RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 MAP3K14Q99558 947 aa16.1■□□□□ 0.17
PTCH1-201ENST00000331920 HTR3EA5X5Y0 456 aa16.1■□□□□ 0.17
PTCH1-201ENST00000331920 FGF1P05230 155 aa16.1■□□□□ 0.17
PTCH1-201ENST00000331920 COL6A2P12110 1019 aa16.1■□□□□ 0.17
PTCH1-201ENST00000331920 CCDC58Q4VC31 144 aa16.1■□□□□ 0.17
PTCH1-201ENST00000331920 EVLQ9UI08 416 aaPredicted RBP16.1■□□□□ 0.17
PTCH1-201ENST00000331920 LCKP06239 509 aa16.1■□□□□ 0.17
PTCH1-201ENST00000331920 RIT1Q92963 219 aa16.1■□□□□ 0.17
PTCH1-201ENST00000331920 KCTD7Q96MP8 289 aa16.1■□□□□ 0.17
PTCH1-201ENST00000331920 IPPKQ9H8X2 491 aa16.1■□□□□ 0.17
PTCH1-201ENST00000331920 MAN2C1Q9NTJ4 1040 aa16.1■□□□□ 0.17
PTCH1-201ENST00000331920 BORCS7-ASMTA0A0B4J1R7 106 aa16.1■□□□□ 0.17
PTCH1-201ENST00000331920 AIPO00170 330 aa16.1■□□□□ 0.17
PTCH1-201ENST00000331920 CLN5O75503 358 aa16.1■□□□□ 0.17
PTCH1-201ENST00000331920 ASLP04424 464 aa16.1■□□□□ 0.17
PTCH1-201ENST00000331920 IFNGR1P15260 489 aa16.1■□□□□ 0.17
PTCH1-201ENST00000331920 LAPTM5Q13571 262 aa16.1■□□□□ 0.17
PTCH1-201ENST00000331920 MFSD13AQ14CX5 517 aa16.1■□□□□ 0.17
PTCH1-201ENST00000331920 OTOP3Q7RTS5 596 aa16.1■□□□□ 0.17
PTCH1-201ENST00000331920 TMEM110Q86TL2 294 aa16.1■□□□□ 0.17
PTCH1-201ENST00000331920 BORCS7Q96B45 105 aa16.1■□□□□ 0.17
PTCH1-201ENST00000331920 RNF157Q96PX1 679 aa16.1■□□□□ 0.17
PTCH1-201ENST00000331920 ZNF717Q9BY31 904 aaPredicted RBP16.1■□□□□ 0.17
PTCH1-201ENST00000331920 TMEM185BQ9H7F4 350 aa16.1■□□□□ 0.17
PTCH1-201ENST00000331920 GIN1Q9NXP7 522 aa16.1■□□□□ 0.17
PTCH1-201ENST00000331920 SHROOM2Q13796 1616 aa16.1■□□□□ 0.17
PTCH1-201ENST00000331920 A0A1W2PPM1 405 aa16.1■□□□□ 0.17
PTCH1-201ENST00000331920 ADAMTS3O15072 1205 aa16.1■□□□□ 0.17
PTCH1-201ENST00000331920 PLATP00750 562 aa16.1■□□□□ 0.17
PTCH1-201ENST00000331920 UGT1A3P35503 534 aa16.1■□□□□ 0.17
PTCH1-201ENST00000331920 SELENOVP59797 346 aa16.1■□□□□ 0.17
PTCH1-201ENST00000331920 HEPACAMQ14CZ8 416 aa16.1■□□□□ 0.17
PTCH1-201ENST00000331920 CRB2Q5IJ48 1285 aa16.1■□□□□ 0.17
PTCH1-201ENST00000331920 LRRC66Q68CR7 880 aa16.1■□□□□ 0.17
PTCH1-201ENST00000331920 STYK1Q6J9G0 422 aa16.1■□□□□ 0.17
PTCH1-201ENST00000331920 FOXR2Q6PJQ5 311 aa16.1■□□□□ 0.17
PTCH1-201ENST00000331920 MFSD2AQ8NA29 543 aa16.1■□□□□ 0.17
PTCH1-201ENST00000331920 PDPRQ8NCN5 879 aa16.1■□□□□ 0.17
PTCH1-201ENST00000331920 NDRG1Q92597 394 aaKnown RBP16.1■□□□□ 0.17
PTCH1-201ENST00000331920 C7orf50Q9BRJ6 194 aaKnown RBP16.1■□□□□ 0.17
PTCH1-201ENST00000331920 ACKR2O00590 384 aa16.09■□□□□ 0.17
PTCH1-201ENST00000331920 MRPS6P82932 125 aaKnown RBP16.09■□□□□ 0.17
PTCH1-201ENST00000331920 NFATC2Q13469 925 aa16.09■□□□□ 0.17
PTCH1-201ENST00000331920 ATAD1Q8NBU5 361 aa16.09■□□□□ 0.17
PTCH1-201ENST00000331920 STK35Q8TDR2 534 aa16.09■□□□□ 0.17
PTCH1-201ENST00000331920 UROC1Q96N76 676 aa16.09■□□□□ 0.17
PTCH1-201ENST00000331920 ZNF701Q9NV72 531 aaPredicted RBP16.09■□□□□ 0.17
PTCH1-201ENST00000331920 PCTPQ9UKL6 214 aa16.09■□□□□ 0.17
PTCH1-201ENST00000331920 PCDHGB1Q9Y5G3 927 aa16.09■□□□□ 0.17
PTCH1-201ENST00000331920 B4DGG1 531 aa16.09■□□□□ 0.17
PTCH1-201ENST00000331920 RP2O75695 350 aa16.09■□□□□ 0.17
PTCH1-201ENST00000331920 CORO1AP31146 461 aaKnown RBP16.09■□□□□ 0.17
PTCH1-201ENST00000331920 CDK18Q07002 472 aa16.09■□□□□ 0.17
PTCH1-201ENST00000331920 HIF1ANQ9NWT6 349 aa16.09■□□□□ 0.17
PTCH1-201ENST00000331920 CORO1CQ9ULV4 474 aaPredicted RBP16.09■□□□□ 0.17
PTCH1-201ENST00000331920 A0A0A6YYH2 397 aa16.09■□□□□ 0.17
PTCH1-201ENST00000331920 A6NJ64 397 aa16.09■□□□□ 0.17
PTCH1-201ENST00000331920 BLOC1S5-TXNDC5H3BN57 136 aa16.09■□□□□ 0.17
PTCH1-201ENST00000331920 LCN1P31025 176 aa16.09■□□□□ 0.17
PTCH1-201ENST00000331920 TSGA10IPQ3SY00 556 aa16.09■□□□□ 0.17
PTCH1-201ENST00000331920 ARL8BQ9NVJ2 186 aa16.09■□□□□ 0.17
PTCH1-201ENST00000331920 FBXO5Q9UKT4 447 aa16.09■□□□□ 0.17
PTCH1-201ENST00000331920 MAGI2Q86UL8 1455 aa16.09■□□□□ 0.17
PTCH1-201ENST00000331920 WDPCPO95876 746 aa16.09■□□□□ 0.17
PTCH1-201ENST00000331920 TIE1P35590 1138 aa16.09■□□□□ 0.17
PTCH1-201ENST00000331920 CLCN4P51793 760 aa16.09■□□□□ 0.17
PTCH1-201ENST00000331920 TMEM214Q6NUQ4 689 aaKnown RBP16.09■□□□□ 0.17
PTCH1-201ENST00000331920 DPAGT1Q9H3H5 408 aa16.09■□□□□ 0.17
PTCH1-201ENST00000331920 ZNF510Q9Y2H8 683 aa16.09■□□□□ 0.17
PTCH1-201ENST00000331920 C2orf74A8MZ97 194 aa16.09■□□□□ 0.17
PTCH1-201ENST00000331920 GLUD1P00367 558 aa16.09■□□□□ 0.17
PTCH1-201ENST00000331920 GPR21Q99679 349 aa16.09■□□□□ 0.17
PTCH1-201ENST00000331920 EBNA1BP2Q99848 306 aaKnown RBP16.09■□□□□ 0.17
PTCH1-201ENST00000331920 ABHD16BQ9H3Z7 469 aa16.09■□□□□ 0.17
PTCH1-201ENST00000331920 DKKL1Q9UK85 242 aa16.09■□□□□ 0.17
PTCH1-201ENST00000331920 TNFRSF10BO14763 440 aa16.09■□□□□ 0.17
PTCH1-201ENST00000331920 SPAM1P38567 509 aa16.09■□□□□ 0.17
PTCH1-201ENST00000331920 GRIA1P42261 906 aa16.09■□□□□ 0.17
PTCH1-201ENST00000331920 GLP1RP43220 463 aa16.09■□□□□ 0.17
PTCH1-201ENST00000331920 BDH1Q02338 343 aa16.09■□□□□ 0.17
PTCH1-201ENST00000331920 OR8K3Q8NH51 312 aa16.09■□□□□ 0.17
PTCH1-201ENST00000331920 SNIP1Q8TAD8 396 aaKnown RBP16.09■□□□□ 0.17
PTCH1-201ENST00000331920 RAI2Q9Y5P3 530 aa16.09■□□□□ 0.17
PTCH1-201ENST00000331920 ANKRD63C9JTQ0 380 aa16.08■□□□□ 0.17
PTCH1-201ENST00000331920 DGKEP52429 567 aa16.08■□□□□ 0.17
PTCH1-201ENST00000331920 MPP1Q00013 466 aa16.08■□□□□ 0.17
PTCH1-201ENST00000331920 CHIT1Q13231 466 aa16.08■□□□□ 0.17
PTCH1-201ENST00000331920 DAGLBQ8NCG7 672 aa16.08■□□□□ 0.17
PTCH1-201ENST00000331920 MTERF1Q99551 399 aaKnown RBP16.08■□□□□ 0.17
PTCH1-201ENST00000331920 RPP40O75818 363 aaKnown RBP16.08■□□□□ 0.17
PTCH1-201ENST00000331920 CD53P19397 219 aa16.08■□□□□ 0.17
PTCH1-201ENST00000331920 MTPNP58546 118 aa16.08■□□□□ 0.17
PTCH1-201ENST00000331920 SEMG2Q02383 582 aa16.08■□□□□ 0.17
PTCH1-201ENST00000331920 MAP1SQ66K74 1059 aaPredicted RBP16.08■□□□□ 0.17
PTCH1-201ENST00000331920 TRAPPC6BQ86SZ2 158 aa16.08■□□□□ 0.17
PTCH1-201ENST00000331920 TIGD4Q8IY51 512 aa16.08■□□□□ 0.17
PTCH1-201ENST00000331920 PLA2G15Q8NCC3 412 aa16.08■□□□□ 0.17
PTCH1-201ENST00000331920 AGBL3Q8NEM8 1001 aa16.08■□□□□ 0.17
PTCH1-201ENST00000331920 AENQ8WTP8 325 aaKnown RBP16.08■□□□□ 0.17
PTCH1-201ENST00000331920 HERVK_113Q902F9 699 aa16.08■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms