RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 STIM1Q13586 685 aa4.66□□□□□ -1.66
HMGB1P23-201ENST00000518743 PON2Q15165 354 aa4.66□□□□□ -1.66
HMGB1P23-201ENST00000518743 CDSNQ15517 529 aa4.66□□□□□ -1.66
HMGB1P23-201ENST00000518743 STXBP2Q15833 593 aa4.66□□□□□ -1.66
HMGB1P23-201ENST00000518743 HSPB2Q16082 182 aa4.66□□□□□ -1.66
HMGB1P23-201ENST00000518743 TWISTNBQ3B726 338 aaPredicted RBP4.66□□□□□ -1.66
HMGB1P23-201ENST00000518743 EARS2Q5JPH6 523 aaKnown RBP4.66□□□□□ -1.66
HMGB1P23-201ENST00000518743 METTL2BQ6P1Q9 378 aaKnown RBP4.66□□□□□ -1.66
HMGB1P23-201ENST00000518743 LPCAT2Q7L5N7 544 aa4.66□□□□□ -1.66
HMGB1P23-201ENST00000518743 TMEM173Q86WV6 379 aaPredicted RBP4.66□□□□□ -1.66
HMGB1P23-201ENST00000518743 SNX32Q86XE0 403 aa4.66□□□□□ -1.66
HMGB1P23-201ENST00000518743 SFTPA2Q8IWL1 248 aa4.66□□□□□ -1.66
HMGB1P23-201ENST00000518743 DDIASQ8IXT1 998 aa4.66□□□□□ -1.66
HMGB1P23-201ENST00000518743 ZNF248Q8NDW4 579 aa4.66□□□□□ -1.66
HMGB1P23-201ENST00000518743 GDAP1Q8TB36 358 aa4.66□□□□□ -1.66
HMGB1P23-201ENST00000518743 ITFG1Q8TB96 612 aa4.66□□□□□ -1.66
HMGB1P23-201ENST00000518743 PTPMT1Q8WUK0 201 aaPredicted RBP4.66□□□□□ -1.66
HMGB1P23-201ENST00000518743 PTERQ96BW5 349 aa4.66□□□□□ -1.66
HMGB1P23-201ENST00000518743 MSI2Q96DH6 328 aaKnown RBP4.66□□□□□ -1.66
HMGB1P23-201ENST00000518743 METTL2AQ96IZ6 378 aaKnown RBP4.66□□□□□ -1.66
HMGB1P23-201ENST00000518743 CEP295NLQ96MC4 621 aa4.66□□□□□ -1.66
HMGB1P23-201ENST00000518743 DACH2Q96NX9 599 aa4.66□□□□□ -1.66
HMGB1P23-201ENST00000518743 SRSF8Q9BRL6 282 aaKnown RBP4.66□□□□□ -1.66
HMGB1P23-201ENST00000518743 CRNKL1Q9BZJ0 848 aaKnown RBP4.66□□□□□ -1.66
HMGB1P23-201ENST00000518743 RETREG1Q9H6L5 497 aa4.66□□□□□ -1.66
HMGB1P23-201ENST00000518743 MAGIXQ9H6Y5 334 aa4.66□□□□□ -1.66
HMGB1P23-201ENST00000518743 MMRN2Q9H8L6 949 aa4.66□□□□□ -1.66
HMGB1P23-201ENST00000518743 MBNL1Q9NR56 388 aaKnown RBP4.66□□□□□ -1.66
HMGB1P23-201ENST00000518743 DECR2Q9NUI1 292 aa4.66□□□□□ -1.66
HMGB1P23-201ENST00000518743 GDE1Q9NZC3 331 aa4.66□□□□□ -1.66
HMGB1P23-201ENST00000518743 MTRRQ9UBK8 725 aa4.66□□□□□ -1.66
HMGB1P23-201ENST00000518743 TLK1Q9UKI8 766 aa4.66□□□□□ -1.66
HMGB1P23-201ENST00000518743 PACSIN3Q9UKS6 424 aa4.66□□□□□ -1.66
HMGB1P23-201ENST00000518743 ZNF148Q9UQR1 794 aa4.66□□□□□ -1.66
HMGB1P23-201ENST00000518743 PHLPP2Q6ZVD8 1323 aa4.66□□□□□ -1.66
HMGB1P23-201ENST00000518743 LOC102723996A0A087X1L8 192 aa4.65□□□□□ -1.67
HMGB1P23-201ENST00000518743 A0A0A0MQY5 61 aa4.65□□□□□ -1.67
HMGB1P23-201ENST00000518743 KIR2DS5A0A0G2JLQ3 304 aa4.65□□□□□ -1.67
HMGB1P23-201ENST00000518743 GRID2IPA4D2P6 1211 aa4.65□□□□□ -1.67
HMGB1P23-201ENST00000518743 GAGE12JA6NER3 117 aa4.65□□□□□ -1.67
HMGB1P23-201ENST00000518743 KRTAP9-7A8MTY7 169 aa4.65□□□□□ -1.67
HMGB1P23-201ENST00000518743 KIR2DS3K7RE56 304 aa4.65□□□□□ -1.67
HMGB1P23-201ENST00000518743 TEX28O15482 410 aa4.65□□□□□ -1.67
HMGB1P23-201ENST00000518743 RPS6KA5O75582 802 aa4.65□□□□□ -1.67
HMGB1P23-201ENST00000518743 NADKO95544 446 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P23-201ENST00000518743 APBB3O95704 486 aa4.65□□□□□ -1.67
HMGB1P23-201ENST00000518743 WNT1P04628 370 aa4.65□□□□□ -1.67
HMGB1P23-201ENST00000518743 ICAM1P05362 532 aa4.65□□□□□ -1.67
HMGB1P23-201ENST00000518743 UQCRFS1P1P0C7P4 283 aa4.65□□□□□ -1.67
HMGB1P23-201ENST00000518743 ZNF853P0CG23 659 aa4.65□□□□□ -1.67
HMGB1P23-201ENST00000518743 TACR2P21452 398 aa4.65□□□□□ -1.67
HMGB1P23-201ENST00000518743 BCKDHBP21953 392 aa4.65□□□□□ -1.67
HMGB1P23-201ENST00000518743 SLC1A4P43007 532 aa4.65□□□□□ -1.67
HMGB1P23-201ENST00000518743 RPS13P62277 151 aaKnown RBP4.65□□□□□ -1.67
HMGB1P23-201ENST00000518743 RPS6P62753 249 aaKnown RBP4.65□□□□□ -1.67
HMGB1P23-201ENST00000518743 SORDQ00796 357 aa4.65□□□□□ -1.67
HMGB1P23-201ENST00000518743 FAM27E3Q08E93 113 aa4.65□□□□□ -1.67
HMGB1P23-201ENST00000518743 EFEMP1Q12805 493 aa4.65□□□□□ -1.67
HMGB1P23-201ENST00000518743 GRIK3Q13003 919 aa4.65□□□□□ -1.67
HMGB1P23-201ENST00000518743 NAE1Q13564 534 aa4.65□□□□□ -1.67
HMGB1P23-201ENST00000518743 NEDD9Q14511 834 aa4.65□□□□□ -1.67
HMGB1P23-201ENST00000518743 ZNF268Q14587 947 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P23-201ENST00000518743 PGM5Q15124 567 aa4.65□□□□□ -1.67
HMGB1P23-201ENST00000518743 USH1GQ495M9 461 aa4.65□□□□□ -1.67
HMGB1P23-201ENST00000518743 AWAT1Q58HT5 328 aa4.65□□□□□ -1.67
HMGB1P23-201ENST00000518743 KRBOX4Q5JUW0 171 aa4.65□□□□□ -1.67
HMGB1P23-201ENST00000518743 PRAMEF17Q5VTA0 474 aa4.65□□□□□ -1.67
HMGB1P23-201ENST00000518743 FNDC7Q5VTL7 733 aa4.65□□□□□ -1.67
HMGB1P23-201ENST00000518743 LYSMD4Q5XG99 296 aa4.65□□□□□ -1.67
HMGB1P23-201ENST00000518743 MSANTD1Q6ZTZ1 278 aa4.65□□□□□ -1.67
HMGB1P23-201ENST00000518743 FAM47EQ6ZV65 393 aa4.65□□□□□ -1.67
HMGB1P23-201ENST00000518743 TTLL10Q6ZVT0 673 aa4.65□□□□□ -1.67
HMGB1P23-201ENST00000518743 PLPPR4Q7Z2D5 763 aa4.65□□□□□ -1.67
HMGB1P23-201ENST00000518743 ADCK2Q7Z695 626 aa4.65□□□□□ -1.67
HMGB1P23-201ENST00000518743 PATL1Q86TB9 770 aaKnown RBP4.65□□□□□ -1.67
HMGB1P23-201ENST00000518743 CHSY1Q86X52 802 aa4.65□□□□□ -1.67
HMGB1P23-201ENST00000518743 ZBTB2Q8N680 514 aa4.65□□□□□ -1.67
HMGB1P23-201ENST00000518743 XXYLT1Q8NBI6 393 aa4.65□□□□□ -1.67
HMGB1P23-201ENST00000518743 TMEM163Q8TC26 289 aa4.65□□□□□ -1.67
HMGB1P23-201ENST00000518743 KAT2AQ92830 837 aa4.65□□□□□ -1.67
HMGB1P23-201ENST00000518743 ZNF419Q96HQ0 510 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P23-201ENST00000518743 IGSF21Q96ID5 467 aa4.65□□□□□ -1.67
HMGB1P23-201ENST00000518743 SH3GL2Q99962 352 aa4.65□□□□□ -1.67
HMGB1P23-201ENST00000518743 FAM118BQ9BPY3 351 aa4.65□□□□□ -1.67
HMGB1P23-201ENST00000518743 PIMREGQ9BSJ6 248 aa4.65□□□□□ -1.67
HMGB1P23-201ENST00000518743 EFHD1Q9BUP0 239 aa4.65□□□□□ -1.67
HMGB1P23-201ENST00000518743 THUMPD3Q9BV44 507 aaKnown RBP4.65□□□□□ -1.67
HMGB1P23-201ENST00000518743 C1QTNF5Q9BXJ0 243 aa4.65□□□□□ -1.67
HMGB1P23-201ENST00000518743 ZFP14Q9HCL3 533 aa4.65□□□□□ -1.67
HMGB1P23-201ENST00000518743 ZNF334Q9HCZ1 680 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P23-201ENST00000518743 RGS18Q9NS28 235 aa4.65□□□□□ -1.67
HMGB1P23-201ENST00000518743 STARD5Q9NSY2 213 aa4.65□□□□□ -1.67
HMGB1P23-201ENST00000518743 C5AR2Q9P296 337 aa4.65□□□□□ -1.67
HMGB1P23-201ENST00000518743 AGO2Q9UKV8 859 aaKnown RBP4.65□□□□□ -1.67
HMGB1P23-201ENST00000518743 R3HDM2Q9Y2K5 976 aaKnown RBP4.65□□□□□ -1.67
HMGB1P23-201ENST00000518743 VWA8A3KMH1 1905 aa4.65□□□□□ -1.67
HMGB1P23-201ENST00000518743 IGSF9BQ9UPX0 1349 aa4.65□□□□□ -1.67
HMGB1P23-201ENST00000518743 MYLKQ15746 1914 aa4.64□□□□□ -1.67
HMGB1P23-201ENST00000518743 NOTCH4Q99466 2003 aa4.64□□□□□ -1.67
HMGB1P23-201ENST00000518743 A0A1B0GVM2 712 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms