RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 WEE1P30291 646 aa10.3□□□□□ -0.76
USB1-212ENST00000566082 DCTP40126 519 aa10.3□□□□□ -0.76
USB1-212ENST00000566082 ALDH7A1P49419 539 aaKnown RBP10.3□□□□□ -0.76
USB1-212ENST00000566082 FAM189BP81408 668 aa10.3□□□□□ -0.76
USB1-212ENST00000566082 DSC3Q14574 896 aa10.3□□□□□ -0.76
USB1-212ENST00000566082 PON2Q15165 354 aa10.3□□□□□ -0.76
USB1-212ENST00000566082 ZNF284Q2VY69 593 aa10.3□□□□□ -0.76
USB1-212ENST00000566082 COQ5Q5HYK3 327 aa10.3□□□□□ -0.76
USB1-212ENST00000566082 KIAA1614Q5VZ46 1190 aa10.3□□□□□ -0.76
USB1-212ENST00000566082 NEK5Q6P3R8 708 aa10.3□□□□□ -0.76
USB1-212ENST00000566082 EPHX4Q8IUS5 362 aa10.3□□□□□ -0.76
USB1-212ENST00000566082 MFSD6LQ8IWD5 586 aa10.3□□□□□ -0.76
USB1-212ENST00000566082 PSD4Q8NDX1 1056 aa10.3□□□□□ -0.76
USB1-212ENST00000566082 OR13F1Q8NGS4 319 aa10.3□□□□□ -0.76
USB1-212ENST00000566082 STARD8Q92502 1023 aa10.3□□□□□ -0.76
USB1-212ENST00000566082 MYO19Q96H55 970 aa10.3□□□□□ -0.76
USB1-212ENST00000566082 YME1L1Q96TA2 773 aa10.3□□□□□ -0.76
USB1-212ENST00000566082 DSN1Q9H410 356 aa10.3□□□□□ -0.76
USB1-212ENST00000566082 TREX1Q9NSU2 369 aa10.3□□□□□ -0.76
USB1-212ENST00000566082 GSTK1Q9Y2Q3 226 aa10.3□□□□□ -0.76
USB1-212ENST00000566082 FCF1Q9Y324 198 aaKnown RBP10.3□□□□□ -0.76
USB1-212ENST00000566082 WNK3Q9BYP7 1800 aa10.3□□□□□ -0.76
USB1-212ENST00000566082 GLYATL1P3A0A0U1RQE8 302 aa10.3□□□□□ -0.76
USB1-212ENST00000566082 IGSF6O95976 241 aa10.3□□□□□ -0.76
USB1-212ENST00000566082 ALPIP09923 528 aa10.3□□□□□ -0.76
USB1-212ENST00000566082 HOXB6P17509 224 aaKnown RBP10.3□□□□□ -0.76
USB1-212ENST00000566082 TCEA1P23193 301 aaKnown RBP10.3□□□□□ -0.76
USB1-212ENST00000566082 KCNQ1P51787 676 aa10.3□□□□□ -0.76
USB1-212ENST00000566082 PTPN5P54829 565 aa10.3□□□□□ -0.76
USB1-212ENST00000566082 RPS7P62081 194 aaKnown RBP10.3□□□□□ -0.76
USB1-212ENST00000566082 SCN1BQ07699 218 aa10.3□□□□□ -0.76
USB1-212ENST00000566082 PM20D1Q6GTS8 502 aa10.3□□□□□ -0.76
USB1-212ENST00000566082 MZT2BQ6NZ67 158 aa10.3□□□□□ -0.76
USB1-212ENST00000566082 MAMDC4Q6UXC1 1216 aa10.3□□□□□ -0.76
USB1-212ENST00000566082 DDX53Q86TM3 631 aaKnown RBP10.3□□□□□ -0.76
USB1-212ENST00000566082 CDH24Q86UP0 819 aa10.3□□□□□ -0.76
USB1-212ENST00000566082 CHDHQ8NE62 594 aaPredicted RBP10.3□□□□□ -0.76
USB1-212ENST00000566082 ZMIZ2Q8NF64 920 aa10.3□□□□□ -0.76
USB1-212ENST00000566082 VANGL1Q8TAA9 524 aaPredicted RBP10.3□□□□□ -0.76
USB1-212ENST00000566082 FUBP1Q96AE4 644 aaKnown RBP10.3□□□□□ -0.76
USB1-212ENST00000566082 ZNF382Q96SR6 550 aa10.3□□□□□ -0.76
USB1-212ENST00000566082 C2orf49Q9BVC5 232 aaPredicted RBP10.3□□□□□ -0.76
USB1-212ENST00000566082 MAGEH1Q9H213 219 aa10.3□□□□□ -0.76
USB1-212ENST00000566082 C11orf16Q9NQ32 467 aa10.3□□□□□ -0.76
USB1-212ENST00000566082 MRPS7Q9Y2R9 242 aaKnown RBP10.3□□□□□ -0.76
USB1-212ENST00000566082 MAP4K5Q9Y4K4 846 aa10.3□□□□□ -0.76
USB1-212ENST00000566082 OAS3Q9Y6K5 1087 aaKnown RBP10.3□□□□□ -0.76
USB1-212ENST00000566082 A0A0D9SEW6 157 aa10.29□□□□□ -0.76
USB1-212ENST00000566082 SMIM30A4D0T7 59 aa10.29□□□□□ -0.76
USB1-212ENST00000566082 NOTOA8MTQ0 251 aa10.29□□□□□ -0.76
USB1-212ENST00000566082 UPK3BL1B0FP48 263 aa10.29□□□□□ -0.76
USB1-212ENST00000566082 UPK3BL2E5RIL1 263 aa10.29□□□□□ -0.76
USB1-212ENST00000566082 AREL1O15033 823 aa10.29□□□□□ -0.76
USB1-212ENST00000566082 CLDN11O75508 207 aa10.29□□□□□ -0.76
USB1-212ENST00000566082 RFPL2O75678 378 aa10.29□□□□□ -0.76
USB1-212ENST00000566082 CCNDBP1O95273 360 aa10.29□□□□□ -0.76
USB1-212ENST00000566082 HPRP00739 348 aa10.29□□□□□ -0.76
USB1-212ENST00000566082 VIPP01282 170 aa10.29□□□□□ -0.76
USB1-212ENST00000566082 CATP04040 527 aaKnown RBP10.29□□□□□ -0.76
USB1-212ENST00000566082 SBK3P0C264 359 aa10.29□□□□□ -0.76
USB1-212ENST00000566082 TNNI3P19429 210 aa10.29□□□□□ -0.76
USB1-212ENST00000566082 GGT1P19440 569 aa10.29□□□□□ -0.76
USB1-212ENST00000566082 HNF4AP41235 474 aa10.29□□□□□ -0.76
USB1-212ENST00000566082 PPP5CP53041 499 aa10.29□□□□□ -0.76
USB1-212ENST00000566082 PRKAG1P54619 331 aa10.29□□□□□ -0.76
USB1-212ENST00000566082 ERVPABLB-1P60509 514 aa10.29□□□□□ -0.76
USB1-212ENST00000566082 CD83Q01151 205 aa10.29□□□□□ -0.76
USB1-212ENST00000566082 ABHD18Q0P651 414 aa10.29□□□□□ -0.76
USB1-212ENST00000566082 DEF8Q6ZN54 512 aa10.29□□□□□ -0.76
USB1-212ENST00000566082 CNTN4Q8IWV2 1026 aa10.29□□□□□ -0.76
USB1-212ENST00000566082 ARHGAP12Q8IWW6 846 aa10.29□□□□□ -0.76
USB1-212ENST00000566082 OR10G2Q8NGC3 310 aa10.29□□□□□ -0.76
USB1-212ENST00000566082 OR8J3Q8NGG0 315 aa10.29□□□□□ -0.76
USB1-212ENST00000566082 TMCO6Q96DC7 493 aa10.29□□□□□ -0.76
USB1-212ENST00000566082 HSH2DQ96JZ2 352 aa10.29□□□□□ -0.76
USB1-212ENST00000566082 GPR78Q96P69 363 aa10.29□□□□□ -0.76
USB1-212ENST00000566082 SHANK3Q9BYB0 1731 aa10.29□□□□□ -0.76
USB1-212ENST00000566082 ENPP5Q9UJA9 477 aa10.29□□□□□ -0.76
USB1-212ENST00000566082 CORINQ9Y5Q5 1042 aa10.29□□□□□ -0.76
USB1-212ENST00000566082 PTGESO14684 152 aa10.29□□□□□ -0.76
USB1-212ENST00000566082 ADAMDEC1O15204 470 aa10.29□□□□□ -0.76
USB1-212ENST00000566082 ACOX3O15254 700 aa10.29□□□□□ -0.76
USB1-212ENST00000566082 ANXA4P09525 319 aaPredicted RBP10.29□□□□□ -0.76
USB1-212ENST00000566082 HTR1BP28222 390 aa10.29□□□□□ -0.76
USB1-212ENST00000566082 MAPKAPK2P49137 400 aa10.29□□□□□ -0.76
USB1-212ENST00000566082 CDKN1CP49918 316 aaPredicted RBP10.29□□□□□ -0.76
USB1-212ENST00000566082 SMAD3P84022 425 aaKnown RBP10.29□□□□□ -0.76
USB1-212ENST00000566082 GRIK2Q13002 908 aa10.29□□□□□ -0.76
USB1-212ENST00000566082 CDK5R2Q13319 367 aa10.29□□□□□ -0.76
USB1-212ENST00000566082 CAMK2GQ13555 558 aaPredicted RBP10.29□□□□□ -0.76
USB1-212ENST00000566082 GANABQ14697 944 aaKnown RBP10.29□□□□□ -0.76
USB1-212ENST00000566082 KCNJ8Q15842 424 aa10.29□□□□□ -0.76
USB1-212ENST00000566082 PLA2G4EQ3MJ16 856 aa10.29□□□□□ -0.76
USB1-212ENST00000566082 ATAD3BQ5T9A4 648 aa10.29□□□□□ -0.76
USB1-212ENST00000566082 PSAPL1Q6NUJ1 521 aa10.29□□□□□ -0.76
USB1-212ENST00000566082 TBPL2Q6SJ96 375 aa10.29□□□□□ -0.76
USB1-212ENST00000566082 TRMT11Q7Z4G4 463 aaKnown RBP10.29□□□□□ -0.76
USB1-212ENST00000566082 TRIM48Q8IWZ4 208 aa10.29□□□□□ -0.76
USB1-212ENST00000566082 RPL3LQ92901 407 aaKnown RBP10.29□□□□□ -0.76
USB1-212ENST00000566082 BEX2Q9BXY8 128 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 129.8 ms