RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 CLDN2P57739 230 aa17.6■□□□□ 0.41
VIM-201ENST00000224237 MAD2L1Q13257 205 aaPredicted RBP17.6■□□□□ 0.41
VIM-201ENST00000224237 FZD5Q13467 585 aa17.6■□□□□ 0.41
VIM-201ENST00000224237 NFATC4Q14934 902 aa17.6■□□□□ 0.41
VIM-201ENST00000224237 AP5B1Q2VPB7 878 aa17.6■□□□□ 0.41
VIM-201ENST00000224237 PDCD4Q53EL6 469 aaKnown RBP17.6■□□□□ 0.41
VIM-201ENST00000224237 ANO7Q6IWH7 933 aa17.6■□□□□ 0.41
VIM-201ENST00000224237 SCUBE1Q8IWY4 988 aa17.6■□□□□ 0.41
VIM-201ENST00000224237 DEFB107AQ8IZN7 70 aa17.6■□□□□ 0.41
VIM-201ENST00000224237 OR5AR1Q8NGP9 310 aa17.6■□□□□ 0.41
VIM-201ENST00000224237 MAFAQ8NHW3 353 aaPredicted RBP17.6■□□□□ 0.41
VIM-201ENST00000224237 SHDQ96IW2 340 aa17.6■□□□□ 0.41
VIM-201ENST00000224237 MRPL1Q9BYD6 325 aaKnown RBP17.6■□□□□ 0.41
VIM-201ENST00000224237 OSGEPL1Q9H4B0 414 aa17.6■□□□□ 0.41
VIM-201ENST00000224237 LTB4R2Q9NPC1 389 aa17.6■□□□□ 0.41
VIM-201ENST00000224237 MRPL40Q9NQ50 206 aaKnown RBP17.6■□□□□ 0.41
VIM-201ENST00000224237 WNT16Q9UBV4 365 aa17.6■□□□□ 0.41
VIM-201ENST00000224237 PRSS38A1L453 326 aa17.59■□□□□ 0.41
VIM-201ENST00000224237 C10orf142B7Z368 130 aa17.59■□□□□ 0.41
VIM-201ENST00000224237 PRAMEF4O60810 478 aa17.59■□□□□ 0.41
VIM-201ENST00000224237 ATP6V1G2O95670 118 aa17.59■□□□□ 0.41
VIM-201ENST00000224237 RPL10P27635 214 aaKnown RBP17.59■□□□□ 0.41
VIM-201ENST00000224237 HTR1BP28222 390 aa17.59■□□□□ 0.41
VIM-201ENST00000224237 CLCNKAP51800 687 aa17.59■□□□□ 0.41
VIM-201ENST00000224237 PNLIPRP1P54315 467 aa17.59■□□□□ 0.41
VIM-201ENST00000224237 ZNF33BQ06732 778 aa17.59■□□□□ 0.41
VIM-201ENST00000224237 ART3Q13508 389 aa17.59■□□□□ 0.41
VIM-201ENST00000224237 MMEL1Q495T6 779 aa17.59■□□□□ 0.41
VIM-201ENST00000224237 XKR6Q5GH73 641 aa17.59■□□□□ 0.41
VIM-201ENST00000224237 PRAMEF9Q5VWM5 478 aa17.59■□□□□ 0.41
VIM-201ENST00000224237 CAPRIN2Q6IMN6 1127 aaKnown RBP17.59■□□□□ 0.41
VIM-201ENST00000224237 FUNDC1Q8IVP5 155 aa17.59■□□□□ 0.41
VIM-201ENST00000224237 ULK2Q8IYT8 1036 aa17.59■□□□□ 0.41
VIM-201ENST00000224237 DSELQ8IZU8 1212 aa17.59■□□□□ 0.41
VIM-201ENST00000224237 SIX5Q8N196 739 aa17.59■□□□□ 0.41
VIM-201ENST00000224237 TSTD1Q8NFU3 115 aa17.59■□□□□ 0.41
VIM-201ENST00000224237 HHIPQ96QV1 700 aa17.59■□□□□ 0.41
VIM-201ENST00000224237 C1orf50Q9BV19 199 aa17.59■□□□□ 0.41
VIM-201ENST00000224237 SGPP1Q9BX95 441 aa17.59■□□□□ 0.41
VIM-201ENST00000224237 TRIT1Q9H3H1 467 aaKnown RBP17.59■□□□□ 0.41
VIM-201ENST00000224237 FGF22Q9HCT0 170 aa17.59■□□□□ 0.41
VIM-201ENST00000224237 TMEM45AQ9NWC5 275 aa17.59■□□□□ 0.41
VIM-201ENST00000224237 NOP53Q9NZM5 478 aaKnown RBP17.59■□□□□ 0.41
VIM-201ENST00000224237 GPSM3Q9Y4H4 160 aa17.59■□□□□ 0.41
VIM-201ENST00000224237 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.59■□□□□ 0.41
VIM-201ENST00000224237 BBIP1A8MTZ0 92 aa17.58■□□□□ 0.41
VIM-201ENST00000224237 E7ENX8 843 aa17.58■□□□□ 0.41
VIM-201ENST00000224237 PDYNP01213 254 aa17.58■□□□□ 0.41
VIM-201ENST00000224237 CCND1P24385 295 aa17.58■□□□□ 0.41
VIM-201ENST00000224237 OXTRP30559 389 aa17.58■□□□□ 0.41
VIM-201ENST00000224237 HNF4AP41235 474 aa17.58■□□□□ 0.41
VIM-201ENST00000224237 GNPDA1P46926 289 aa17.58■□□□□ 0.41
VIM-201ENST00000224237 STARD6P59095 220 aa17.58■□□□□ 0.41
VIM-201ENST00000224237 TAP2Q03519 686 aa17.58■□□□□ 0.41
VIM-201ENST00000224237 SGO1Q5FBB7 561 aa17.58■□□□□ 0.41
VIM-201ENST00000224237 FRG2Q64ET8 278 aa17.58■□□□□ 0.41
VIM-201ENST00000224237 GRHL2Q6ISB3 625 aa17.58■□□□□ 0.41
VIM-201ENST00000224237 LRRC56Q8IYG6 542 aaPredicted RBP17.58■□□□□ 0.41
VIM-201ENST00000224237 TBC1D21Q8IYX1 336 aa17.58■□□□□ 0.41
VIM-201ENST00000224237 RGL4Q8IZJ4 473 aa17.58■□□□□ 0.41
VIM-201ENST00000224237 BMFQ96LC9 184 aa17.58■□□□□ 0.41
VIM-201ENST00000224237 FRG2BQ96QU4 278 aa17.58■□□□□ 0.41
VIM-201ENST00000224237 CCDC177Q9NQR7 707 aaPredicted RBP17.58■□□□□ 0.41
VIM-201ENST00000224237 ZIM2Q9NZV7 527 aa17.58■□□□□ 0.41
VIM-201ENST00000224237 CYP8B1Q9UNU6 501 aa17.58■□□□□ 0.41
VIM-201ENST00000224237 KCNK6Q9Y257 313 aa17.58■□□□□ 0.41
VIM-201ENST00000224237 SERTM1A2A2V5 107 aa17.58■□□□□ 0.4
VIM-201ENST00000224237 PRR19A6NJB7 356 aa17.58■□□□□ 0.4
VIM-201ENST00000224237 H0Y8X5 98 aa17.58■□□□□ 0.4
VIM-201ENST00000224237 PI15O43692 258 aa17.58■□□□□ 0.4
VIM-201ENST00000224237 APBB3O95704 486 aa17.58■□□□□ 0.4
VIM-201ENST00000224237 HSD17B2P37059 387 aa17.58■□□□□ 0.4
VIM-201ENST00000224237 NME5P56597 212 aa17.58■□□□□ 0.4
VIM-201ENST00000224237 YPEL5P62699 121 aa17.58■□□□□ 0.4
VIM-201ENST00000224237 HMGCS1Q01581 520 aa17.58■□□□□ 0.4
VIM-201ENST00000224237 TBL3Q12788 808 aaKnown RBP17.58■□□□□ 0.4
VIM-201ENST00000224237 E2F2Q14209 437 aa17.58■□□□□ 0.4
VIM-201ENST00000224237 ARHGAP19Q14CB8 494 aa17.58■□□□□ 0.4
VIM-201ENST00000224237 RFTN2Q52LD8 501 aaPredicted RBP17.58■□□□□ 0.4
VIM-201ENST00000224237 WASHC2DQ5SRD0 308 aa17.58■□□□□ 0.4
VIM-201ENST00000224237 REP15Q6BDI9 236 aa17.58■□□□□ 0.4
VIM-201ENST00000224237 PGAM4Q8N0Y7 254 aa17.58■□□□□ 0.4
VIM-201ENST00000224237 PHC3Q8NDX5 983 aa17.58■□□□□ 0.4
VIM-201ENST00000224237 WDR92Q96MX6 357 aa17.58■□□□□ 0.4
VIM-201ENST00000224237 OR2M4Q96R27 311 aa17.58■□□□□ 0.4
VIM-201ENST00000224237 NPAS2Q99743 824 aa17.58■□□□□ 0.4
VIM-201ENST00000224237 ACPTQ9BZG2 426 aa17.58■□□□□ 0.4
VIM-201ENST00000224237 CARS2Q9HA77 564 aaKnown RBP17.58■□□□□ 0.4
VIM-201ENST00000224237 BAIAP2L1Q9UHR4 511 aa17.58■□□□□ 0.4
VIM-201ENST00000224237 TDRKHQ9Y2W6 561 aaKnown RBP17.58■□□□□ 0.4
VIM-201ENST00000224237 DYRK1BQ9Y463 629 aa17.58■□□□□ 0.4
VIM-201ENST00000224237 HS3ST3A1Q9Y663 406 aa17.58■□□□□ 0.4
VIM-201ENST00000224237 A0A088AWK7 358 aa17.57■□□□□ 0.4
VIM-201ENST00000224237 FAM170BA6NMN3 283 aa17.57■□□□□ 0.4
VIM-201ENST00000224237 TOR1BO14657 336 aa17.57■□□□□ 0.4
VIM-201ENST00000224237 NRP2O60462 931 aa17.57■□□□□ 0.4
VIM-201ENST00000224237 RSL1D1O76021 490 aaKnown RBP17.57■□□□□ 0.4
VIM-201ENST00000224237 ERGP11308 486 aa17.57■□□□□ 0.4
VIM-201ENST00000224237 IDSP22304 550 aa17.57■□□□□ 0.4
VIM-201ENST00000224237 CASP2P42575 452 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms