RNA–Protein interactions for RNA: ENST00000553300.5

HNRNPC-205, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-205ENST00000553300 ASIC3Q9UHC3 531 aa12.69□□□□□ -0.38
HNRNPC-205ENST00000553300 PLAGL1Q9UM63 463 aa12.69□□□□□ -0.38
HNRNPC-205ENST00000553300 FARSAQ9Y285 508 aaKnown RBP12.69□□□□□ -0.38
HNRNPC-205ENST00000553300 MRPS18BQ9Y676 258 aaKnown RBP12.69□□□□□ -0.38
HNRNPC-205ENST00000553300 FAM169AQ9Y6X4 670 aa12.69□□□□□ -0.38
HNRNPC-205ENST00000553300 DNALI1O14645 258 aaPredicted RBP12.69□□□□□ -0.38
HNRNPC-205ENST00000553300 OR2B3O76000 313 aa12.69□□□□□ -0.38
HNRNPC-205ENST00000553300 MATN4O95460 622 aa12.69□□□□□ -0.38
HNRNPC-205ENST00000553300 C1orf105O95561 183 aa12.69□□□□□ -0.38
HNRNPC-205ENST00000553300 CD63P08962 238 aa12.69□□□□□ -0.38
HNRNPC-205ENST00000553300 AGXTP21549 392 aa12.69□□□□□ -0.38
HNRNPC-205ENST00000553300 RORAP35398 523 aa12.69□□□□□ -0.38
HNRNPC-205ENST00000553300 GPS2Q13227 327 aa12.69□□□□□ -0.38
HNRNPC-205ENST00000553300 KCNAB2Q13303 367 aa12.69□□□□□ -0.38
HNRNPC-205ENST00000553300 GBX1Q14549 363 aa12.69□□□□□ -0.38
HNRNPC-205ENST00000553300 DEFB109BQ30KR1 87 aa12.69□□□□□ -0.38
HNRNPC-205ENST00000553300 TTLL9Q3SXZ7 439 aa12.69□□□□□ -0.38
HNRNPC-205ENST00000553300 ZNF789Q5FWF6 425 aa12.69□□□□□ -0.38
HNRNPC-205ENST00000553300 TLDC1Q6P9B6 456 aa12.69□□□□□ -0.38
HNRNPC-205ENST00000553300 FAM199XQ6PEV8 388 aaPredicted RBP12.69□□□□□ -0.38
HNRNPC-205ENST00000553300 NEK10Q6ZWH5 1172 aa12.69□□□□□ -0.38
HNRNPC-205ENST00000553300 ZBTB2Q8N680 514 aa12.69□□□□□ -0.38
HNRNPC-205ENST00000553300 LINC01555Q8NAE3 123 aa12.69□□□□□ -0.38
HNRNPC-205ENST00000553300 HMGCLL1Q8TB92 370 aa12.69□□□□□ -0.38
HNRNPC-205ENST00000553300 DENND1AQ8TEH3 1009 aa12.69□□□□□ -0.38
HNRNPC-205ENST00000553300 THAP4Q8WY91 577 aa12.69□□□□□ -0.38
HNRNPC-205ENST00000553300 KCNJ9Q92806 393 aa12.69□□□□□ -0.38
HNRNPC-205ENST00000553300 ZUFSPQ96AP4 578 aa12.69□□□□□ -0.38
HNRNPC-205ENST00000553300 NLNQ9BYT8 704 aa12.69□□□□□ -0.38
HNRNPC-205ENST00000553300 KLHL25Q9H0H3 589 aa12.69□□□□□ -0.38
HNRNPC-205ENST00000553300 ACTL8Q9H568 366 aa12.69□□□□□ -0.38
HNRNPC-205ENST00000553300 C20orf96Q9NUD7 363 aaPredicted RBP12.69□□□□□ -0.38
HNRNPC-205ENST00000553300 PLCL2Q9UPR0 1127 aa12.69□□□□□ -0.38
HNRNPC-205ENST00000553300 HEMK1Q9Y5R4 338 aaPredicted RBP12.69□□□□□ -0.38
HNRNPC-205ENST00000553300 USP27XA6NNY8 438 aa12.68□□□□□ -0.38
HNRNPC-205ENST00000553300 CCDC188H7C350 402 aa12.68□□□□□ -0.38
HNRNPC-205ENST00000553300 ZNF749O43361 778 aa12.68□□□□□ -0.38
HNRNPC-205ENST00000553300 NIPSNAP2O75323 286 aa12.68□□□□□ -0.38
HNRNPC-205ENST00000553300 PGAM1P18669 254 aa12.68□□□□□ -0.38
HNRNPC-205ENST00000553300 HSD17B2P37059 387 aa12.68□□□□□ -0.38
HNRNPC-205ENST00000553300 PAFAH1B1P43034 410 aa12.68□□□□□ -0.38
HNRNPC-205ENST00000553300 NFATC3Q12968 1075 aa12.68□□□□□ -0.38
HNRNPC-205ENST00000553300 SF1Q15637 639 aaKnown RBP12.68□□□□□ -0.38
HNRNPC-205ENST00000553300 UGT8Q16880 541 aa12.68□□□□□ -0.38
HNRNPC-205ENST00000553300 KCTD19Q17RG1 926 aaPredicted RBP12.68□□□□□ -0.38
HNRNPC-205ENST00000553300 ZC3H12BQ5HYM0 836 aaKnown RBP12.68□□□□□ -0.38
HNRNPC-205ENST00000553300 TRIM73Q86UV7 250 aa12.68□□□□□ -0.38
HNRNPC-205ENST00000553300 CREG2Q8IUH2 290 aa12.68□□□□□ -0.38
HNRNPC-205ENST00000553300 DNAJC22Q8N4W6 341 aa12.68□□□□□ -0.38
HNRNPC-205ENST00000553300 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.68□□□□□ -0.38
HNRNPC-205ENST00000553300 RNF31Q96EP0 1072 aa12.68□□□□□ -0.38
HNRNPC-205ENST00000553300 FAM167BQ9BTA0 163 aa12.68□□□□□ -0.38
HNRNPC-205ENST00000553300 DHRS4Q9BTZ2 278 aa12.68□□□□□ -0.38
HNRNPC-205ENST00000553300 CHST8Q9H2A9 424 aa12.68□□□□□ -0.38
HNRNPC-205ENST00000553300 AKIRIN1Q9H9L7 192 aaPredicted RBP12.68□□□□□ -0.38
HNRNPC-205ENST00000553300 FAM60AQ9NP50 221 aa12.68□□□□□ -0.38
HNRNPC-205ENST00000553300 FAM114A2Q9NRY5 505 aa12.68□□□□□ -0.38
HNRNPC-205ENST00000553300 PCMTD2Q9NV79 361 aa12.68□□□□□ -0.38
HNRNPC-205ENST00000553300 SPATA7Q9P0W8 599 aa12.68□□□□□ -0.38
HNRNPC-205ENST00000553300 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.68□□□□□ -0.38
HNRNPC-205ENST00000553300 SRPK3Q9UPE1 567 aa12.68□□□□□ -0.38
HNRNPC-205ENST00000553300 KCNMB2Q9Y691 235 aa12.68□□□□□ -0.38
HNRNPC-205ENST00000553300 SNRNP200O75643 2136 aaKnown RBP12.67□□□□□ -0.38
HNRNPC-205ENST00000553300 CDC14CA4D256 554 aa12.67□□□□□ -0.38
HNRNPC-205ENST00000553300 ZNF839A8K0R7 811 aa12.67□□□□□ -0.38
HNRNPC-205ENST00000553300 TARM1B6A8C7 271 aa12.67□□□□□ -0.38
HNRNPC-205ENST00000553300 C9J4A7 227 aa12.67□□□□□ -0.38
HNRNPC-205ENST00000553300 NDC80O14777 642 aa12.67□□□□□ -0.38
HNRNPC-205ENST00000553300 CATP04040 527 aaKnown RBP12.67□□□□□ -0.38
HNRNPC-205ENST00000553300 ENO3P13929 434 aaPredicted RBP12.67□□□□□ -0.38
HNRNPC-205ENST00000553300 PLA2G2AP14555 144 aa12.67□□□□□ -0.38
HNRNPC-205ENST00000553300 PEBP1P30086 187 aaKnown RBP12.67□□□□□ -0.38
HNRNPC-205ENST00000553300 GABRA4P48169 554 aa12.67□□□□□ -0.38
HNRNPC-205ENST00000553300 CTBP1Q13363 440 aa12.67□□□□□ -0.38
HNRNPC-205ENST00000553300 ARHGAP19Q14CB8 494 aa12.67□□□□□ -0.38
HNRNPC-205ENST00000553300 NAA25Q14CX7 972 aa12.67□□□□□ -0.38
HNRNPC-205ENST00000553300 MORF4L2Q15014 288 aa12.67□□□□□ -0.38
HNRNPC-205ENST00000553300 ZIC1Q15915 447 aa12.67□□□□□ -0.38
HNRNPC-205ENST00000553300 RHBDD2Q6NTF9 364 aa12.67□□□□□ -0.38
HNRNPC-205ENST00000553300 CNSTQ6PJW8 725 aa12.67□□□□□ -0.38
HNRNPC-205ENST00000553300 APLFQ8IW19 511 aaPredicted RBP12.67□□□□□ -0.38
HNRNPC-205ENST00000553300 SYTL1Q8IYJ3 562 aa12.67□□□□□ -0.38
HNRNPC-205ENST00000553300 PDIK1LQ8N165 341 aa12.67□□□□□ -0.38
HNRNPC-205ENST00000553300 LMNTD1Q8N9Z9 388 aa12.67□□□□□ -0.38
HNRNPC-205ENST00000553300 PROKR1Q8TCW9 393 aa12.67□□□□□ -0.38
HNRNPC-205ENST00000553300 EBNA1BP2Q99848 306 aaKnown RBP12.67□□□□□ -0.38
HNRNPC-205ENST00000553300 TRIM56Q9BRZ2 755 aaKnown RBP12.67□□□□□ -0.38
HNRNPC-205ENST00000553300 PADI2Q9Y2J8 665 aa12.67□□□□□ -0.38
HNRNPC-205ENST00000553300 NFS1Q9Y697 457 aa12.67□□□□□ -0.38
HNRNPC-205ENST00000553300 PCM1Q15154 2024 aa12.66□□□□□ -0.38
HNRNPC-205ENST00000553300 H3BMH7 237 aa12.66□□□□□ -0.38
HNRNPC-205ENST00000553300 MKRN2OSH3BPM6 223 aa12.66□□□□□ -0.38
HNRNPC-205ENST00000553300 EIF3FO00303 357 aaPredicted RBP12.66□□□□□ -0.38
HNRNPC-205ENST00000553300 ZSCAN9O15535 394 aaPredicted RBP12.66□□□□□ -0.38
HNRNPC-205ENST00000553300 PRICKLE3O43900 615 aaPredicted RBP12.66□□□□□ -0.38
HNRNPC-205ENST00000553300 PSIP1O75475 530 aaKnown RBP12.66□□□□□ -0.38
HNRNPC-205ENST00000553300 CBSLP0DN79 551 aa12.66□□□□□ -0.38
HNRNPC-205ENST00000553300 MAGP20916 626 aa12.66□□□□□ -0.38
HNRNPC-205ENST00000553300 IVDP26440 423 aa12.66□□□□□ -0.38
HNRNPC-205ENST00000553300 CBSP35520 551 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms