RNA–Protein interactions for RNA: ENST00000381753.8

LIMCH1-202, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-202ENST00000381753 FAM149AA5PLN7 773 aa8.98□□□□□ -0.97
LIMCH1-202ENST00000381753 KIAA0513O60268 411 aa8.98□□□□□ -0.97
LIMCH1-202ENST00000381753 WBP4O75554 376 aaKnown RBP8.98□□□□□ -0.97
LIMCH1-202ENST00000381753 KLHL2O95198 593 aa8.98□□□□□ -0.97
LIMCH1-202ENST00000381753 PGLSO95336 258 aa8.98□□□□□ -0.97
LIMCH1-202ENST00000381753 AHSA1O95433 338 aa8.98□□□□□ -0.97
LIMCH1-202ENST00000381753 LATS1O95835 1130 aa8.98□□□□□ -0.97
LIMCH1-202ENST00000381753 RPSAP08865 295 aaKnown RBP8.98□□□□□ -0.97
LIMCH1-202ENST00000381753 CCZ1BP86790 482 aa8.98□□□□□ -0.97
LIMCH1-202ENST00000381753 CCZ1P86791 482 aaPredicted RBP8.98□□□□□ -0.97
LIMCH1-202ENST00000381753 CTBP1Q13363 440 aa8.98□□□□□ -0.97
LIMCH1-202ENST00000381753 STPG1Q5TH74 334 aa8.98□□□□□ -0.97
LIMCH1-202ENST00000381753 AGAP7PQ5VUJ5 663 aa8.98□□□□□ -0.97
LIMCH1-202ENST00000381753 HMBOX1Q6NT76 420 aa8.98□□□□□ -0.97
LIMCH1-202ENST00000381753 HFE2Q6ZVN8 426 aa8.98□□□□□ -0.97
LIMCH1-202ENST00000381753 TAS1R1Q7RTX1 841 aa8.98□□□□□ -0.97
LIMCH1-202ENST00000381753 ADGRD2Q7Z7M1 963 aa8.98□□□□□ -0.97
LIMCH1-202ENST00000381753 PLD3Q8IV08 490 aa8.98□□□□□ -0.97
LIMCH1-202ENST00000381753 AGAP4Q96P64 663 aa8.98□□□□□ -0.97
LIMCH1-202ENST00000381753 PANX1Q96RD7 426 aa8.98□□□□□ -0.97
LIMCH1-202ENST00000381753 SOX17Q9H6I2 414 aaPredicted RBP8.98□□□□□ -0.97
LIMCH1-202ENST00000381753 MEAF6Q9HAF1 191 aa8.98□□□□□ -0.97
LIMCH1-202ENST00000381753 OBP2AQ9NY56 170 aa8.98□□□□□ -0.97
LIMCH1-202ENST00000381753 TBX21Q9UL17 535 aa8.98□□□□□ -0.97
LIMCH1-202ENST00000381753 LOC102723532A0A0G2JNH3 316 aa8.98□□□□□ -0.97
LIMCH1-202ENST00000381753 SAP18O00422 153 aaKnown RBP8.98□□□□□ -0.97
LIMCH1-202ENST00000381753 RGS20O76081 388 aa8.98□□□□□ -0.97
LIMCH1-202ENST00000381753 F10P00742 488 aa8.98□□□□□ -0.97
LIMCH1-202ENST00000381753 ANXA4P09525 319 aaPredicted RBP8.98□□□□□ -0.97
LIMCH1-202ENST00000381753 IL7RP16871 459 aa8.98□□□□□ -0.97
LIMCH1-202ENST00000381753 CSNK2A2P19784 350 aaPredicted RBP8.98□□□□□ -0.97
LIMCH1-202ENST00000381753 TGFBR3Q03167 851 aa8.98□□□□□ -0.97
LIMCH1-202ENST00000381753 IL10RAQ13651 578 aa8.98□□□□□ -0.97
LIMCH1-202ENST00000381753 SFRP1Q8N474 314 aa8.98□□□□□ -0.97
LIMCH1-202ENST00000381753 CMTM5Q96DZ9 223 aa8.98□□□□□ -0.97
LIMCH1-202ENST00000381753 ERGIC2Q96RQ1 377 aa8.98□□□□□ -0.97
LIMCH1-202ENST00000381753 NPLQ9BXD5 320 aaPredicted RBP8.98□□□□□ -0.97
LIMCH1-202ENST00000381753 ZBTB20Q9HC78 741 aaPredicted RBP8.98□□□□□ -0.97
LIMCH1-202ENST00000381753 ENOPH1Q9UHY7 261 aa8.98□□□□□ -0.97
LIMCH1-202ENST00000381753 SLCO3A1Q9UIG8 710 aa8.98□□□□□ -0.97
LIMCH1-202ENST00000381753 ZNF490Q9ULM2 529 aaPredicted RBP8.98□□□□□ -0.97
LIMCH1-202ENST00000381753 MED31Q9Y3C7 131 aa8.98□□□□□ -0.97
LIMCH1-202ENST00000381753 BTNL10A8MVZ5 291 aa8.98□□□□□ -0.97
LIMCH1-202ENST00000381753 BTN3A3O00478 584 aa8.98□□□□□ -0.97
LIMCH1-202ENST00000381753 CLDN9O95484 217 aa8.98□□□□□ -0.97
LIMCH1-202ENST00000381753 HSD11B1P28845 292 aa8.98□□□□□ -0.97
LIMCH1-202ENST00000381753 SERPINB5P36952 375 aa8.98□□□□□ -0.97
LIMCH1-202ENST00000381753 PTGER3P43115 390 aa8.98□□□□□ -0.97
LIMCH1-202ENST00000381753 CLRN1P58418 232 aa8.98□□□□□ -0.97
LIMCH1-202ENST00000381753 ID2Q02363 134 aa8.98□□□□□ -0.97
LIMCH1-202ENST00000381753 NAB1Q13506 487 aa8.98□□□□□ -0.97
LIMCH1-202ENST00000381753 CCDC153Q494R4 210 aa8.98□□□□□ -0.97
LIMCH1-202ENST00000381753 OSTM1Q86WC4 334 aa8.98□□□□□ -0.97
LIMCH1-202ENST00000381753 ZNF227Q86WZ6 799 aa8.98□□□□□ -0.97
LIMCH1-202ENST00000381753 NAXDQ8IW45 347 aa8.98□□□□□ -0.97
LIMCH1-202ENST00000381753 RXFP1Q9HBX9 757 aa8.98□□□□□ -0.97
LIMCH1-202ENST00000381753 CA5BQ9Y2D0 317 aa8.98□□□□□ -0.97
LIMCH1-202ENST00000381753 IGKV6D-41A0A0C4DH26 115 aa8.98□□□□□ -0.97
LIMCH1-202ENST00000381753 STMND1H3BQB6 276 aa8.98□□□□□ -0.97
LIMCH1-202ENST00000381753 PAPSS1O43252 624 aaPredicted RBP8.98□□□□□ -0.97
LIMCH1-202ENST00000381753 ATP8B1O43520 1251 aa8.98□□□□□ -0.97
LIMCH1-202ENST00000381753 HSPA13P48723 471 aa8.98□□□□□ -0.97
LIMCH1-202ENST00000381753 CACNA2D1P54289 1103 aa8.98□□□□□ -0.97
LIMCH1-202ENST00000381753 DLX2Q07687 328 aaPredicted RBP8.98□□□□□ -0.97
LIMCH1-202ENST00000381753 ZNF783Q6ZMS7 281 aa8.98□□□□□ -0.97
LIMCH1-202ENST00000381753 GPR180Q86V85 440 aa8.98□□□□□ -0.97
LIMCH1-202ENST00000381753 XYLT1Q86Y38 959 aa8.98□□□□□ -0.97
LIMCH1-202ENST00000381753 KATNAL2Q8IYT4 538 aa8.98□□□□□ -0.97
LIMCH1-202ENST00000381753 RMND5BQ96G75 393 aaPredicted RBP8.98□□□□□ -0.97
LIMCH1-202ENST00000381753 P2RY11Q96G91 374 aa8.98□□□□□ -0.97
LIMCH1-202ENST00000381753 APOLD1Q96LR9 279 aa8.98□□□□□ -0.97
LIMCH1-202ENST00000381753 TBATAQ96M53 351 aa8.98□□□□□ -0.97
LIMCH1-202ENST00000381753 VRK1Q99986 396 aaPredicted RBP8.98□□□□□ -0.97
LIMCH1-202ENST00000381753 ING3Q9NXR8 418 aa8.98□□□□□ -0.97
LIMCH1-202ENST00000381753 LUZP4Q9P127 313 aa8.98□□□□□ -0.97
LIMCH1-202ENST00000381753 TRIM64BA6NI03 449 aa8.97□□□□□ -0.97
LIMCH1-202ENST00000381753 KCNJ13O60928 360 aa8.97□□□□□ -0.97
LIMCH1-202ENST00000381753 STC2O76061 302 aa8.97□□□□□ -0.97
LIMCH1-202ENST00000381753 PAHP00439 452 aa8.97□□□□□ -0.97
LIMCH1-202ENST00000381753 LPLP06858 475 aa8.97□□□□□ -0.97
LIMCH1-202ENST00000381753 PSMA4P25789 261 aaKnown RBP8.97□□□□□ -0.97
LIMCH1-202ENST00000381753 ENTPD1P49961 510 aa8.97□□□□□ -0.97
LIMCH1-202ENST00000381753 MAGOHP61326 146 aaKnown RBP8.97□□□□□ -0.97
LIMCH1-202ENST00000381753 JAG1P78504 1218 aa8.97□□□□□ -0.97
LIMCH1-202ENST00000381753 PDE7AQ13946 482 aa8.97□□□□□ -0.97
LIMCH1-202ENST00000381753 SLBPQ14493 270 aaKnown RBP eCLIP8.97□□□□□ -0.97
LIMCH1-202ENST00000381753 GK5Q6ZS86 529 aa8.97□□□□□ -0.97
LIMCH1-202ENST00000381753 DTX3LQ8TDB6 740 aa8.97□□□□□ -0.97
LIMCH1-202ENST00000381753 SLC38A2Q96QD8 506 aa8.97□□□□□ -0.97
LIMCH1-202ENST00000381753 SLC39A3Q9BRY0 314 aa8.97□□□□□ -0.97
LIMCH1-202ENST00000381753 DOHHQ9BU89 302 aa8.97□□□□□ -0.97
LIMCH1-202ENST00000381753 SLC46A2Q9BY10 475 aa8.97□□□□□ -0.97
LIMCH1-202ENST00000381753 OCEL1Q9H607 264 aa8.97□□□□□ -0.97
LIMCH1-202ENST00000381753 ASB6Q9NWX5 421 aa8.97□□□□□ -0.97
LIMCH1-202ENST00000381753 RCOR3Q9P2K3 495 aaPredicted RBP8.97□□□□□ -0.97
LIMCH1-202ENST00000381753 COL3A1P02461 1466 aaPredicted RBP8.97□□□□□ -0.97
LIMCH1-202ENST00000381753 PDPK1O15530 556 aa8.97□□□□□ -0.97
LIMCH1-202ENST00000381753 CRYABP02511 175 aaKnown RBP8.97□□□□□ -0.97
LIMCH1-202ENST00000381753 ASMTP46597 345 aa8.97□□□□□ -0.97
LIMCH1-202ENST00000381753 UNC5AQ6ZN44 842 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms