RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 UGT2B7P16662 529 aa9.4□□□□□ -0.9
TNFRSF1A-214ENST00000543048 TCN2P20062 427 aa9.4□□□□□ -0.9
TNFRSF1A-214ENST00000543048 CD9P21926 228 aa9.4□□□□□ -0.9
TNFRSF1A-214ENST00000543048 F8A1P23610 371 aa9.4□□□□□ -0.9
TNFRSF1A-214ENST00000543048 IVDP26440 423 aa9.4□□□□□ -0.9
TNFRSF1A-214ENST00000543048 CTBP1Q13363 440 aa9.4□□□□□ -0.9
TNFRSF1A-214ENST00000543048 LONRF1Q17RB8 773 aa9.4□□□□□ -0.9
TNFRSF1A-214ENST00000543048 SLC5A12Q1EHB4 618 aa9.4□□□□□ -0.9
TNFRSF1A-214ENST00000543048 ZNF789Q5FWF6 425 aa9.4□□□□□ -0.9
TNFRSF1A-214ENST00000543048 TMEM126BQ8IUX1 230 aa9.4□□□□□ -0.9
TNFRSF1A-214ENST00000543048 DCUN1D3Q8IWE4 304 aa9.4□□□□□ -0.9
TNFRSF1A-214ENST00000543048 KLHL7Q8IXQ5 586 aa9.4□□□□□ -0.9
TNFRSF1A-214ENST00000543048 LMNTD2Q8IXW0 634 aa9.4□□□□□ -0.9
TNFRSF1A-214ENST00000543048 AGGF1Q8N302 714 aaeCLIP9.4□□□□□ -0.9
TNFRSF1A-214ENST00000543048 FLVCR1-AS1Q8TAF5 88 aa9.4□□□□□ -0.9
TNFRSF1A-214ENST00000543048 MAGEC3Q8TD91 643 aa9.4□□□□□ -0.9
TNFRSF1A-214ENST00000543048 SKA2Q8WVK7 121 aaPredicted RBP9.4□□□□□ -0.9
TNFRSF1A-214ENST00000543048 RAD51AP1Q96B01 352 aa9.4□□□□□ -0.9
TNFRSF1A-214ENST00000543048 SLC22A18Q96BI1 424 aa9.4□□□□□ -0.9
TNFRSF1A-214ENST00000543048 LRFN5Q96NI6 719 aa9.4□□□□□ -0.9
TNFRSF1A-214ENST00000543048 TRIM56Q9BRZ2 755 aaKnown RBP9.4□□□□□ -0.9
TNFRSF1A-214ENST00000543048 GPR87Q9BY21 358 aa9.4□□□□□ -0.9
TNFRSF1A-214ENST00000543048 TWSG1Q9GZX9 223 aa9.4□□□□□ -0.9
TNFRSF1A-214ENST00000543048 KLHL25Q9H0H3 589 aa9.4□□□□□ -0.9
TNFRSF1A-214ENST00000543048 C20orf96Q9NUD7 363 aaPredicted RBP9.4□□□□□ -0.9
TNFRSF1A-214ENST00000543048 SLC39A10Q9ULF5 831 aa9.4□□□□□ -0.9
TNFRSF1A-214ENST00000543048 TLN1Q9Y490 2541 aaKnown RBP9.4□□□□□ -0.91
TNFRSF1A-214ENST00000543048 A0A0J9YY10 115 aa9.39□□□□□ -0.91
TNFRSF1A-214ENST00000543048 C21orf140B9A014 251 aa9.39□□□□□ -0.91
TNFRSF1A-214ENST00000543048 E5RI56 91 aa9.39□□□□□ -0.91
TNFRSF1A-214ENST00000543048 TERTO14746 1132 aaKnown RBP9.39□□□□□ -0.91
TNFRSF1A-214ENST00000543048 RASGRF2O14827 1237 aa9.39□□□□□ -0.91
TNFRSF1A-214ENST00000543048 CPNE3O75131 537 aaKnown RBP9.39□□□□□ -0.91
TNFRSF1A-214ENST00000543048 NIPSNAP2O75323 286 aa9.39□□□□□ -0.91
TNFRSF1A-214ENST00000543048 C1QL1O75973 258 aa9.39□□□□□ -0.91
TNFRSF1A-214ENST00000543048 URI1O94763 535 aaPredicted RBP9.39□□□□□ -0.91
TNFRSF1A-214ENST00000543048 C1orf105O95561 183 aa9.39□□□□□ -0.91
TNFRSF1A-214ENST00000543048 TTC4O95801 387 aa9.39□□□□□ -0.91
TNFRSF1A-214ENST00000543048 HBQ1P09105 142 aa9.39□□□□□ -0.91
TNFRSF1A-214ENST00000543048 PKLRP30613 574 aa9.39□□□□□ -0.91
TNFRSF1A-214ENST00000543048 CCNFP41002 786 aa9.39□□□□□ -0.91
TNFRSF1A-214ENST00000543048 CCR10P46092 362 aa9.39□□□□□ -0.91
TNFRSF1A-214ENST00000543048 ITGA1P56199 1179 aa9.39□□□□□ -0.91
TNFRSF1A-214ENST00000543048 RPS15P62841 145 aaKnown RBP9.39□□□□□ -0.91
TNFRSF1A-214ENST00000543048 DR1Q01658 176 aa9.39□□□□□ -0.91
TNFRSF1A-214ENST00000543048 DNASE1L3Q13609 305 aa9.39□□□□□ -0.91
TNFRSF1A-214ENST00000543048 COL9A2Q14055 689 aaPredicted RBP9.39□□□□□ -0.91
TNFRSF1A-214ENST00000543048 GRB7Q14451 532 aa9.39□□□□□ -0.91
TNFRSF1A-214ENST00000543048 IZUMO3Q5VZ72 239 aa9.39□□□□□ -0.91
TNFRSF1A-214ENST00000543048 ZNF470Q6ECI4 717 aa9.39□□□□□ -0.91
TNFRSF1A-214ENST00000543048 C16orf46Q6P387 395 aa9.39□□□□□ -0.91
TNFRSF1A-214ENST00000543048 BORAQ6PGQ7 559 aa9.39□□□□□ -0.91
TNFRSF1A-214ENST00000543048 CDHR3Q6ZTQ4 885 aa9.39□□□□□ -0.91
TNFRSF1A-214ENST00000543048 TRIM73Q86UV7 250 aa9.39□□□□□ -0.91
TNFRSF1A-214ENST00000543048 DENND6AQ8IWF6 608 aa9.39□□□□□ -0.91
TNFRSF1A-214ENST00000543048 ZNF843Q8N446 348 aa9.39□□□□□ -0.91
TNFRSF1A-214ENST00000543048 RAB42Q8N4Z0 105 aa9.39□□□□□ -0.91
TNFRSF1A-214ENST00000543048 C2orf73Q8N5S3 287 aaPredicted RBP9.39□□□□□ -0.91
TNFRSF1A-214ENST00000543048 ZBTB2Q8N680 514 aa9.39□□□□□ -0.91
TNFRSF1A-214ENST00000543048 C19orf47Q8N9M1 422 aaKnown RBP9.39□□□□□ -0.91
TNFRSF1A-214ENST00000543048 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.39□□□□□ -0.91
TNFRSF1A-214ENST00000543048 OR2L8Q8NGY9 312 aa9.39□□□□□ -0.91
TNFRSF1A-214ENST00000543048 OR1L3Q8NH93 324 aa9.39□□□□□ -0.91
TNFRSF1A-214ENST00000543048 GABPB2Q8TAK5 448 aaPredicted RBP9.39□□□□□ -0.91
TNFRSF1A-214ENST00000543048 CT55Q8WUE5 264 aa9.39□□□□□ -0.91
TNFRSF1A-214ENST00000543048 STARD8Q92502 1023 aa9.39□□□□□ -0.91
TNFRSF1A-214ENST00000543048 N4BP2L2Q92802 583 aaPredicted RBP9.39□□□□□ -0.91
TNFRSF1A-214ENST00000543048 INPP5DQ92835 1189 aa9.39□□□□□ -0.91
TNFRSF1A-214ENST00000543048 MR1Q95460 341 aa9.39□□□□□ -0.91
TNFRSF1A-214ENST00000543048 CLIP3Q96DZ5 547 aa9.39□□□□□ -0.91
TNFRSF1A-214ENST00000543048 EBNA1BP2Q99848 306 aaKnown RBP9.39□□□□□ -0.91
TNFRSF1A-214ENST00000543048 NAT9Q9BTE0 207 aa9.39□□□□□ -0.91
TNFRSF1A-214ENST00000543048 MENTQ9BUN1 341 aa9.39□□□□□ -0.91
TNFRSF1A-214ENST00000543048 RAB11FIP5Q9BXF6 653 aa9.39□□□□□ -0.91
TNFRSF1A-214ENST00000543048 SEMA4CQ9C0C4 833 aa9.39□□□□□ -0.91
TNFRSF1A-214ENST00000543048 CCDC68Q9H2F9 335 aa9.39□□□□□ -0.91
TNFRSF1A-214ENST00000543048 AKIRIN1Q9H9L7 192 aaPredicted RBP9.39□□□□□ -0.91
TNFRSF1A-214ENST00000543048 FAM60AQ9NP50 221 aa9.39□□□□□ -0.91
TNFRSF1A-214ENST00000543048 FBXO6Q9NRD1 293 aaPredicted RBP9.39□□□□□ -0.91
TNFRSF1A-214ENST00000543048 IL1RAPL1Q9NZN1 696 aa9.39□□□□□ -0.91
TNFRSF1A-214ENST00000543048 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.39□□□□□ -0.91
TNFRSF1A-214ENST00000543048 KLHL42Q9P2K6 505 aa9.39□□□□□ -0.91
TNFRSF1A-214ENST00000543048 GALPQ9UBC7 116 aa9.39□□□□□ -0.91
TNFRSF1A-214ENST00000543048 FBXO5Q9UKT4 447 aa9.39□□□□□ -0.91
TNFRSF1A-214ENST00000543048 FARSAQ9Y285 508 aaKnown RBP9.39□□□□□ -0.91
TNFRSF1A-214ENST00000543048 PCDHGA6Q9Y5G7 932 aa9.39□□□□□ -0.91
TNFRSF1A-214ENST00000543048 MRPS18BQ9Y676 258 aaKnown RBP9.39□□□□□ -0.91
TNFRSF1A-214ENST00000543048 NFS1Q9Y697 457 aa9.39□□□□□ -0.91
TNFRSF1A-214ENST00000543048 COMMD10Q9Y6G5 202 aa9.39□□□□□ -0.91
TNFRSF1A-214ENST00000543048 BAHCC1Q9P281 2608 aa9.38□□□□□ -0.91
TNFRSF1A-214ENST00000543048 BOD1L1Q8NFC6 3051 aa9.38□□□□□ -0.91
TNFRSF1A-214ENST00000543048 GCN1Q92616 2671 aaKnown RBP9.38□□□□□ -0.91
TNFRSF1A-214ENST00000543048 E7EQ34 232 aa9.38□□□□□ -0.91
TNFRSF1A-214ENST00000543048 MEN1O00255 615 aa9.38□□□□□ -0.91
TNFRSF1A-214ENST00000543048 CREG1O75629 220 aa9.38□□□□□ -0.91
TNFRSF1A-214ENST00000543048 HAUS5O94927 633 aa9.38□□□□□ -0.91
TNFRSF1A-214ENST00000543048 FKBP9O95302 570 aa9.38□□□□□ -0.91
TNFRSF1A-214ENST00000543048 MATN4O95460 622 aa9.38□□□□□ -0.91
TNFRSF1A-214ENST00000543048 PRKAR1AP10644 381 aa9.38□□□□□ -0.91
TNFRSF1A-214ENST00000543048 PGAM1P18669 254 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms