RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 SCIMPQ6UWF3 145 aa13.38□□□□□ -0.27
TPM1-215ENST00000558868 Q6ZS52 159 aa13.38□□□□□ -0.27
TPM1-215ENST00000558868 Q6ZSR9 355 aa13.38□□□□□ -0.27
TPM1-215ENST00000558868 SCUBE1Q8IWY4 988 aa13.38□□□□□ -0.27
TPM1-215ENST00000558868 TBC1D21Q8IYX1 336 aa13.38□□□□□ -0.27
TPM1-215ENST00000558868 FAM9CQ8IZT9 166 aa13.38□□□□□ -0.27
TPM1-215ENST00000558868 FLCNQ8NFG4 579 aa13.38□□□□□ -0.27
TPM1-215ENST00000558868 OR5K2Q8NHB8 316 aa13.38□□□□□ -0.27
TPM1-215ENST00000558868 FAM174AQ8TBP5 190 aa13.38□□□□□ -0.27
TPM1-215ENST00000558868 ZNF480Q8WV37 535 aa13.38□□□□□ -0.27
TPM1-215ENST00000558868 SELENOMQ8WWX9 145 aa13.38□□□□□ -0.27
TPM1-215ENST00000558868 REPS1Q96D71 796 aa13.38□□□□□ -0.27
TPM1-215ENST00000558868 WDR92Q96MX6 357 aa13.38□□□□□ -0.27
TPM1-215ENST00000558868 OR2M4Q96R27 311 aa13.38□□□□□ -0.27
TPM1-215ENST00000558868 HAUS8Q9BT25 410 aa13.38□□□□□ -0.27
TPM1-215ENST00000558868 SGPP1Q9BX95 441 aa13.38□□□□□ -0.27
TPM1-215ENST00000558868 BRINP2Q9C0B6 783 aa13.38□□□□□ -0.27
TPM1-215ENST00000558868 LTB4R2Q9NPC1 389 aa13.38□□□□□ -0.27
TPM1-215ENST00000558868 FZD3Q9NPG1 666 aa13.38□□□□□ -0.27
TPM1-215ENST00000558868 CCDC177Q9NQR7 707 aaPredicted RBP13.38□□□□□ -0.27
TPM1-215ENST00000558868 NOP53Q9NZM5 478 aaKnown RBP13.38□□□□□ -0.27
TPM1-215ENST00000558868 ZIM2Q9NZV7 527 aa13.38□□□□□ -0.27
TPM1-215ENST00000558868 EBF1Q9UH73 591 aa13.38□□□□□ -0.27
TPM1-215ENST00000558868 PRPF19Q9UMS4 504 aaKnown RBP13.38□□□□□ -0.27
TPM1-215ENST00000558868 SUFUQ9UMX1 484 aa13.38□□□□□ -0.27
TPM1-215ENST00000558868 EIF3LQ9Y262 564 aaKnown RBP13.38□□□□□ -0.27
TPM1-215ENST00000558868 GPSM3Q9Y4H4 160 aa13.38□□□□□ -0.27
TPM1-215ENST00000558868 KCNE1BA0A087WTH5 132 aa13.37□□□□□ -0.27
TPM1-215ENST00000558868 DYTNA2CJ06 578 aa13.37□□□□□ -0.27
TPM1-215ENST00000558868 MEI4A8MW99 385 aa13.37□□□□□ -0.27
TPM1-215ENST00000558868 PRAMEF26H0Y7S4 382 aa13.37□□□□□ -0.27
TPM1-215ENST00000558868 AIM2O14862 343 aa13.37□□□□□ -0.27
TPM1-215ENST00000558868 LSM1O15116 133 aaKnown RBP13.37□□□□□ -0.27
TPM1-215ENST00000558868 WFS1O76024 890 aa13.37□□□□□ -0.27
TPM1-215ENST00000558868 HSD3B1P14060 373 aa13.37□□□□□ -0.27
TPM1-215ENST00000558868 ITGAXP20702 1163 aa13.37□□□□□ -0.27
TPM1-215ENST00000558868 HSD3B2P26439 372 aa13.37□□□□□ -0.27
TPM1-215ENST00000558868 GNPDA1P46926 289 aa13.37□□□□□ -0.27
TPM1-215ENST00000558868 NUDT2P50583 147 aa13.37□□□□□ -0.27
TPM1-215ENST00000558868 CLCNKAP51800 687 aa13.37□□□□□ -0.27
TPM1-215ENST00000558868 THOP1P52888 689 aa13.37□□□□□ -0.27
TPM1-215ENST00000558868 CSTF3Q12996 717 aaKnown RBP13.37□□□□□ -0.27
TPM1-215ENST00000558868 LAPTM5Q13571 262 aa13.37□□□□□ -0.27
TPM1-215ENST00000558868 LRP8Q14114 963 aa13.37□□□□□ -0.27
TPM1-215ENST00000558868 UBXN2BQ14CS0 331 aa13.37□□□□□ -0.27
TPM1-215ENST00000558868 CPSF6Q16630 551 aaKnown RBP eCLIP13.37□□□□□ -0.27
TPM1-215ENST00000558868 ZXDCQ2QGD7 858 aaPredicted RBP13.37□□□□□ -0.27
TPM1-215ENST00000558868 AP5B1Q2VPB7 878 aa13.37□□□□□ -0.27
TPM1-215ENST00000558868 CCSMST1Q4G0I0 132 aa13.37□□□□□ -0.27
TPM1-215ENST00000558868 PAGE2BQ5JRK9 111 aa13.37□□□□□ -0.27
TPM1-215ENST00000558868 CACHD1Q5VU97 1274 aa13.37□□□□□ -0.27
TPM1-215ENST00000558868 FRG2Q64ET8 278 aa13.37□□□□□ -0.27
TPM1-215ENST00000558868 CAPRIN2Q6IMN6 1127 aaKnown RBP13.37□□□□□ -0.27
TPM1-215ENST00000558868 GRHL2Q6ISB3 625 aa13.37□□□□□ -0.27
TPM1-215ENST00000558868 GK5Q6ZS86 529 aa13.37□□□□□ -0.27
TPM1-215ENST00000558868 SFRP1Q8N474 314 aa13.37□□□□□ -0.27
TPM1-215ENST00000558868 PCYOX1LQ8NBM8 494 aa13.37□□□□□ -0.27
TPM1-215ENST00000558868 OR2T11Q8NH01 316 aa13.37□□□□□ -0.27
TPM1-215ENST00000558868 RCN3Q96D15 328 aa13.37□□□□□ -0.27
TPM1-215ENST00000558868 FRG2BQ96QU4 278 aa13.37□□□□□ -0.27
TPM1-215ENST00000558868 SERPINI1Q99574 410 aa13.37□□□□□ -0.27
TPM1-215ENST00000558868 THTPAQ9BU02 230 aa13.37□□□□□ -0.27
TPM1-215ENST00000558868 RAB11FIP5Q9BXF6 653 aa13.37□□□□□ -0.27
TPM1-215ENST00000558868 PCBD2Q9H0N5 130 aa13.37□□□□□ -0.27
TPM1-215ENST00000558868 OSGEPL1Q9H4B0 414 aa13.37□□□□□ -0.27
TPM1-215ENST00000558868 MVB12BQ9H7P6 319 aa13.37□□□□□ -0.27
TPM1-215ENST00000558868 INTS7Q9NVH2 962 aaKnown RBP13.37□□□□□ -0.27
TPM1-215ENST00000558868 ASIC5Q9NY37 505 aa13.37□□□□□ -0.27
TPM1-215ENST00000558868 CCDC167Q9P0B6 97 aa13.37□□□□□ -0.27
TPM1-215ENST00000558868 NDUFAF1Q9Y375 327 aa13.37□□□□□ -0.27
TPM1-215ENST00000558868 PCDHGA11Q9Y5H2 935 aa13.37□□□□□ -0.27
TPM1-215ENST00000558868 PCYT1BQ9Y5K3 369 aaPredicted RBP13.37□□□□□ -0.27
TPM1-215ENST00000558868 GPR45Q9Y5Y3 372 aa13.37□□□□□ -0.27
TPM1-215ENST00000558868 HEBP2Q9Y5Z4 205 aa13.37□□□□□ -0.27
TPM1-215ENST00000558868 PRSS38A1L453 326 aa13.36□□□□□ -0.27
TPM1-215ENST00000558868 POM121BA6NF01 834 aa13.36□□□□□ -0.27
TPM1-215ENST00000558868 FAM170BA6NMN3 283 aa13.36□□□□□ -0.27
TPM1-215ENST00000558868 C10orf142B7Z368 130 aa13.36□□□□□ -0.27
TPM1-215ENST00000558868 NPIPB8E9PQR5 432 aa13.36□□□□□ -0.27
TPM1-215ENST00000558868 H0YIV9 168 aa13.36□□□□□ -0.27
TPM1-215ENST00000558868 RSL1D1O76021 490 aaKnown RBP13.36□□□□□ -0.27
TPM1-215ENST00000558868 SLC2A4P14672 509 aa13.36□□□□□ -0.27
TPM1-215ENST00000558868 PRPH2P23942 346 aa13.36□□□□□ -0.27
TPM1-215ENST00000558868 MAPK1P28482 360 aa13.36□□□□□ -0.27
TPM1-215ENST00000558868 CD6P30203 668 aa13.36□□□□□ -0.27
TPM1-215ENST00000558868 RABIFP47224 123 aa13.36□□□□□ -0.27
TPM1-215ENST00000558868 CLDN2P57739 230 aa13.36□□□□□ -0.27
TPM1-215ENST00000558868 TBPL1P62380 186 aa13.36□□□□□ -0.27
TPM1-215ENST00000558868 SLC25A3Q00325 362 aa13.36□□□□□ -0.27
TPM1-215ENST00000558868 CTBSQ01459 385 aa13.36□□□□□ -0.27
TPM1-215ENST00000558868 DOC2AQ14183 400 aa13.36□□□□□ -0.27
TPM1-215ENST00000558868 HIST2H2ACQ16777 129 aaPredicted RBP13.36□□□□□ -0.27
TPM1-215ENST00000558868 SGO1Q5FBB7 561 aa13.36□□□□□ -0.27
TPM1-215ENST00000558868 COQ5Q5HYK3 327 aa13.36□□□□□ -0.27
TPM1-215ENST00000558868 HIST2H2AA3Q6FI13 130 aa13.36□□□□□ -0.27
TPM1-215ENST00000558868 ANO7Q6IWH7 933 aa13.36□□□□□ -0.27
TPM1-215ENST00000558868 PAOXQ6QHF9 649 aa13.36□□□□□ -0.27
TPM1-215ENST00000558868 LCTLQ6UWM7 567 aa13.36□□□□□ -0.27
TPM1-215ENST00000558868 ENPP7Q6UWV6 458 aa13.36□□□□□ -0.27
TPM1-215ENST00000558868 HACD2Q6Y1H2 254 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms