RNA–Protein interactions for RNA: ENST00000514313.1

NUP54-215, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-215ENST00000514313 THOC1Q96FV9 657 aaKnown RBP6.93□□□□□ -1.3
NUP54-215ENST00000514313 ABHD8Q96I13 439 aa6.93□□□□□ -1.3
NUP54-215ENST00000514313 AK8Q96MA6 479 aa6.93□□□□□ -1.3
NUP54-215ENST00000514313 C1QTNF7Q9BXJ2 289 aa6.93□□□□□ -1.3
NUP54-215ENST00000514313 SEZ6LQ9BYH1 1024 aa6.93□□□□□ -1.3
NUP54-215ENST00000514313 SLC29A3Q9BZD2 475 aa6.93□□□□□ -1.3
NUP54-215ENST00000514313 MALT1Q9UDY8 824 aa6.93□□□□□ -1.3
NUP54-215ENST00000514313 WDR83OSQ9Y284 106 aa6.93□□□□□ -1.3
NUP54-215ENST00000514313 CTAGE9A4FU28 777 aa6.92□□□□□ -1.3
NUP54-215ENST00000514313 E9PI62 339 aa6.92□□□□□ -1.3
NUP54-215ENST00000514313 KERAO60938 352 aa6.92□□□□□ -1.3
NUP54-215ENST00000514313 RTN2O75298 545 aa6.92□□□□□ -1.3
NUP54-215ENST00000514313 NME6O75414 186 aaPredicted RBP6.92□□□□□ -1.3
NUP54-215ENST00000514313 ATP6AP2O75787 350 aa6.92□□□□□ -1.3
NUP54-215ENST00000514313 PDE9AO76083 593 aa6.92□□□□□ -1.3
NUP54-215ENST00000514313 LUC7L3O95232 432 aaKnown RBP6.92□□□□□ -1.3
NUP54-215ENST00000514313 SLC16A8O95907 504 aa6.92□□□□□ -1.3
NUP54-215ENST00000514313 CTAGE8P0CG41 777 aa6.92□□□□□ -1.3
NUP54-215ENST00000514313 UROSP10746 265 aa6.92□□□□□ -1.3
NUP54-215ENST00000514313 HSPA8P11142 646 aaKnown RBP6.92□□□□□ -1.3
NUP54-215ENST00000514313 STMN1P16949 149 aa6.92□□□□□ -1.3
NUP54-215ENST00000514313 ZNF23P17027 643 aa6.92□□□□□ -1.3
NUP54-215ENST00000514313 HLA-DPA1P20036 260 aa6.92□□□□□ -1.3
NUP54-215ENST00000514313 SCP2P22307 547 aa6.92□□□□□ -1.3
NUP54-215ENST00000514313 CD27P26842 260 aa6.92□□□□□ -1.3
NUP54-215ENST00000514313 SNU13P55769 128 aaKnown RBP6.92□□□□□ -1.3
NUP54-215ENST00000514313 CLDN15P56746 228 aa6.92□□□□□ -1.3
NUP54-215ENST00000514313 SEC61A1P61619 476 aaKnown RBP6.92□□□□□ -1.3
NUP54-215ENST00000514313 SNTA1Q13424 505 aa6.92□□□□□ -1.3
NUP54-215ENST00000514313 SF3B4Q15427 424 aaKnown RBP eCLIP6.92□□□□□ -1.3
NUP54-215ENST00000514313 PTGISQ16647 500 aa6.92□□□□□ -1.3
NUP54-215ENST00000514313 DUOXA1Q1HG43 343 aa6.92□□□□□ -1.3
NUP54-215ENST00000514313 PHLDA2Q53GA4 152 aa6.92□□□□□ -1.3
NUP54-215ENST00000514313 CTAGE4Q8IX94 777 aa6.92□□□□□ -1.3
NUP54-215ENST00000514313 CLYBLQ8N0X4 340 aa6.92□□□□□ -1.3
NUP54-215ENST00000514313 TRAF4Q9BUZ4 470 aaPredicted RBP6.92□□□□□ -1.3
NUP54-215ENST00000514313 Q9H8V8 135 aa6.92□□□□□ -1.3
NUP54-215ENST00000514313 TXNDC16Q9P2K2 825 aa6.92□□□□□ -1.3
NUP54-215ENST00000514313 JRKLQ9Y4A0 524 aa6.92□□□□□ -1.3
NUP54-215ENST00000514313 PCDHGA1Q9Y5H4 931 aa6.92□□□□□ -1.3
NUP54-215ENST00000514313 CGNL1Q0VF96 1302 aa6.92□□□□□ -1.3
NUP54-215ENST00000514313 GPRASP1Q5JY77 1395 aa6.92□□□□□ -1.3
NUP54-215ENST00000514313 A0A1W2PRB8 838 aa6.91□□□□□ -1.3
NUP54-215ENST00000514313 PRAF2O60831 178 aa6.91□□□□□ -1.3
NUP54-215ENST00000514313 PLGP00747 810 aaPredicted RBP6.91□□□□□ -1.3
NUP54-215ENST00000514313 INHBAP08476 426 aa6.91□□□□□ -1.3
NUP54-215ENST00000514313 CCND3P30281 292 aaPredicted RBP6.91□□□□□ -1.3
NUP54-215ENST00000514313 CASP3P42574 277 aa6.91□□□□□ -1.3
NUP54-215ENST00000514313 PDX1P52945 283 aa6.91□□□□□ -1.3
NUP54-215ENST00000514313 RPS18P62269 152 aaKnown RBP6.91□□□□□ -1.3
NUP54-215ENST00000514313 MRPS21P82921 87 aaKnown RBP6.91□□□□□ -1.3
NUP54-215ENST00000514313 MBTD1Q05BQ5 628 aa6.91□□□□□ -1.3
NUP54-215ENST00000514313 RPA4Q13156 261 aa6.91□□□□□ -1.3
NUP54-215ENST00000514313 PKN2Q16513 984 aaKnown RBP6.91□□□□□ -1.3
NUP54-215ENST00000514313 UGT3A2Q3SY77 523 aa6.91□□□□□ -1.3
NUP54-215ENST00000514313 IQCCQ4KMZ1 466 aa6.91□□□□□ -1.3
NUP54-215ENST00000514313 C1QL2Q7Z5L3 287 aa6.91□□□□□ -1.3
NUP54-215ENST00000514313 FOXP4Q8IVH2 680 aaPredicted RBP6.91□□□□□ -1.3
NUP54-215ENST00000514313 GPALPP1Q8IXQ4 340 aa6.91□□□□□ -1.3
NUP54-215ENST00000514313 C4orf19Q8IY42 314 aa6.91□□□□□ -1.3
NUP54-215ENST00000514313 OR11H4Q8NGC9 324 aa6.91□□□□□ -1.3
NUP54-215ENST00000514313 OR8H1Q8NGG4 311 aa6.91□□□□□ -1.3
NUP54-215ENST00000514313 LILRB1Q8NHL6 650 aaPredicted RBP6.91□□□□□ -1.3
NUP54-215ENST00000514313 ELP5Q8TE02 316 aa6.91□□□□□ -1.3
NUP54-215ENST00000514313 IRGQQ8WZA9 623 aa6.91□□□□□ -1.3
NUP54-215ENST00000514313 SGK494Q96LW2 274 aa6.91□□□□□ -1.3
NUP54-215ENST00000514313 ATP6V0BQ99437 205 aa6.91□□□□□ -1.3
NUP54-215ENST00000514313 OLFML3Q9NRN5 406 aa6.91□□□□□ -1.3
NUP54-215ENST00000514313 DAPK2Q9UIK4 370 aa6.91□□□□□ -1.3
NUP54-215ENST00000514313 ACEP12821 1306 aa6.91□□□□□ -1.3
NUP54-215ENST00000514313 GH1P01241 217 aa6.9□□□□□ -1.3
NUP54-215ENST00000514313 HMOX1P09601 288 aa6.9□□□□□ -1.3
NUP54-215ENST00000514313 MYL6BP14649 208 aa6.9□□□□□ -1.3
NUP54-215ENST00000514313 CCKBRP32239 447 aa6.9□□□□□ -1.3
NUP54-215ENST00000514313 FRKP42685 505 aaPredicted RBP6.9□□□□□ -1.3
NUP54-215ENST00000514313 RPL24P83731 157 aaKnown RBP6.9□□□□□ -1.3
NUP54-215ENST00000514313 FOLH1Q04609 750 aa6.9□□□□□ -1.3
NUP54-215ENST00000514313 SPDYCQ5MJ68 293 aa6.9□□□□□ -1.3
NUP54-215ENST00000514313 PODNL1Q6PEZ8 512 aa6.9□□□□□ -1.3
NUP54-215ENST00000514313 CREB3L2Q70SY1 520 aa6.9□□□□□ -1.3
NUP54-215ENST00000514313 PIGWQ7Z7B1 504 aa6.9□□□□□ -1.3
NUP54-215ENST00000514313 MMD2Q8IY49 270 aa6.9□□□□□ -1.3
NUP54-215ENST00000514313 APCDD1Q8J025 514 aa6.9□□□□□ -1.3
NUP54-215ENST00000514313 SFRP1Q8N474 314 aa6.9□□□□□ -1.3
NUP54-215ENST00000514313 RYBPQ8N488 228 aaPredicted RBP6.9□□□□□ -1.3
NUP54-215ENST00000514313 KCNH5Q8NCM2 988 aa6.9□□□□□ -1.3
NUP54-215ENST00000514313 CENPTQ96BT3 561 aa6.9□□□□□ -1.3
NUP54-215ENST00000514313 BICD1Q96G01 975 aa6.9□□□□□ -1.3
NUP54-215ENST00000514313 PRRG4Q9BZD6 226 aa6.9□□□□□ -1.3
NUP54-215ENST00000514313 ZNF701Q9NV72 531 aaPredicted RBP6.9□□□□□ -1.3
NUP54-215ENST00000514313 CASTOR2A6NHX0 329 aa6.89□□□□□ -1.31
NUP54-215ENST00000514313 PLOD2O00469 737 aa6.89□□□□□ -1.31
NUP54-215ENST00000514313 FLRT2O43155 660 aa6.89□□□□□ -1.31
NUP54-215ENST00000514313 HTATSF1O43719 755 aaKnown RBP6.89□□□□□ -1.31
NUP54-215ENST00000514313 RNASEH1O60930 286 aaKnown RBP6.89□□□□□ -1.31
NUP54-215ENST00000514313 OLFM2O95897 454 aa6.89□□□□□ -1.31
NUP54-215ENST00000514313 PNPP00491 289 aa6.89□□□□□ -1.31
NUP54-215ENST00000514313 IRF2P14316 349 aa6.89□□□□□ -1.31
NUP54-215ENST00000514313 MNDAP41218 407 aa6.89□□□□□ -1.31
NUP54-215ENST00000514313 KHKP50053 298 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms