RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 CARM1Q86X55 608 aa14.78□□□□□ -0.04
SCAMP4-202ENST00000409472 RASGEF1AQ8N9B8 481 aa14.78□□□□□ -0.04
SCAMP4-202ENST00000409472 SELENOMQ8WWX9 145 aa14.78□□□□□ -0.04
SCAMP4-202ENST00000409472 TBC1D14Q9P2M4 693 aa14.78□□□□□ -0.04
SCAMP4-202ENST00000409472 EIF3LQ9Y262 564 aaKnown RBP14.78□□□□□ -0.04
SCAMP4-202ENST00000409472 C2orf16Q68DN1 1984 aa14.77□□□□□ -0.04
SCAMP4-202ENST00000409472 ATG2AQ2TAZ0 1938 aa14.77□□□□□ -0.04
SCAMP4-202ENST00000409472 GRXCR1A8MXD5 290 aa14.77□□□□□ -0.04
SCAMP4-202ENST00000409472 PRRT4C9JH25 899 aa14.77□□□□□ -0.04
SCAMP4-202ENST00000409472 GFYI3L273 518 aa14.77□□□□□ -0.04
SCAMP4-202ENST00000409472 SLC28A1O00337 649 aa14.77□□□□□ -0.04
SCAMP4-202ENST00000409472 ZNF30P17039 623 aa14.77□□□□□ -0.04
SCAMP4-202ENST00000409472 PBLDP30039 288 aaPredicted RBP14.77□□□□□ -0.04
SCAMP4-202ENST00000409472 MMP12P39900 470 aa14.77□□□□□ -0.04
SCAMP4-202ENST00000409472 BDKRB1P46663 353 aa14.77□□□□□ -0.04
SCAMP4-202ENST00000409472 DGKGP49619 791 aa14.77□□□□□ -0.04
SCAMP4-202ENST00000409472 ABRQ12979 859 aa14.77□□□□□ -0.04
SCAMP4-202ENST00000409472 PWP1Q13610 501 aa14.77□□□□□ -0.04
SCAMP4-202ENST00000409472 DMC1Q14565 340 aa14.77□□□□□ -0.04
SCAMP4-202ENST00000409472 NHSL2Q5HYW2 709 aa14.77□□□□□ -0.04
SCAMP4-202ENST00000409472 ANKRD46Q86W74 232 aa14.77□□□□□ -0.04
SCAMP4-202ENST00000409472 PHACTR4Q8IZ21 702 aa14.77□□□□□ -0.04
SCAMP4-202ENST00000409472 DDHD1Q8NEL9 900 aa14.77□□□□□ -0.04
SCAMP4-202ENST00000409472 ZFP28Q8NHY6 868 aa14.77□□□□□ -0.04
SCAMP4-202ENST00000409472 APIPQ96GX9 242 aa14.77□□□□□ -0.04
SCAMP4-202ENST00000409472 EGLN2Q96KS0 407 aa14.77□□□□□ -0.04
SCAMP4-202ENST00000409472 TSSK3Q96PN8 268 aa14.77□□□□□ -0.04
SCAMP4-202ENST00000409472 DPY30Q9C005 99 aa14.77□□□□□ -0.04
SCAMP4-202ENST00000409472 CLMPQ9H6B4 373 aa14.77□□□□□ -0.04
SCAMP4-202ENST00000409472 C1orf109Q9NX04 203 aa14.77□□□□□ -0.04
SCAMP4-202ENST00000409472 MRPS23Q9Y3D9 190 aaKnown RBP14.77□□□□□ -0.04
SCAMP4-202ENST00000409472 TSPAN11A1L157 253 aa14.77□□□□□ -0.05
SCAMP4-202ENST00000409472 K7ESM1 405 aa14.77□□□□□ -0.05
SCAMP4-202ENST00000409472 ACOX3O15254 700 aa14.77□□□□□ -0.05
SCAMP4-202ENST00000409472 LRATO95237 230 aa14.77□□□□□ -0.05
SCAMP4-202ENST00000409472 TNFAIP8O95379 198 aa14.77□□□□□ -0.05
SCAMP4-202ENST00000409472 PGRP06401 933 aa14.77□□□□□ -0.05
SCAMP4-202ENST00000409472 C8GP07360 202 aa14.77□□□□□ -0.05
SCAMP4-202ENST00000409472 FAM58BPP0C7Q3 252 aa14.77□□□□□ -0.05
SCAMP4-202ENST00000409472 CYP2A6P11509 494 aaPredicted RBP14.77□□□□□ -0.05
SCAMP4-202ENST00000409472 HTR1EP28566 365 aa14.77□□□□□ -0.05
SCAMP4-202ENST00000409472 SLC6A11P48066 632 aa14.77□□□□□ -0.05
SCAMP4-202ENST00000409472 HSPA13P48723 471 aa14.77□□□□□ -0.05
SCAMP4-202ENST00000409472 PFN3P60673 137 aa14.77□□□□□ -0.05
SCAMP4-202ENST00000409472 RELAQ04206 551 aa14.77□□□□□ -0.05
SCAMP4-202ENST00000409472 PPIGQ13427 754 aaKnown RBP eCLIP14.77□□□□□ -0.055e-11■□□□□ 9.3
SCAMP4-202ENST00000409472 SF1Q15637 639 aaKnown RBP14.77□□□□□ -0.05
SCAMP4-202ENST00000409472 IRAK1BP1Q5VVH5 260 aa14.77□□□□□ -0.05
SCAMP4-202ENST00000409472 PPP4R4Q6NUP7 873 aa14.77□□□□□ -0.05
SCAMP4-202ENST00000409472 LRRC70Q7Z2Q7 622 aa14.77□□□□□ -0.05
SCAMP4-202ENST00000409472 NANOGNBQ7Z5D8 188 aa14.77□□□□□ -0.05
SCAMP4-202ENST00000409472 TECPR1Q7Z6L1 1165 aa14.77□□□□□ -0.05
SCAMP4-202ENST00000409472 TRPV3Q8NET8 790 aa14.77□□□□□ -0.05
SCAMP4-202ENST00000409472 VN1R2Q8NFZ6 395 aa14.77□□□□□ -0.05
SCAMP4-202ENST00000409472 ZNF583Q96ND8 569 aa14.77□□□□□ -0.05
SCAMP4-202ENST00000409472 GRIP2Q9C0E4 1043 aa14.77□□□□□ -0.05
SCAMP4-202ENST00000409472 SOX17Q9H6I2 414 aaPredicted RBP14.77□□□□□ -0.05
SCAMP4-202ENST00000409472 HPS4Q9NQG7 708 aa14.77□□□□□ -0.05
SCAMP4-202ENST00000409472 UTS2RQ9UKP6 389 aa14.77□□□□□ -0.05
SCAMP4-202ENST00000409472 PPT2Q9UMR5 302 aa14.77□□□□□ -0.05
SCAMP4-202ENST00000409472 NUP214P35658 2090 aaPredicted RBP14.77□□□□□ -0.05
SCAMP4-202ENST00000409472 IFRD1O00458 451 aaPredicted RBP14.76□□□□□ -0.05
SCAMP4-202ENST00000409472 KPNA3O00505 521 aaPredicted RBP14.76□□□□□ -0.05
SCAMP4-202ENST00000409472 EI24O14681 340 aa14.76□□□□□ -0.05
SCAMP4-202ENST00000409472 TULP3O75386 442 aa14.76□□□□□ -0.05
SCAMP4-202ENST00000409472 CLIC3O95833 236 aa14.76□□□□□ -0.05
SCAMP4-202ENST00000409472 ADH5P11766 374 aa14.76□□□□□ -0.05
SCAMP4-202ENST00000409472 IL10P22301 178 aa14.76□□□□□ -0.05
SCAMP4-202ENST00000409472 DCDC1P59894 354 aa14.76□□□□□ -0.05
SCAMP4-202ENST00000409472 ZNF805Q5CZA5 627 aa14.76□□□□□ -0.05
SCAMP4-202ENST00000409472 PLEKHS1Q5SXH7 462 aa14.76□□□□□ -0.05
SCAMP4-202ENST00000409472 GLYATQ6IB77 296 aa14.76□□□□□ -0.05
SCAMP4-202ENST00000409472 TMC5Q6UXY8 1006 aa14.76□□□□□ -0.05
SCAMP4-202ENST00000409472 ERI1Q8IV48 349 aaKnown RBP14.76□□□□□ -0.05
SCAMP4-202ENST00000409472 SCAIQ8N9R8 606 aa14.76□□□□□ -0.05
SCAMP4-202ENST00000409472 OR10A6Q8NH74 314 aa14.76□□□□□ -0.05
SCAMP4-202ENST00000409472 EBPLQ9BY08 206 aa14.76□□□□□ -0.05
SCAMP4-202ENST00000409472 SLC29A3Q9BZD2 475 aa14.76□□□□□ -0.05
SCAMP4-202ENST00000409472 KLHL42Q9P2K6 505 aa14.76□□□□□ -0.05
SCAMP4-202ENST00000409472 GULP1Q9UBP9 304 aa14.76□□□□□ -0.05
SCAMP4-202ENST00000409472 ANAPC2Q9UJX6 822 aa14.76□□□□□ -0.05
SCAMP4-202ENST00000409472 COL4A3Q01955 1670 aa14.76□□□□□ -0.05
SCAMP4-202ENST00000409472 NUP210Q8TEM1 1887 aaPredicted RBP14.76□□□□□ -0.05
SCAMP4-202ENST00000409472 XYLBO75191 536 aa14.76□□□□□ -0.05
SCAMP4-202ENST00000409472 KCNH1O95259 989 aa14.76□□□□□ -0.05
SCAMP4-202ENST00000409472 FGF19O95750 216 aa14.76□□□□□ -0.05
SCAMP4-202ENST00000409472 GSNP06396 782 aa14.76□□□□□ -0.05
SCAMP4-202ENST00000409472 GPIP06744 558 aa14.76□□□□□ -0.05
SCAMP4-202ENST00000409472 HIST1H2AGP0C0S8 130 aaPredicted RBP14.76□□□□□ -0.05
SCAMP4-202ENST00000409472 PCNAP12004 261 aa14.76□□□□□ -0.05
SCAMP4-202ENST00000409472 SDC1P18827 310 aa14.76□□□□□ -0.05
SCAMP4-202ENST00000409472 HIST1H2ADP20671 130 aa14.76□□□□□ -0.05
SCAMP4-202ENST00000409472 FASP25445 335 aa14.76□□□□□ -0.05
SCAMP4-202ENST00000409472 PDHA2P29803 388 aa14.76□□□□□ -0.05
SCAMP4-202ENST00000409472 TXNL4AP83876 142 aaKnown RBP14.76□□□□□ -0.05
SCAMP4-202ENST00000409472 ACOX1Q15067 660 aa14.76□□□□□ -0.05
SCAMP4-202ENST00000409472 ATP6AP1Q15904 470 aa14.76□□□□□ -0.05
SCAMP4-202ENST00000409472 BCL2A1Q16548 175 aa14.76□□□□□ -0.05
SCAMP4-202ENST00000409472 NKG7Q16617 165 aa14.76□□□□□ -0.05
SCAMP4-202ENST00000409472 ZDHHC20Q5W0Z9 365 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms