 1078 aa16.1■□□□□ 0.17
USB1-211ENST00000565662 GABRA4P48169 554 aa16.1■□□□□ 0.17
USB1-211ENST00000565662 RGS4P49798 205 aa16.1■□□□□ 0.17
USB1-211ENST00000565662 CSRP3P50461 194 aa16.1■□□□□ 0.17
USB1-211ENST00000565662 CYP2A13Q16696 494 aa16.1■□□□□ 0.17
USB1-211ENST00000565662 SPANXN3Q5MJ09 141 aa16.1■□□□□ 0.17
USB1-211ENST00000565662 RNASEH2BQ5TBB1 312 aaKnown RBP16.1■□□□□ 0.17
USB1-211ENST00000565662 ANKRD22Q5VYY1 191 aa16.1■□□□□ 0.17
USB1-211ENST00000565662 CNSTQ6PJW8 725 aa16.1■□□□□ 0.17
USB1-211ENST00000565662 NAPRTQ6XQN6 538 aa16.1■□□□□ 0.17
USB1-211ENST00000565662 CENPUQ71F23 418 aa16.1■□□□□ 0.17
USB1-211ENST00000565662 DNAJC22Q8N4W6 341 aa16.1■□□□□ 0.17
USB1-211ENST00000565662 LINC01555Q8NAE3 123 aa16.1■□□□□ 0.17
USB1-211ENST00000565662 OR9A1PQ8NGU1 263 aa16.1■□□□□ 0.17
USB1-211ENST00000565662 COG1Q8WTW3 980 aa16.1■□□□□ 0.17
USB1-211ENST00000565662 SMPDL3AQ92484 453 aa16.1■□□□□ 0.17
USB1-211ENST00000565662 PDLIM2Q96JY6 352 aa16.1■□□□□ 0.17
USB1-211ENST00000565662 FER1L6-AS2Q96M78 137 aa16.1■□□□□ 0.17
USB1-211ENST00000565662 NAPGQ99747 312 aaPredicted RBP16.1■□□□□ 0.17
USB1-211ENST00000565662 C20orf96Q9NUD7 363 aaPredicted RBP16.1■□□□□ 0.17
USB1-211ENST00000565662 IFT80Q9P2H3 777 aaPredicted RBP16.1■□□□□ 0.17
USB1-211ENST00000565662 SAR1BQ9Y6B6 198 aa16.1■□□□□ 0.17
USB1-211ENST00000565662 A0A1B0GX78 115 aa16.09■□□□□ 0.17
USB1-211ENST00000565662 PABPN1LA6NDY0 278 aaKnown RBP16.09■□□□□ 0.17
USB1-211ENST00000565662 H3BMH7 237 aa16.09■□□□□ 0.17
USB1-211ENST00000565662 MYO1CO00159 1063 aa16.09■□□□□ 0.17
USB1-211ENST00000565662 TXNDC9O14530 226 aa16.09■□□□□ 0.17
USB1-211ENST00000565662 ZBTB14O43829 449 aa16.09■□□□□ 0.17
USB1-211ENST00000565662 NIPSNAP2O75323 286 aa16.09■□□□□ 0.17
USB1-211ENST00000565662 AVILO75366 819 aa16.09■□□□□ 0.17
USB1-211ENST00000565662 HRH2P25021 359 aa16.09■□□□□ 0.17
USB1-211ENST00000565662 VARSP26640 1264 aaKnown RBP16.09■□□□□ 0.17
USB1-211ENST00000565662 PEBP1P30086 187 aaKnown RBP16.09■□□□□ 0.17
USB1-211ENST00000565662 FOLR3P41439 243 aa16.09■□□□□ 0.17
USB1-211ENST00000565662 EMP3P54852 163 aa16.09■□□□□ 0.17
USB1-211ENST00000565662 RELAQ04206 551 aa16.09■□□□□ 0.17
USB1-211ENST00000565662 GRB7Q14451 532 aa16.09■□□□□ 0.17
USB1-211ENST00000565662 SSPNQ14714 243 aa16.09■□□□□ 0.17
USB1-211ENST00000565662 PAPD7Q5XG87 772 aaKnown RBP16.09■□□□□ 0.17
USB1-211ENST00000565662 ZNF385CQ66K41 422 aaPredicted RBP16.09■□□□□ 0.17
USB1-211ENST00000565662 FAM199XQ6PEV8 388 aaPredicted RBP16.09■□□□□ 0.17
USB1-211ENST00000565662 FIGLAQ6QHK4 219 aa16.09■□□□□ 0.17
USB1-211ENST00000565662 CES3Q6UWW8 571 aa16.09■□□□□ 0.17
USB1-211ENST00000565662 TRIM73Q86UV7 250 aa16.09■□□□□ 0.17
USB1-211ENST00000565662 KCNMB4Q86W47 210 aa16.09■□□□□ 0.17
USB1-211ENST00000565662 PALM2Q8IXS6 379 aa16.09■□□□□ 0.17
USB1-211ENST00000565662 SLC38A9Q8NBW4 561 aa16.09■□□□□ 0.17
USB1-211ENST00000565662 GBP5Q96PP8 586 aa16.09■□□□□ 0.17
USB1-211ENST00000565662 EBNA1BP2Q99848 306 aaKnown RBP16.09■□□□□ 0.17
USB1-211ENST00000565662 WDR54Q9H977 334 aa16.09■□□□□ 0.17
USB1-211ENST00000565662 TAS2R13Q9NYV9 303 aa16.09■□□□□ 0.17
USB1-211ENST00000565662 PLAGL1Q9UM63 463 aa16.09■□□□□ 0.17
USB1-211ENST00000565662 HELZ2Q9BYK8 2649 aaKnown RBP16.09■□□□□ 0.17
USB1-211ENST00000565662 GOLGA8MH3BSY2 632 aa16.08■□□□□ 0.16
USB1-211ENST00000565662 PEX12O00623 359 aa16.08■□□□□ 0.16
USB1-211ENST00000565662 PCDH17O14917 1159 aa16.08■□□□□ 0.16
USB1-211ENST00000565662 WISP1O95388 367 aa16.08■□□□□ 0.16
USB1-211ENST00000565662 TPBGLP0DKB5 382 aa16.08■□□□□ 0.16
USB1-211ENST00000565662 ERVK-10P10266 1014 aa16.08■□□□□ 0.16
USB1-211ENST00000565662 SLC1A2P43004 574 aa16.08■□□□□ 0.16
USB1-211ENST00000565662 PGDP52209 483 aa16.08■□□□□ 0.16
USB1-211ENST00000565662 GNG11P61952 73 aa16.08■□□□□ 0.16
USB1-211ENST00000565662 ABATP80404 500 aa16.08■□□□□ 0.16
USB1-211ENST00000565662 SP140Q13342 867 aa16.08■□□□□ 0.16
USB1-211ENST00000565662 CRYMQ14894 314 aa16.08■□□□□ 0.16
USB1-211ENST00000565662 KLHL38Q2WGJ6 581 aa16.08■□□□□ 0.16
USB1-211ENST00000565662 PRMT9Q6P2P2 845 aa16.08■□□□□ 0.16
USB1-211ENST00000565662 TEX19Q8NA77 164 aa16.08■□□□□ 0.16
USB1-211ENST00000565662 BBOF1Q8ND07 529 aa16.08■□□□□ 0.16
USB1-211ENST00000565662 OR2L3Q8NG85 312 aa16.08■□□□□ 0.16
USB1-211ENST00000565662 OR2Y1Q8NGV0 311 aa16.08■□□□□ 0.16
USB1-211ENST00000565662 ADAMTS17Q8TE56 1095 aa16.08■□□□□ 0.16
USB1-211ENST00000565662 INPP5DQ92835 1189 aa16.08■□□□□ 0.16
USB1-211ENST00000565662 MVB12AQ96EY5 273 aa16.08■□□□□ 0.16
USB1-211ENST00000565662 SIGLEC10Q96LC7 697 aa16.08■□□□□ 0.16
USB1-211ENST00000565662 SELENOSQ9BQE4 189 aa16.08■□□□□ 0.16
USB1-211ENST00000565662 PCBD2Q9H0N5 130 aa16.08■□□□□ 0.16
USB1-211ENST00000565662 ING2Q9H160 280 aa16.08■□□□□ 0.16
USB1-211ENST00000565662 KCNF1Q9H3M0 494 aa16.08■□□□□ 0.16
USB1-211ENST00000565662 CLMPQ9H6B4 373 aa16.08■□□□□ 0.16
USB1-211ENST00000565662 FAM60AQ9NP50 221 aa16.08■□□□□ 0.16
USB1-211ENST00000565662 TRMT1Q9NXH9 659 aaKnown RBP16.08■□□□□ 0.16
USB1-211ENST00000565662 TRMT6Q9UJA5 497 aaKnown RBP16.08■□□□□ 0.16
USB1-211ENST00000565662 FBXO5Q9UKT4 447 aa16.08■□□□□ 0.16
USB1-211ENST00000565662 DHRS7Q9Y394 339 aa16.08■□□□□ 0.16
USB1-211ENST00000565662 ZNF451Q9Y4E5 1061 aa16.08■□□□□ 0.16
USB1-211ENST00000565662 SEC16AO15027 2179 aa16.07■□□□□ 0.16
USB1-211ENST00000565662 GCN1Q92616 2671 aaKnown RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms