RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 STK38LQ9Y2H1 464 aa14.31□□□□□ -0.12
SHKBP1-211ENST00000595945 ATXN2Q99700 1313 aaKnown RBP14.31□□□□□ -0.12
SHKBP1-211ENST00000595945 RALGAPA1Q6GYQ0 2036 aa14.31□□□□□ -0.12
SHKBP1-211ENST00000595945 MUC3AQ02505 3323 aa14.3□□□□□ -0.12
SHKBP1-211ENST00000595945 MATN2O00339 956 aa14.3□□□□□ -0.12
SHKBP1-211ENST00000595945 WDR47O94967 919 aa14.3□□□□□ -0.12
SHKBP1-211ENST00000595945 ESRRBO95718 433 aa14.3□□□□□ -0.12
SHKBP1-211ENST00000595945 GNSP15586 552 aa14.3□□□□□ -0.12
SHKBP1-211ENST00000595945 NDUFS1P28331 727 aa14.3□□□□□ -0.12
SHKBP1-211ENST00000595945 HSD17B2P37059 387 aa14.3□□□□□ -0.12
SHKBP1-211ENST00000595945 SLC19A1P41440 591 aa14.3□□□□□ -0.12
SHKBP1-211ENST00000595945 PNLIPRP1P54315 467 aa14.3□□□□□ -0.12
SHKBP1-211ENST00000595945 C21orf59P57076 290 aa14.3□□□□□ -0.12
SHKBP1-211ENST00000595945 PCDH1Q08174 1060 aa14.3□□□□□ -0.12
SHKBP1-211ENST00000595945 C1orf61Q13536 156 aa14.3□□□□□ -0.12
SHKBP1-211ENST00000595945 NAE1Q13564 534 aa14.3□□□□□ -0.12
SHKBP1-211ENST00000595945 ELOCQ15369 112 aa14.3□□□□□ -0.12
SHKBP1-211ENST00000595945 TCEA2Q15560 299 aa14.3□□□□□ -0.12
SHKBP1-211ENST00000595945 PRRT3Q5FWE3 981 aa14.3□□□□□ -0.12
SHKBP1-211ENST00000595945 CEP68Q76N32 757 aa14.3□□□□□ -0.12
SHKBP1-211ENST00000595945 TAF8Q7Z7C8 310 aa14.3□□□□□ -0.12
SHKBP1-211ENST00000595945 SYVN1Q86TM6 617 aa14.3□□□□□ -0.12
SHKBP1-211ENST00000595945 KIRREL3Q8IZU9 778 aa14.3□□□□□ -0.12
SHKBP1-211ENST00000595945 SEC16BQ96JE7 1060 aa14.3□□□□□ -0.12
SHKBP1-211ENST00000595945 IL17FQ96PD4 163 aa14.3□□□□□ -0.12
SHKBP1-211ENST00000595945 SIKE1Q9BRV8 207 aa14.3□□□□□ -0.12
SHKBP1-211ENST00000595945 NTMT1Q9BV86 223 aa14.3□□□□□ -0.12
SHKBP1-211ENST00000595945 TWSG1Q9GZX9 223 aa14.3□□□□□ -0.12
SHKBP1-211ENST00000595945 KIR3DX1Q9H7L2 352 aa14.3□□□□□ -0.12
SHKBP1-211ENST00000595945 NOL11Q9H8H0 719 aaKnown RBP14.3□□□□□ -0.12
SHKBP1-211ENST00000595945 IPPKQ9H8X2 491 aa14.3□□□□□ -0.12
SHKBP1-211ENST00000595945 NPHS2Q9NP85 383 aa14.3□□□□□ -0.12
SHKBP1-211ENST00000595945 INTS7Q9NVH2 962 aaKnown RBP14.3□□□□□ -0.12
SHKBP1-211ENST00000595945 MARCOQ9UEW3 520 aaPredicted RBP14.3□□□□□ -0.12
SHKBP1-211ENST00000595945 PLAGL1Q9UM63 463 aa14.3□□□□□ -0.12
SHKBP1-211ENST00000595945 TDRKHQ9Y2W6 561 aaKnown RBP14.3□□□□□ -0.12
SHKBP1-211ENST00000595945 PCDHGA2Q9Y5H1 932 aa14.3□□□□□ -0.12
SHKBP1-211ENST00000595945 USH1CQ9Y6N9 552 aa14.3□□□□□ -0.12
SHKBP1-211ENST00000595945 PRAMEF33A0A0G2JMD5 474 aa14.29□□□□□ -0.12
SHKBP1-211ENST00000595945 OR5K4A6NMS3 321 aa14.29□□□□□ -0.12
SHKBP1-211ENST00000595945 E7ENX8 843 aa14.29□□□□□ -0.12
SHKBP1-211ENST00000595945 SLCO1B7G3V0H7 640 aa14.29□□□□□ -0.12
SHKBP1-211ENST00000595945 TNFRSF10AO00220 468 aa14.29□□□□□ -0.12
SHKBP1-211ENST00000595945 AZIN1O14977 448 aa14.29□□□□□ -0.12
SHKBP1-211ENST00000595945 KITP10721 976 aa14.29□□□□□ -0.12
SHKBP1-211ENST00000595945 EPB42P16452 691 aa14.29□□□□□ -0.12
SHKBP1-211ENST00000595945 XRCC1P18887 633 aaPredicted RBP14.29□□□□□ -0.12
SHKBP1-211ENST00000595945 PRDX3P30048 256 aaKnown RBP14.29□□□□□ -0.12
SHKBP1-211ENST00000595945 PKLRP30613 574 aa14.29□□□□□ -0.12
SHKBP1-211ENST00000595945 HOXD12P35452 270 aa14.29□□□□□ -0.12
SHKBP1-211ENST00000595945 NUBP1P53384 320 aa14.29□□□□□ -0.12
SHKBP1-211ENST00000595945 HNRNPKP61978 463 aaKnown RBP eCLIP14.29□□□□□ -0.12
SHKBP1-211ENST00000595945 UBE2IP63279 158 aaKnown RBP14.29□□□□□ -0.12
SHKBP1-211ENST00000595945 TAP2Q03519 686 aa14.29□□□□□ -0.12
SHKBP1-211ENST00000595945 PRKG2Q13237 762 aa14.29□□□□□ -0.12
SHKBP1-211ENST00000595945 RBBP7Q16576 425 aa14.29□□□□□ -0.12
SHKBP1-211ENST00000595945 KIF19Q2TAC6 998 aa14.29□□□□□ -0.12
SHKBP1-211ENST00000595945 UGT3A2Q3SY77 523 aa14.29□□□□□ -0.12
SHKBP1-211ENST00000595945 SH2D4BQ5SQS7 431 aa14.29□□□□□ -0.12
SHKBP1-211ENST00000595945 GKAP1Q5VSY0 366 aaPredicted RBP14.29□□□□□ -0.12
SHKBP1-211ENST00000595945 KANK2Q63ZY3 851 aa14.29□□□□□ -0.12
SHKBP1-211ENST00000595945 GPRIN3Q6ZVF9 776 aa14.29□□□□□ -0.12
SHKBP1-211ENST00000595945 THOC6Q86W42 341 aaKnown RBP14.29□□□□□ -0.12
SHKBP1-211ENST00000595945 SYT12Q8IV01 421 aa14.29□□□□□ -0.12
SHKBP1-211ENST00000595945 WDR75Q8IWA0 830 aaKnown RBP14.29□□□□□ -0.12
SHKBP1-211ENST00000595945 NAGSQ8N159 534 aa14.29□□□□□ -0.12
SHKBP1-211ENST00000595945 SDR16C5Q8N3Y7 309 aa14.29□□□□□ -0.12
SHKBP1-211ENST00000595945 OR52B6Q8NGF0 335 aa14.29□□□□□ -0.12
SHKBP1-211ENST00000595945 HMGCLL1Q8TB92 370 aa14.29□□□□□ -0.12
SHKBP1-211ENST00000595945 MAPK15Q8TD08 544 aa14.29□□□□□ -0.12
SHKBP1-211ENST00000595945 ZFPM2Q8WW38 1151 aa14.29□□□□□ -0.12
SHKBP1-211ENST00000595945 STON2Q8WXE9 905 aa14.29□□□□□ -0.12
SHKBP1-211ENST00000595945 PYCR2Q96C36 320 aa14.29□□□□□ -0.12
SHKBP1-211ENST00000595945 THOC1Q96FV9 657 aaKnown RBP14.29□□□□□ -0.12
SHKBP1-211ENST00000595945 FAR2Q96K12 515 aa14.29□□□□□ -0.12
SHKBP1-211ENST00000595945 OR4K3Q96R72 315 aa14.29□□□□□ -0.12
SHKBP1-211ENST00000595945 MID1IP1Q9NPA3 183 aa14.29□□□□□ -0.12
SHKBP1-211ENST00000595945 KCNK4Q9NYG8 393 aa14.29□□□□□ -0.12
SHKBP1-211ENST00000595945 SPASTQ9UBP0 616 aa14.29□□□□□ -0.12
SHKBP1-211ENST00000595945 VTI1BQ9UEU0 232 aa14.29□□□□□ -0.12
SHKBP1-211ENST00000595945 SLC22A14Q9Y267 594 aa14.29□□□□□ -0.12
SHKBP1-211ENST00000595945 TRAF6Q9Y4K3 522 aa14.29□□□□□ -0.12
SHKBP1-211ENST00000595945 ANGPTL3Q9Y5C1 460 aa14.29□□□□□ -0.12
SHKBP1-211ENST00000595945 COLEC10Q9Y6Z7 277 aa14.29□□□□□ -0.12
SHKBP1-211ENST00000595945 MDC1Q14676 2089 aaKnown RBP14.29□□□□□ -0.12
SHKBP1-211ENST00000595945 ASXL3Q9C0F0 2248 aa14.29□□□□□ -0.12
SHKBP1-211ENST00000595945 KIR2DS5A0A0G2JLQ3 304 aa14.28□□□□□ -0.12
SHKBP1-211ENST00000595945 A0A0G2JNG1 304 aa14.28□□□□□ -0.12
SHKBP1-211ENST00000595945 FAM86C2PA6NEL3 165 aa14.28□□□□□ -0.12
SHKBP1-211ENST00000595945 ZNF839A8K0R7 811 aa14.28□□□□□ -0.12
SHKBP1-211ENST00000595945 TMEM233B4DJY2 109 aa14.28□□□□□ -0.12
SHKBP1-211ENST00000595945 KIR2DS3K7RE56 304 aa14.28□□□□□ -0.12
SHKBP1-211ENST00000595945 HDAC3O15379 428 aa14.28□□□□□ -0.12
SHKBP1-211ENST00000595945 GALR2O43603 387 aaPredicted RBP14.28□□□□□ -0.12
SHKBP1-211ENST00000595945 PRAMEF4O60810 478 aa14.28□□□□□ -0.12
SHKBP1-211ENST00000595945 PIAS2O75928 621 aa14.28□□□□□ -0.12
SHKBP1-211ENST00000595945 OTCP00480 354 aa14.28□□□□□ -0.12
SHKBP1-211ENST00000595945 SLC2A4P14672 509 aa14.28□□□□□ -0.12
SHKBP1-211ENST00000595945 DPP6P42658 865 aa14.28□□□□□ -0.12
SHKBP1-211ENST00000595945 RXRGP48443 463 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms