RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 ATL1Q8WXF7 558 aa17.65■□□□□ 0.42
SMPD3-211ENST00000568373 EME1Q96AY2 570 aa17.65■□□□□ 0.42
SMPD3-211ENST00000568373 CCDC138Q96M89 665 aa17.65■□□□□ 0.42
SMPD3-211ENST00000568373 PPM1MQ96MI6 270 aa17.65■□□□□ 0.42
SMPD3-211ENST00000568373 CGREF1Q99674 301 aa17.65■□□□□ 0.42
SMPD3-211ENST00000568373 ZCCHC2Q9C0B9 1178 aaKnown RBP17.65■□□□□ 0.42
SMPD3-211ENST00000568373 SEMA6AQ9H2E6 1030 aa17.65■□□□□ 0.42
SMPD3-211ENST00000568373 CLMPQ9H6B4 373 aa17.65■□□□□ 0.42
SMPD3-211ENST00000568373 DYRK4Q9NR20 520 aa17.65■□□□□ 0.42
SMPD3-211ENST00000568373 DPPA5A6NC42 116 aa17.64■□□□□ 0.41
SMPD3-211ENST00000568373 TXNDC9O14530 226 aa17.64■□□□□ 0.41
SMPD3-211ENST00000568373 UGDHO60701 494 aa17.64■□□□□ 0.41
SMPD3-211ENST00000568373 IL6P05231 212 aa17.64■□□□□ 0.41
SMPD3-211ENST00000568373 HTR1EP28566 365 aa17.64■□□□□ 0.41
SMPD3-211ENST00000568373 OPRD1P41143 372 aa17.64■□□□□ 0.41
SMPD3-211ENST00000568373 HALP42357 657 aa17.64■□□□□ 0.41
SMPD3-211ENST00000568373 CHIT1Q13231 466 aa17.64■□□□□ 0.41
SMPD3-211ENST00000568373 FXNQ16595 210 aa17.64■□□□□ 0.41
SMPD3-211ENST00000568373 ZNF658BQ4V348 819 aaPredicted RBP17.64■□□□□ 0.41
SMPD3-211ENST00000568373 BCL7AQ4VC05 210 aa17.64■□□□□ 0.41
SMPD3-211ENST00000568373 FRG2Q64ET8 278 aa17.64■□□□□ 0.41
SMPD3-211ENST00000568373 CPA6Q8N4T0 437 aa17.64■□□□□ 0.41
SMPD3-211ENST00000568373 FRG2BQ96QU4 278 aa17.64■□□□□ 0.41
SMPD3-211ENST00000568373 CXorf56Q9H5V9 222 aa17.64■□□□□ 0.41
SMPD3-211ENST00000568373 STOX2Q9P2F5 926 aaPredicted RBP17.64■□□□□ 0.41
SMPD3-211ENST00000568373 GULP1Q9UBP9 304 aa17.64■□□□□ 0.41
SMPD3-211ENST00000568373 RAB26Q9ULW5 256 aa17.64■□□□□ 0.41
SMPD3-211ENST00000568373 REV3LO60673 3130 aa17.64■□□□□ 0.41
SMPD3-211ENST00000568373 NPIPB8E9PQR5 432 aa17.63■□□□□ 0.41
SMPD3-211ENST00000568373 DENRO43583 198 aaKnown RBP17.63■□□□□ 0.41
SMPD3-211ENST00000568373 LZTS3O60299 673 aaPredicted RBP17.63■□□□□ 0.41
SMPD3-211ENST00000568373 MMP20O60882 483 aa17.63■□□□□ 0.41
SMPD3-211ENST00000568373 TIPRLO75663 272 aa17.63■□□□□ 0.41
SMPD3-211ENST00000568373 KCNH1O95259 989 aa17.63■□□□□ 0.41
SMPD3-211ENST00000568373 JUPP14923 745 aa17.63■□□□□ 0.41
SMPD3-211ENST00000568373 PSMA4P25789 261 aaKnown RBP17.63■□□□□ 0.41
SMPD3-211ENST00000568373 PBLDP30039 288 aaPredicted RBP17.63■□□□□ 0.41
SMPD3-211ENST00000568373 GPR1P46091 355 aa17.63■□□□□ 0.41
SMPD3-211ENST00000568373 HSPA13P48723 471 aa17.63■□□□□ 0.41
SMPD3-211ENST00000568373 DPTQ07507 201 aa17.63■□□□□ 0.41
SMPD3-211ENST00000568373 FCHO2Q0JRZ9 810 aa17.63■□□□□ 0.41
SMPD3-211ENST00000568373 MTX3Q5HYI7 312 aa17.63■□□□□ 0.41
SMPD3-211ENST00000568373 LIPJQ5W064 366 aa17.63■□□□□ 0.41
SMPD3-211ENST00000568373 RAET1GQ6H3X3 334 aa17.63■□□□□ 0.41
SMPD3-211ENST00000568373 HMBOX1Q6NT76 420 aa17.63■□□□□ 0.41
SMPD3-211ENST00000568373 ERN2Q76MJ5 926 aaKnown RBP17.63■□□□□ 0.41
SMPD3-211ENST00000568373 TRIM74Q86UV6 250 aa17.63■□□□□ 0.41
SMPD3-211ENST00000568373 THOC6Q86W42 341 aaKnown RBP17.63■□□□□ 0.41
SMPD3-211ENST00000568373 KRTCAP2Q8N6L1 136 aa17.63■□□□□ 0.41
SMPD3-211ENST00000568373 SUSD6Q92537 303 aa17.63■□□□□ 0.41
SMPD3-211ENST00000568373 FOXJ1Q92949 421 aa17.63■□□□□ 0.41
SMPD3-211ENST00000568373 PPWD1Q96BP3 646 aaKnown RBP17.63■□□□□ 0.41
SMPD3-211ENST00000568373 FOPNLQ96NB1 174 aa17.63■□□□□ 0.41
SMPD3-211ENST00000568373 CDCA3Q99618 268 aaPredicted RBP17.63■□□□□ 0.41
SMPD3-211ENST00000568373 Q9H521 79 aa17.63■□□□□ 0.41
SMPD3-211ENST00000568373 AURKCQ9UQB9 309 aa17.63■□□□□ 0.41
SMPD3-211ENST00000568373 NEUROG3Q9Y4Z2 214 aa17.63■□□□□ 0.41
SMPD3-211ENST00000568373 DENND4AQ7Z401 1863 aa17.63■□□□□ 0.41
SMPD3-211ENST00000568373 SERTM1A2A2V5 107 aa17.63■□□□□ 0.41
SMPD3-211ENST00000568373 PGRP06401 933 aa17.63■□□□□ 0.41
SMPD3-211ENST00000568373 ZNF26P17031 533 aaPredicted RBP17.63■□□□□ 0.41
SMPD3-211ENST00000568373 PDHA2P29803 388 aa17.63■□□□□ 0.41
SMPD3-211ENST00000568373 IL12RB1P42701 662 aa17.63■□□□□ 0.41
SMPD3-211ENST00000568373 BDKRB1P46663 353 aa17.63■□□□□ 0.41
SMPD3-211ENST00000568373 IRF8Q02556 426 aa17.63■□□□□ 0.41
SMPD3-211ENST00000568373 RUNX3Q13761 415 aa17.63■□□□□ 0.41
SMPD3-211ENST00000568373 MAPKAPK3Q16644 382 aa17.63■□□□□ 0.41
SMPD3-211ENST00000568373 PLA2G4EQ3MJ16 856 aa17.63■□□□□ 0.41
SMPD3-211ENST00000568373 CCSMST1Q4G0I0 132 aa17.63■□□□□ 0.41
SMPD3-211ENST00000568373 TMEM52BQ4KMG9 183 aa17.63■□□□□ 0.41
SMPD3-211ENST00000568373 AASDHQ4L235 1098 aaPredicted RBP17.63■□□□□ 0.41
SMPD3-211ENST00000568373 SPANXN4Q5MJ08 99 aa17.63■□□□□ 0.41
SMPD3-211ENST00000568373 TBCELQ5QJ74 424 aa17.63■□□□□ 0.41
SMPD3-211ENST00000568373 AGTRAPQ6RW13 159 aa17.63■□□□□ 0.41
SMPD3-211ENST00000568373 ERMP1Q7Z2K6 904 aa17.63■□□□□ 0.41
SMPD3-211ENST00000568373 DSG4Q86SJ6 1040 aa17.63■□□□□ 0.41
SMPD3-211ENST00000568373 MMAAQ8IVH4 418 aaKnown RBP17.63■□□□□ 0.41
SMPD3-211ENST00000568373 KLHDC8AQ8IYD2 350 aa17.63■□□□□ 0.41
SMPD3-211ENST00000568373 GALNT4Q8N4A0 578 aa17.63■□□□□ 0.41
SMPD3-211ENST00000568373 OR8J3Q8NGG0 315 aa17.63■□□□□ 0.41
SMPD3-211ENST00000568373 GTF2H4Q92759 462 aa17.63■□□□□ 0.41
SMPD3-211ENST00000568373 CMTM7Q96FZ5 175 aa17.63■□□□□ 0.41
SMPD3-211ENST00000568373 OR2AG1Q9H205 316 aa17.63■□□□□ 0.41
SMPD3-211ENST00000568373 IGFLR1Q9H665 355 aa17.63■□□□□ 0.41
SMPD3-211ENST00000568373 DLGAP4Q9Y2H0 992 aa17.63■□□□□ 0.41
SMPD3-211ENST00000568373 DOCK8Q8NF50 2099 aa17.62■□□□□ 0.41
SMPD3-211ENST00000568373 H3BM21 787 aa17.62■□□□□ 0.41
SMPD3-211ENST00000568373 HNRNPRO43390 633 aaKnown RBP17.62■□□□□ 0.41
SMPD3-211ENST00000568373 AKAP10O43572 662 aa17.62■□□□□ 0.41
SMPD3-211ENST00000568373 LILRB5O75023 590 aa17.62■□□□□ 0.41
SMPD3-211ENST00000568373 GPIP06744 558 aa17.62■□□□□ 0.41
SMPD3-211ENST00000568373 MTHFD1P11586 935 aaKnown RBP17.62■□□□□ 0.41
SMPD3-211ENST00000568373 IL10P22301 178 aa17.62■□□□□ 0.41
SMPD3-211ENST00000568373 MAGEA10P43363 369 aaPredicted RBP17.62■□□□□ 0.41
SMPD3-211ENST00000568373 MTPNP58546 118 aa17.62■□□□□ 0.41
SMPD3-211ENST00000568373 RPS14P62263 151 aaKnown RBP17.62■□□□□ 0.41
SMPD3-211ENST00000568373 PDK3Q15120 406 aa17.62■□□□□ 0.41
SMPD3-211ENST00000568373 AMIGO2Q86SJ2 522 aa17.62■□□□□ 0.41
SMPD3-211ENST00000568373 TRAPPC5Q8IUR0 188 aa17.62■□□□□ 0.41
SMPD3-211ENST00000568373 ADGRG5Q8IZF4 528 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms