RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 EEF1A1P68104 462 aaKnown RBP4.58□□□□□ -1.68
HMGB3P13-201ENST00000511263 EEF1A2Q05639 463 aaKnown RBP4.58□□□□□ -1.68
HMGB3P13-201ENST00000511263 RNASELQ05823 741 aaKnown RBP4.58□□□□□ -1.68
HMGB3P13-201ENST00000511263 SLC34A1Q06495 639 aa4.58□□□□□ -1.68
HMGB3P13-201ENST00000511263 SF3A3Q12874 501 aaKnown RBP eCLIP4.58□□□□□ -1.68
HMGB3P13-201ENST00000511263 ERV3-1Q14264 604 aa4.58□□□□□ -1.68
HMGB3P13-201ENST00000511263 DLGAP5Q15398 846 aa4.58□□□□□ -1.68
HMGB3P13-201ENST00000511263 ETFDHQ16134 617 aa4.58□□□□□ -1.68
HMGB3P13-201ENST00000511263 WSCD2Q2TBF2 565 aa4.58□□□□□ -1.68
HMGB3P13-201ENST00000511263 ADCK5Q3MIX3 580 aa4.58□□□□□ -1.68
HMGB3P13-201ENST00000511263 TRIM60Q495X7 471 aa4.58□□□□□ -1.68
HMGB3P13-201ENST00000511263 GALNTL6Q49A17 601 aa4.58□□□□□ -1.68
HMGB3P13-201ENST00000511263 EEF1A1P5Q5VTE0 462 aa4.58□□□□□ -1.68
HMGB3P13-201ENST00000511263 TPGS2Q68CL5 300 aa4.58□□□□□ -1.68
HMGB3P13-201ENST00000511263 C11orf87Q6NUJ2 197 aa4.58□□□□□ -1.68
HMGB3P13-201ENST00000511263 ERICH5Q6P6B1 374 aa4.58□□□□□ -1.68
HMGB3P13-201ENST00000511263 IYDQ6PHW0 289 aa4.58□□□□□ -1.68
HMGB3P13-201ENST00000511263 MACC1Q6ZN28 852 aa4.58□□□□□ -1.68
HMGB3P13-201ENST00000511263 LRRC74BQ6ZQY2 392 aa4.58□□□□□ -1.68
HMGB3P13-201ENST00000511263 TAS2R42Q7RTR8 314 aa4.58□□□□□ -1.68
HMGB3P13-201ENST00000511263 PIGWQ7Z7B1 504 aa4.58□□□□□ -1.68
HMGB3P13-201ENST00000511263 ZNF589Q86UQ0 364 aaPredicted RBP4.58□□□□□ -1.68
HMGB3P13-201ENST00000511263 GALNT13Q8IUC8 556 aa4.58□□□□□ -1.68
HMGB3P13-201ENST00000511263 BBS7Q8IWZ6 715 aa4.58□□□□□ -1.68
HMGB3P13-201ENST00000511263 LRRC34Q8IZ02 419 aa4.58□□□□□ -1.68
HMGB3P13-201ENST00000511263 CLYBLQ8N0X4 340 aa4.58□□□□□ -1.68
HMGB3P13-201ENST00000511263 DPP10Q8N608 796 aa4.58□□□□□ -1.68
HMGB3P13-201ENST00000511263 ATG16L2Q8NAA4 619 aa4.58□□□□□ -1.68
HMGB3P13-201ENST00000511263 SLC4A11Q8NBS3 891 aa4.58□□□□□ -1.68
HMGB3P13-201ENST00000511263 SLC44A5Q8NCS7 719 aa4.58□□□□□ -1.68
HMGB3P13-201ENST00000511263 SCFD2Q8WU76 684 aa4.58□□□□□ -1.68
HMGB3P13-201ENST00000511263 UCMAQ8WVF2 138 aa4.58□□□□□ -1.68
HMGB3P13-201ENST00000511263 TRMT61AQ96FX7 289 aaKnown RBP4.58□□□□□ -1.68
HMGB3P13-201ENST00000511263 C7orf34Q96L11 122 aa4.58□□□□□ -1.68
HMGB3P13-201ENST00000511263 TMEM68Q96MH6 324 aa4.58□□□□□ -1.68
HMGB3P13-201ENST00000511263 ZNF778Q96MU6 729 aa4.58□□□□□ -1.68
HMGB3P13-201ENST00000511263 ZNF578Q96N58 590 aaPredicted RBP4.58□□□□□ -1.68
HMGB3P13-201ENST00000511263 SLC29A1Q99808 456 aa4.58□□□□□ -1.68
HMGB3P13-201ENST00000511263 TM2D2Q9BX73 214 aa4.58□□□□□ -1.68
HMGB3P13-201ENST00000511263 NAPBQ9H115 298 aa4.58□□□□□ -1.68
HMGB3P13-201ENST00000511263 XKR8Q9H6D3 395 aa4.58□□□□□ -1.68
HMGB3P13-201ENST00000511263 CAB39LQ9H9S4 337 aa4.58□□□□□ -1.68
HMGB3P13-201ENST00000511263 LY9Q9HBG7 655 aa4.58□□□□□ -1.68
HMGB3P13-201ENST00000511263 TMBIM4Q9HC24 238 aa4.58□□□□□ -1.68
HMGB3P13-201ENST00000511263 FSCN3Q9NQT6 498 aa4.58□□□□□ -1.68
HMGB3P13-201ENST00000511263 GIMAP4Q9NUV9 329 aa4.58□□□□□ -1.68
HMGB3P13-201ENST00000511263 POT1Q9NUX5 634 aa4.58□□□□□ -1.68
HMGB3P13-201ENST00000511263 DNAJC17Q9NVM6 304 aaKnown RBP4.58□□□□□ -1.68
HMGB3P13-201ENST00000511263 MTMR4Q9NYA4 1195 aa4.58□□□□□ -1.68
HMGB3P13-201ENST00000511263 GGA3Q9NZ52 723 aa4.58□□□□□ -1.68
HMGB3P13-201ENST00000511263 LRFN1Q9P244 771 aa4.58□□□□□ -1.68
HMGB3P13-201ENST00000511263 IGSF9Q9P2J2 1179 aa4.58□□□□□ -1.68
HMGB3P13-201ENST00000511263 MTRRQ9UBK8 725 aa4.58□□□□□ -1.68
HMGB3P13-201ENST00000511263 GRHPRQ9UBQ7 328 aa4.58□□□□□ -1.68
HMGB3P13-201ENST00000511263 STOML2Q9UJZ1 356 aa4.58□□□□□ -1.68
HMGB3P13-201ENST00000511263 RCOR1Q9UKL0 485 aa4.58□□□□□ -1.68
HMGB3P13-201ENST00000511263 SPATA2Q9UM82 520 aa4.58□□□□□ -1.68
HMGB3P13-201ENST00000511263 NIP7Q9Y221 180 aaKnown RBP eCLIP4.58□□□□□ -1.68
HMGB3P13-201ENST00000511263 ERGIC3Q9Y282 383 aa4.58□□□□□ -1.68
HMGB3P13-201ENST00000511263 DERAQ9Y315 318 aa4.58□□□□□ -1.68
HMGB3P13-201ENST00000511263 CSNK1G3Q9Y6M4 447 aa4.58□□□□□ -1.68
HMGB3P13-201ENST00000511263 ADAMTS7Q9UKP4 1686 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 ADCY9O60503 1353 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 FLT1P17948 1338 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 CYP3A7-CYP3A51PA0A087WV96 503 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 OR6C74A6NCV1 312 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 CCDC160A6NGH7 325 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 ACOD1A6NK06 481 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 PCP4L1A6NKN8 68 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 C2CD4BA6NLJ0 364 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 SIGLEC16A6NMB1 481 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 LGALS16A8MUM7 142 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 C2orf74A8MZ97 194 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 ATP6V1G2-DDX39BF2Z307 99 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 H0Y626 953 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 WRBO00258 174 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 RRHO14718 337 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 RASGRF2O14827 1237 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 SEPT4O43236 478 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 PI15O43692 258 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 SURF6O75683 361 aaKnown RBP4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 RPP40O75818 363 aaKnown RBP4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 SNAP29O95721 258 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 WDPCPO95876 746 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 TOP3BO95985 862 aaKnown RBP4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 CALB1P05937 261 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 HSMCR30P0CW71 290 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 ACTN1P12814 892 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 ST6GAL1P15907 406 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 GJA1P17302 382 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 CYP3A7P24462 503 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 HOXA7P31268 230 aaPredicted RBP4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 SHMT1P34896 483 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 SERPINF1P36955 418 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 TALDO1P37837 337 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 HADHAP40939 763 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 HNF4AP41235 474 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 ALDH7A1P49419 539 aaKnown RBP4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 AIF1P55008 147 aa4.57□□□□□ -1.68
HMGB3P13-201ENST00000511263 PEX3P56589 373 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 126.5 ms