RNA–Protein interactions for RNA: ENST00000431742.2

CSTF3-202, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 2 BASIC

Gene CSTF3, Length 715 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-202ENST00000431742 HNRNPLLQ8WVV9 542 aaKnown RBP13.9□□□□□ -0.18
CSTF3-202ENST00000431742 KLHL6Q8WZ60 621 aa13.9□□□□□ -0.18
CSTF3-202ENST00000431742 SMPDL3AQ92484 453 aa13.9□□□□□ -0.18
CSTF3-202ENST00000431742 NXNL1Q96CM4 212 aa13.9□□□□□ -0.18
CSTF3-202ENST00000431742 SLC41A2Q96JW4 573 aa13.9□□□□□ -0.18
CSTF3-202ENST00000431742 PPM1MQ96MI6 270 aa13.9□□□□□ -0.18
CSTF3-202ENST00000431742 MAP3K3Q99759 626 aa13.9□□□□□ -0.18
CSTF3-202ENST00000431742 TMEM109Q9BVC6 243 aa13.9□□□□□ -0.18
CSTF3-202ENST00000431742 TRIM54Q9BYV2 358 aa13.9□□□□□ -0.18
CSTF3-202ENST00000431742 NMRAL1Q9HBL8 299 aa13.9□□□□□ -0.18
CSTF3-202ENST00000431742 C1GALT1Q9NS00 363 aa13.9□□□□□ -0.18
CSTF3-202ENST00000431742 KLHL3Q9UH77 587 aa13.9□□□□□ -0.18
CSTF3-202ENST00000431742 TBK1Q9UHD2 729 aa13.9□□□□□ -0.18
CSTF3-202ENST00000431742 MSRB2Q9Y3D2 182 aa13.9□□□□□ -0.18
CSTF3-202ENST00000431742 WDFY3Q8IZQ1 3526 aa13.9□□□□□ -0.18
CSTF3-202ENST00000431742 FKBP9O95302 570 aa13.89□□□□□ -0.19
CSTF3-202ENST00000431742 HIST1H2AGP0C0S8 130 aaPredicted RBP13.89□□□□□ -0.19
CSTF3-202ENST00000431742 COL6A2P12110 1019 aa13.89□□□□□ -0.19
CSTF3-202ENST00000431742 TFEBP19484 476 aa13.89□□□□□ -0.19
CSTF3-202ENST00000431742 HIST1H2ADP20671 130 aa13.89□□□□□ -0.19
CSTF3-202ENST00000431742 OAS2P29728 719 aaKnown RBP13.89□□□□□ -0.19
CSTF3-202ENST00000431742 FAM83EQ2M2I3 478 aa13.89□□□□□ -0.19
CSTF3-202ENST00000431742 BEND6Q5SZJ8 279 aaPredicted RBP13.89□□□□□ -0.19
CSTF3-202ENST00000431742 CACHD1Q5VU97 1274 aa13.89□□□□□ -0.19
CSTF3-202ENST00000431742 FBXO38Q6PIJ6 1188 aa13.89□□□□□ -0.19
CSTF3-202ENST00000431742 AGTRAPQ6RW13 159 aa13.89□□□□□ -0.19
CSTF3-202ENST00000431742 KMT5CQ86Y97 462 aa13.89□□□□□ -0.19
CSTF3-202ENST00000431742 IQCKQ8N0W5 287 aa13.89□□□□□ -0.19
CSTF3-202ENST00000431742 CYP4X1Q8N118 509 aa13.89□□□□□ -0.19
CSTF3-202ENST00000431742 PLD6Q8N2A8 252 aaKnown RBP13.89□□□□□ -0.19
CSTF3-202ENST00000431742 C2orf73Q8N5S3 287 aaPredicted RBP13.89□□□□□ -0.19
CSTF3-202ENST00000431742 BMPERQ8N8U9 685 aa13.89□□□□□ -0.19
CSTF3-202ENST00000431742 OR2A1Q8NGT9 310 aa13.89□□□□□ -0.19
CSTF3-202ENST00000431742 WDR36Q8NI36 951 aaKnown RBP13.89□□□□□ -0.19
CSTF3-202ENST00000431742 ACMSDQ8TDX5 336 aa13.89□□□□□ -0.19
CSTF3-202ENST00000431742 SLC22A18Q96BI1 424 aa13.89□□□□□ -0.19
CSTF3-202ENST00000431742 FBXL8Q96CD0 374 aa13.89□□□□□ -0.19
CSTF3-202ENST00000431742 CABS1Q96KC9 395 aa13.89□□□□□ -0.19
CSTF3-202ENST00000431742 HIST1H2AHQ96KK5 128 aa13.89□□□□□ -0.19
CSTF3-202ENST00000431742 ATOH8Q96SQ7 321 aa13.89□□□□□ -0.19
CSTF3-202ENST00000431742 HIST1H2AJQ99878 128 aa13.89□□□□□ -0.19
CSTF3-202ENST00000431742 H2AFJQ9BTM1 129 aa13.89□□□□□ -0.19
CSTF3-202ENST00000431742 ROPN1BQ9BZX4 212 aaPredicted RBP13.89□□□□□ -0.19
CSTF3-202ENST00000431742 VPS11Q9H270 941 aa13.89□□□□□ -0.19
CSTF3-202ENST00000431742 ALG9Q9H6U8 611 aa13.89□□□□□ -0.19
CSTF3-202ENST00000431742 ROPN1Q9HAT0 212 aaPredicted RBP13.89□□□□□ -0.19
CSTF3-202ENST00000431742 SIDT1Q9NXL6 827 aaKnown RBP13.89□□□□□ -0.19
CSTF3-202ENST00000431742 ARL15Q9NXU5 204 aa13.89□□□□□ -0.19
CSTF3-202ENST00000431742 UTP6Q9NYH9 597 aaKnown RBP13.89□□□□□ -0.19
CSTF3-202ENST00000431742 LGALS13Q9UHV8 139 aa13.89□□□□□ -0.19
CSTF3-202ENST00000431742 PLAAQ9Y263 795 aa13.89□□□□□ -0.19
CSTF3-202ENST00000431742 BTRCQ9Y297 605 aa13.89□□□□□ -0.19
CSTF3-202ENST00000431742 CHD8Q9HCK8 2581 aa13.88□□□□□ -0.19
CSTF3-202ENST00000431742 A0A0J9YY10 115 aa13.88□□□□□ -0.19
CSTF3-202ENST00000431742 PMS2P1A4D2B8 440 aa13.88□□□□□ -0.19
CSTF3-202ENST00000431742 SMIM23A6NLE4 172 aa13.88□□□□□ -0.19
CSTF3-202ENST00000431742 A8MU76 341 aa13.88□□□□□ -0.19
CSTF3-202ENST00000431742 ISM1B1AKI9 464 aa13.88□□□□□ -0.19
CSTF3-202ENST00000431742 KERAO60938 352 aa13.88□□□□□ -0.19
CSTF3-202ENST00000431742 RASSF9O75901 435 aa13.88□□□□□ -0.19
CSTF3-202ENST00000431742 ST6GAL1P15907 406 aa13.88□□□□□ -0.19
CSTF3-202ENST00000431742 NELFEP18615 380 aaKnown RBP13.88□□□□□ -0.19
CSTF3-202ENST00000431742 PSMB5P28074 263 aa13.88□□□□□ -0.19
CSTF3-202ENST00000431742 KCNC1P48547 511 aa13.88□□□□□ -0.19
CSTF3-202ENST00000431742 TBPL1P62380 186 aa13.88□□□□□ -0.19
CSTF3-202ENST00000431742 ZNF844Q08AG5 666 aa13.88□□□□□ -0.19
CSTF3-202ENST00000431742 ACAP2Q15057 778 aa13.88□□□□□ -0.19
CSTF3-202ENST00000431742 TGFBIQ15582 683 aa13.88□□□□□ -0.19
CSTF3-202ENST00000431742 TECRLQ5HYJ1 363 aa13.88□□□□□ -0.19
CSTF3-202ENST00000431742 CDKL4Q5MAI5 379 aa13.88□□□□□ -0.19
CSTF3-202ENST00000431742 SH2D5Q6ZV89 423 aa13.88□□□□□ -0.19
CSTF3-202ENST00000431742 FRA10AC1Q70Z53 315 aa13.88□□□□□ -0.19
CSTF3-202ENST00000431742 RAB11FIP2Q7L804 512 aa13.88□□□□□ -0.19
CSTF3-202ENST00000431742 TRIM73Q86UV7 250 aa13.88□□□□□ -0.19
CSTF3-202ENST00000431742 SYTL1Q8IYJ3 562 aa13.88□□□□□ -0.19
CSTF3-202ENST00000431742 PDPRQ8NCN5 879 aa13.88□□□□□ -0.19
CSTF3-202ENST00000431742 PPFIBP2Q8ND30 876 aa13.88□□□□□ -0.19
CSTF3-202ENST00000431742 AGBL5Q8NDL9 886 aa13.88□□□□□ -0.19
CSTF3-202ENST00000431742 OR56A3Q8NH54 315 aa13.88□□□□□ -0.19
CSTF3-202ENST00000431742 RHEBL1Q8TAI7 183 aa13.88□□□□□ -0.19
CSTF3-202ENST00000431742 PRR11Q96HE9 360 aaPredicted RBP13.88□□□□□ -0.19
CSTF3-202ENST00000431742 TRAPPC9Q96Q05 1148 aa13.88□□□□□ -0.19
CSTF3-202ENST00000431742 CMKLR1Q99788 373 aa13.88□□□□□ -0.19
CSTF3-202ENST00000431742 SGPP1Q9BX95 441 aa13.88□□□□□ -0.19
CSTF3-202ENST00000431742 NRSN2Q9GZP1 204 aa13.88□□□□□ -0.19
CSTF3-202ENST00000431742 CHRNA10Q9GZZ6 450 aa13.88□□□□□ -0.19
CSTF3-202ENST00000431742 LOXL2Q9Y4K0 774 aa13.88□□□□□ -0.19
CSTF3-202ENST00000431742 PCDHGA8Q9Y5G5 932 aa13.88□□□□□ -0.19
CSTF3-202ENST00000431742 KLK4Q9Y5K2 254 aa13.88□□□□□ -0.19
CSTF3-202ENST00000431742 PABPN1LA6NDY0 278 aaKnown RBP13.87□□□□□ -0.19
CSTF3-202ENST00000431742 SLC9B1P1A6NJY1 282 aa13.87□□□□□ -0.19
CSTF3-202ENST00000431742 ZBTB11O95625 1053 aaPredicted RBP13.87□□□□□ -0.19
CSTF3-202ENST00000431742 GUCA1CO95843 209 aa13.87□□□□□ -0.19
CSTF3-202ENST00000431742 PVRP15151 417 aa13.87□□□□□ -0.19
CSTF3-202ENST00000431742 CDH3P22223 829 aa13.87□□□□□ -0.19
CSTF3-202ENST00000431742 CSTF2P33240 577 aaKnown RBP eCLIP13.87□□□□□ -0.19
CSTF3-202ENST00000431742 GLRBP48167 497 aa13.87□□□□□ -0.19
CSTF3-202ENST00000431742 HNMTP50135 292 aa13.87□□□□□ -0.19
CSTF3-202ENST00000431742 IFFO1Q0D2I5 559 aa13.87□□□□□ -0.19
CSTF3-202ENST00000431742 RTP5Q14D33 572 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 252.5 ms