RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 DPP6P42658 865 aa8.82□□□□□ -1
GTF2A1-203ENST00000553612 PDZK1IP1Q13113 114 aa8.82□□□□□ -1
GTF2A1-203ENST00000553612 IL17AQ16552 155 aa8.82□□□□□ -1
GTF2A1-203ENST00000553612 ZNF674Q2M3X9 581 aa8.82□□□□□ -1
GTF2A1-203ENST00000553612 FAM198BQ6UWH4 519 aa8.82□□□□□ -1
GTF2A1-203ENST00000553612 C3P1Q6ZMU1 363 aa8.82□□□□□ -1
GTF2A1-203ENST00000553612 EPHX4Q8IUS5 362 aa8.82□□□□□ -1
GTF2A1-203ENST00000553612 ZFPM1Q8IX07 1006 aa8.82□□□□□ -1
GTF2A1-203ENST00000553612 ZNF680Q8NEM1 530 aa8.82□□□□□ -1
GTF2A1-203ENST00000553612 TM9SF4Q92544 642 aa8.82□□□□□ -1
GTF2A1-203ENST00000553612 RPL3LQ92901 407 aaKnown RBP8.82□□□□□ -1
GTF2A1-203ENST00000553612 RAD51AP1Q96B01 352 aa8.82□□□□□ -1
GTF2A1-203ENST00000553612 FBXL18Q96ME1 805 aa8.82□□□□□ -1
GTF2A1-203ENST00000553612 RDH12Q96NR8 316 aa8.82□□□□□ -1
GTF2A1-203ENST00000553612 MENTQ9BUN1 341 aa8.82□□□□□ -1
GTF2A1-203ENST00000553612 RSRP1Q9BUV0 290 aa8.82□□□□□ -1
GTF2A1-203ENST00000553612 SEMA4CQ9C0C4 833 aa8.82□□□□□ -1
GTF2A1-203ENST00000553612 GHRLQ9UBU3 117 aa8.82□□□□□ -1
GTF2A1-203ENST00000553612 IKZF3Q9UKT9 509 aa8.82□□□□□ -1
GTF2A1-203ENST00000553612 RNF6Q9Y252 685 aa8.82□□□□□ -1
GTF2A1-203ENST00000553612 TVP23AA6NH52 213 aa8.82□□□□□ -1
GTF2A1-203ENST00000553612 CASKO14936 926 aa8.82□□□□□ -1
GTF2A1-203ENST00000553612 AP1G1O43747 822 aa8.82□□□□□ -1
GTF2A1-203ENST00000553612 REEP5Q00765 189 aa8.82□□□□□ -1
GTF2A1-203ENST00000553612 SKP2Q13309 424 aa8.82□□□□□ -1
GTF2A1-203ENST00000553612 NR6A1Q15406 480 aa8.82□□□□□ -1
GTF2A1-203ENST00000553612 OR7G2Q8NG99 324 aa8.82□□□□□ -1
GTF2A1-203ENST00000553612 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.82□□□□□ -17e-8■■■■□ 23.2
GTF2A1-203ENST00000553612 UBA3Q8TBC4 463 aa8.82□□□□□ -1
GTF2A1-203ENST00000553612 ULK4Q96C45 1275 aa8.82□□□□□ -1
GTF2A1-203ENST00000553612 ZNF649Q9BS31 505 aa8.82□□□□□ -1
GTF2A1-203ENST00000553612 TFB2MQ9H5Q4 396 aaKnown RBP8.82□□□□□ -1
GTF2A1-203ENST00000553612 MED14O60244 1454 aa8.81□□□□□ -1
GTF2A1-203ENST00000553612 PHOX2AO14813 284 aa8.81□□□□□ -1
GTF2A1-203ENST00000553612 IPO13O94829 963 aaKnown RBP8.81□□□□□ -1
GTF2A1-203ENST00000553612 DIRAS3O95661 229 aa8.81□□□□□ -1
GTF2A1-203ENST00000553612 OLFM2O95897 454 aa8.81□□□□□ -1
GTF2A1-203ENST00000553612 QDPRP09417 244 aa8.81□□□□□ -1
GTF2A1-203ENST00000553612 SLC7A1P30825 629 aa8.81□□□□□ -1
GTF2A1-203ENST00000553612 SPRP35270 261 aaPredicted RBP8.81□□□□□ -1
GTF2A1-203ENST00000553612 HTR3AP46098 478 aa8.81□□□□□ -1
GTF2A1-203ENST00000553612 HLCSP50747 726 aa8.81□□□□□ -1
GTF2A1-203ENST00000553612 MEF2AQ02078 507 aaPredicted RBP8.81□□□□□ -1
GTF2A1-203ENST00000553612 EXOSC2Q13868 293 aaKnown RBP8.81□□□□□ -1
GTF2A1-203ENST00000553612 ZNF648Q5T619 568 aaPredicted RBP8.81□□□□□ -1
GTF2A1-203ENST00000553612 NXNL2Q5VZ03 156 aa8.81□□□□□ -1
GTF2A1-203ENST00000553612 SLC25A25Q6KCM7 469 aa8.81□□□□□ -1
GTF2A1-203ENST00000553612 CBWD2Q8IUF1 395 aa8.81□□□□□ -1
GTF2A1-203ENST00000553612 RASGEF1CQ8N431 466 aa8.81□□□□□ -1
GTF2A1-203ENST00000553612 VGLL2Q8N8G2 317 aa8.81□□□□□ -1
GTF2A1-203ENST00000553612 OR9A2Q8NGT5 310 aa8.81□□□□□ -1
GTF2A1-203ENST00000553612 FRS2Q8WU20 508 aa8.81□□□□□ -1
GTF2A1-203ENST00000553612 ACOT12Q8WYK0 555 aa8.81□□□□□ -1
GTF2A1-203ENST00000553612 SPSB2Q99619 263 aa8.81□□□□□ -1
GTF2A1-203ENST00000553612 XPNPEP3Q9NQH7 507 aa8.81□□□□□ -1
GTF2A1-203ENST00000553612 MAFBQ9Y5Q3 323 aaPredicted RBP8.81□□□□□ -1
GTF2A1-203ENST00000553612 ERI2A8K979 691 aaKnown RBP8.81□□□□□ -1
GTF2A1-203ENST00000553612 RAD1O60671 282 aa8.81□□□□□ -1
GTF2A1-203ENST00000553612 VPS4BO75351 444 aa8.81□□□□□ -1
GTF2A1-203ENST00000553612 MTX2O75431 263 aa8.81□□□□□ -1
GTF2A1-203ENST00000553612 EIF3GO75821 320 aaKnown RBP eCLIP8.81□□□□□ -1
GTF2A1-203ENST00000553612 VEGFAP15692 232 aaPredicted RBP8.81□□□□□ -1
GTF2A1-203ENST00000553612 GADD45AP24522 165 aa8.81□□□□□ -1
GTF2A1-203ENST00000553612 PTBP1P26599 531 aaKnown RBP eCLIP8.81□□□□□ -17e-21■■□□□ 14
GTF2A1-203ENST00000553612 SLC12A3P55017 1021 aa8.81□□□□□ -1
GTF2A1-203ENST00000553612 GPR176Q14439 515 aa8.81□□□□□ -1
GTF2A1-203ENST00000553612 ATXN7L3Q14CW9 347 aaPredicted RBP8.81□□□□□ -1
GTF2A1-203ENST00000553612 LRP11Q86VZ4 500 aa8.81□□□□□ -1
GTF2A1-203ENST00000553612 PROSER1Q86XN7 944 aa8.81□□□□□ -1
GTF2A1-203ENST00000553612 SLC35F3Q8IY50 421 aa8.81□□□□□ -1
GTF2A1-203ENST00000553612 OR6F1Q8NGZ6 308 aa8.81□□□□□ -1
GTF2A1-203ENST00000553612 TFB1MQ8WVM0 346 aaKnown RBP8.81□□□□□ -1
GTF2A1-203ENST00000553612 RXFP2Q8WXD0 754 aa8.81□□□□□ -1
GTF2A1-203ENST00000553612 TFAP2BQ92481 460 aa8.81□□□□□ -1
GTF2A1-203ENST00000553612 SLC7A6Q92536 515 aa8.81□□□□□ -1
GTF2A1-203ENST00000553612 COMMD9Q9P000 198 aa8.81□□□□□ -1
GTF2A1-203ENST00000553612 NPATQ14207 1427 aa8.81□□□□□ -1
GTF2A1-203ENST00000553612 UBE2QL1A1L167 161 aa8.81□□□□□ -1
GTF2A1-203ENST00000553612 GPR37O15354 613 aa8.81□□□□□ -1
GTF2A1-203ENST00000553612 MMP20O60882 483 aa8.81□□□□□ -1
GTF2A1-203ENST00000553612 PRKACGP22612 351 aa8.81□□□□□ -1
GTF2A1-203ENST00000553612 TGFBR1P36897 503 aa8.81□□□□□ -1
GTF2A1-203ENST00000553612 CTSKP43235 329 aa8.81□□□□□ -1
GTF2A1-203ENST00000553612 CCR6P51684 374 aa8.81□□□□□ -1
GTF2A1-203ENST00000553612 KCNC4Q03721 635 aa8.81□□□□□ -1
GTF2A1-203ENST00000553612 TCEAL1Q15170 157 aa8.81□□□□□ -1
GTF2A1-203ENST00000553612 PLEKHN1Q494U1 663 aaPredicted RBP8.81□□□□□ -1
GTF2A1-203ENST00000553612 PCID2Q5JVF3 399 aa8.81□□□□□ -1
GTF2A1-203ENST00000553612 NXPE4Q6UWF7 544 aa8.81□□□□□ -1
GTF2A1-203ENST00000553612 GPALPP1Q8IXQ4 340 aa8.81□□□□□ -1
GTF2A1-203ENST00000553612 GPD1LQ8N335 351 aa8.81□□□□□ -1
GTF2A1-203ENST00000553612 COQ8BQ96D53 544 aa8.81□□□□□ -1
GTF2A1-203ENST00000553612 RNF157Q96PX1 679 aa8.81□□□□□ -1
GTF2A1-203ENST00000553612 SLC25A23Q9BV35 468 aa8.81□□□□□ -1
GTF2A1-203ENST00000553612 LYARQ9NX58 379 aaKnown RBP8.81□□□□□ -1
GTF2A1-203ENST00000553612 GPRC5BQ9NZH0 403 aa8.81□□□□□ -1
GTF2A1-203ENST00000553612 BFARQ9NZS9 450 aa8.81□□□□□ -1
GTF2A1-203ENST00000553612 FLRT1Q9NZU1 646 aa8.81□□□□□ -1
GTF2A1-203ENST00000553612 PLXNC1O60486 1568 aa8.81□□□□□ -1
GTF2A1-203ENST00000553612 MAGEB2O15479 319 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms