RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 ITPKAP23677 461 aa12.08□□□□□ -0.48
USP11-206ENST00000469080 CD70P32970 193 aa12.08□□□□□ -0.48
USP11-206ENST00000469080 IL2P60568 153 aa12.08□□□□□ -0.48
USP11-206ENST00000469080 MTX3Q5HYI7 312 aa12.08□□□□□ -0.48
USP11-206ENST00000469080 OTUD3Q5T2D3 398 aaPredicted RBP12.08□□□□□ -0.48
USP11-206ENST00000469080 ZFP1Q6P2D0 407 aa12.08□□□□□ -0.48
USP11-206ENST00000469080 KIAA0408Q6ZU52 694 aa12.08□□□□□ -0.48
USP11-206ENST00000469080 LIMS2Q7Z4I7 341 aa12.08□□□□□ -0.48
USP11-206ENST00000469080 SLCO6A1Q86UG4 719 aa12.08□□□□□ -0.48
USP11-206ENST00000469080 PPM1MQ96MI6 270 aa12.08□□□□□ -0.48
USP11-206ENST00000469080 USB1Q9BQ65 265 aaKnown RBP12.08□□□□□ -0.48
USP11-206ENST00000469080 NOL11Q9H8H0 719 aaKnown RBP12.08□□□□□ -0.48
USP11-206ENST00000469080 THG1LQ9NWX6 298 aaKnown RBP12.08□□□□□ -0.48
USP11-206ENST00000469080 PSME2Q9UL46 239 aa12.08□□□□□ -0.48
USP11-206ENST00000469080 GRXCR1A8MXD5 290 aa12.07□□□□□ -0.48
USP11-206ENST00000469080 GRID2O43424 1007 aa12.07□□□□□ -0.48
USP11-206ENST00000469080 ITGALP20701 1170 aa12.07□□□□□ -0.48
USP11-206ENST00000469080 DOK6Q6PKX4 331 aa12.07□□□□□ -0.48
USP11-206ENST00000469080 SLC22A15Q8IZD6 547 aa12.07□□□□□ -0.48
USP11-206ENST00000469080 MED8Q96G25 268 aa12.07□□□□□ -0.48
USP11-206ENST00000469080 PKMYT1Q99640 499 aa12.07□□□□□ -0.48
USP11-206ENST00000469080 IFT22Q9H7X7 185 aa12.07□□□□□ -0.48
USP11-206ENST00000469080 ZFYVE1Q9HBF4 777 aa12.07□□□□□ -0.48
USP11-206ENST00000469080 FAM25AB3EWG3 89 aa12.07□□□□□ -0.48
USP11-206ENST00000469080 FAM25CB3EWG5 89 aa12.07□□□□□ -0.48
USP11-206ENST00000469080 FAM25GB3EWG6 89 aa12.07□□□□□ -0.48
USP11-206ENST00000469080 NOS1APO75052 506 aaPredicted RBP12.07□□□□□ -0.48
USP11-206ENST00000469080 AOC1P19801 751 aa12.07□□□□□ -0.48
USP11-206ENST00000469080 HLA-DPA1P20036 260 aa12.07□□□□□ -0.48
USP11-206ENST00000469080 HOXC8P31273 242 aa12.07□□□□□ -0.48
USP11-206ENST00000469080 TPD52P55327 224 aaPredicted RBP12.07□□□□□ -0.48
USP11-206ENST00000469080 PSME3P61289 254 aa12.07□□□□□ -0.48
USP11-206ENST00000469080 DBPQ10586 325 aaPredicted RBP12.07□□□□□ -0.48
USP11-206ENST00000469080 ABRQ12979 859 aa12.07□□□□□ -0.48
USP11-206ENST00000469080 NFYCQ13952 458 aa12.07□□□□□ -0.48
USP11-206ENST00000469080 AAK1Q2M2I8 961 aa12.07□□□□□ -0.48
USP11-206ENST00000469080 RETSATQ6NUM9 610 aa12.07□□□□□ -0.48
USP11-206ENST00000469080 ZNF549Q6P9A3 640 aa12.07□□□□□ -0.48
USP11-206ENST00000469080 EPGNQ6UW88 154 aa12.07□□□□□ -0.48
USP11-206ENST00000469080 SERPINA9Q86WD7 417 aa12.07□□□□□ -0.48
USP11-206ENST00000469080 CARM1Q86X55 608 aa12.07□□□□□ -0.48
USP11-206ENST00000469080 CPA6Q8N4T0 437 aa12.07□□□□□ -0.48
USP11-206ENST00000469080 OR52B6Q8NGF0 335 aa12.07□□□□□ -0.48
USP11-206ENST00000469080 TWIST2Q8WVJ9 160 aa12.07□□□□□ -0.48
USP11-206ENST00000469080 LRTOMTQ8WZ04 291 aa12.07□□□□□ -0.48
USP11-206ENST00000469080 ST8SIA2Q92186 375 aa12.07□□□□□ -0.48
USP11-206ENST00000469080 TMEM74Q96NL1 305 aa12.07□□□□□ -0.48
USP11-206ENST00000469080 AKTIPQ9H8T0 292 aa12.07□□□□□ -0.48
USP11-206ENST00000469080 MTRRQ9UBK8 725 aa12.07□□□□□ -0.48
USP11-206ENST00000469080 MAN2B2Q9Y2E5 1009 aa12.07□□□□□ -0.48
USP11-206ENST00000469080 USP34Q70CQ2 3546 aa12.07□□□□□ -0.48
USP11-206ENST00000469080 SCN10AQ9Y5Y9 1956 aa12.07□□□□□ -0.48
USP11-206ENST00000469080 LOC285556D6RIA3 1793 aa12.07□□□□□ -0.48
USP11-206ENST00000469080 TRPC5OSA6NMA1 111 aa12.07□□□□□ -0.48
USP11-206ENST00000469080 E7ENX8 843 aa12.07□□□□□ -0.48
USP11-206ENST00000469080 ECI2O75521 394 aa12.07□□□□□ -0.48
USP11-206ENST00000469080 TIPRLO75663 272 aa12.07□□□□□ -0.48
USP11-206ENST00000469080 MMP2P08253 660 aa12.07□□□□□ -0.48
USP11-206ENST00000469080 PKMP14618 531 aaKnown RBP12.07□□□□□ -0.48
USP11-206ENST00000469080 MYOGP15173 224 aa12.07□□□□□ -0.48
USP11-206ENST00000469080 CDH4P55283 916 aa12.07□□□□□ -0.48
USP11-206ENST00000469080 SH3BP2P78314 561 aa12.07□□□□□ -0.48
USP11-206ENST00000469080 ZNF267Q14586 743 aaPredicted RBP12.07□□□□□ -0.48
USP11-206ENST00000469080 GPNMBQ14956 572 aa12.07□□□□□ -0.48
USP11-206ENST00000469080 ANKRD46Q86W74 232 aa12.07□□□□□ -0.48
USP11-206ENST00000469080 OFCC1Q8IZS5 231 aa12.07□□□□□ -0.48
USP11-206ENST00000469080 FOXJ1Q92949 421 aa12.07□□□□□ -0.48
USP11-206ENST00000469080 KLHL32Q96NJ5 620 aa12.07□□□□□ -0.48
USP11-206ENST00000469080 EFHD1Q9BUP0 239 aa12.07□□□□□ -0.48
USP11-206ENST00000469080 PRKAB1Q9Y478 270 aa12.07□□□□□ -0.48
USP11-206ENST00000469080 INSL5Q9Y5Q6 135 aa12.07□□□□□ -0.48
USP11-206ENST00000469080 TDRD15B5MCY1 1934 aaKnown RBP12.07□□□□□ -0.48
USP11-206ENST00000469080 ZNF487B1APH4 448 aa12.06□□□□□ -0.48
USP11-206ENST00000469080 TRIM77I1YAP6 450 aa12.06□□□□□ -0.48
USP11-206ENST00000469080 AZIN1O14977 448 aa12.06□□□□□ -0.48
USP11-206ENST00000469080 PDPK1O15530 556 aa12.06□□□□□ -0.48
USP11-206ENST00000469080 CPNE3O75131 537 aaKnown RBP12.06□□□□□ -0.48
USP11-206ENST00000469080 FGF18O76093 207 aa12.06□□□□□ -0.48
USP11-206ENST00000469080 CLEC2LP0C7M8 214 aa12.06□□□□□ -0.48
USP11-206ENST00000469080 HLA-EP13747 358 aa12.06□□□□□ -0.48
USP11-206ENST00000469080 ZNF26P17031 533 aaPredicted RBP12.06□□□□□ -0.48
USP11-206ENST00000469080 HOXD9P28356 352 aaPredicted RBP12.06□□□□□ -0.48
USP11-206ENST00000469080 DGKQP52824 942 aa12.06□□□□□ -0.48
USP11-206ENST00000469080 LSM3P62310 102 aaKnown RBP12.06□□□□□ -0.48
USP11-206ENST00000469080 NAB1Q13506 487 aa12.06□□□□□ -0.48
USP11-206ENST00000469080 SULT1C3Q6IMI6 304 aa12.06□□□□□ -0.48
USP11-206ENST00000469080 FAM45BPQ6NSW5 357 aa12.06□□□□□ -0.48
USP11-206ENST00000469080 SZRD1Q7Z422 152 aa12.06□□□□□ -0.48
USP11-206ENST00000469080 ADCK1Q86TW2 530 aa12.06□□□□□ -0.48
USP11-206ENST00000469080 TMEM25Q86YD3 366 aa12.06□□□□□ -0.48
USP11-206ENST00000469080 FAM45AQ8TCE6 357 aa12.06□□□□□ -0.48
USP11-206ENST00000469080 C19orf60Q96EN9 201 aa12.06□□□□□ -0.48
USP11-206ENST00000469080 NRBF2Q96F24 287 aa12.06□□□□□ -0.48
USP11-206ENST00000469080 THUMPD3Q9BV44 507 aaKnown RBP12.06□□□□□ -0.48
USP11-206ENST00000469080 NSUN3Q9H649 340 aaKnown RBP12.06□□□□□ -0.48
USP11-206ENST00000469080 ANKRD6Q9Y2G4 727 aa12.06□□□□□ -0.48
USP11-206ENST00000469080 A0A087X1B8 175 aa12.06□□□□□ -0.48
USP11-206ENST00000469080 C16orf96A6NNT2 1141 aa12.06□□□□□ -0.48
USP11-206ENST00000469080 HIDE1A8MVS5 230 aa12.06□□□□□ -0.48
USP11-206ENST00000469080 AGRPO00253 132 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 119.8 ms