RNA–Protein interactions for RNA: YDL172C

YDL172C, Transcript of Dubious open reading frame, yeastyeast

Gene YDL172C, Length 480 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDL172CYDL172C BOI2P39969 1040 aa7.05□□□□□ -1.28
YDL172CYDL172C RTP1Q12751 981 aa7.05□□□□□ -1.28
YDL172CYDL172C PRE8P23639 250 aa7.04□□□□□ -1.28
YDL172CYDL172C RDH54P38086 958 aa7.04□□□□□ -1.28
YDL172CYDL172C VPS53P47061 822 aa7.04□□□□□ -1.28
YDL172CYDL172C YNL193WP53870 558 aa7.04□□□□□ -1.28
YDL172CYDL172C ALD6P54115 500 aaKnown RBP7.04□□□□□ -1.28
YDL172CYDL172C FAB1P34756 2278 aa7.04□□□□□ -1.28
YDL172CYDL172C RPP0P05317 312 aaKnown RBP7.03□□□□□ -1.28
YDL172CYDL172C UTR4P32626 227 aa7.03□□□□□ -1.28
YDL172CYDL172C SLA1P32790 1244 aa7.03□□□□□ -1.28
YDL172CYDL172C MKS1P34072 584 aa7.03□□□□□ -1.28
YDL172CYDL172C MDJ1P35191 511 aa7.03□□□□□ -1.28
YDL172CYDL172C GPT2P36148 743 aa7.03□□□□□ -1.28
YDL172CYDL172C DAK1P54838 584 aaKnown RBP7.03□□□□□ -1.28
YDL172CYDL172C DFG5Q05031 458 aa7.03□□□□□ -1.28
YDL172CYDL172C OYE3P41816 400 aaPredicted RBP7.02□□□□□ -1.29
YDL172CYDL172C YPP1P46951 817 aa7.02□□□□□ -1.29
YDL172CYDL172C SOL4P53315 255 aa7.02□□□□□ -1.29
YDL172CYDL172C POX1P13711 748 aa7.01□□□□□ -1.29
YDL172CYDL172C SRM1P21827 482 aa7.01□□□□□ -1.29
YDL172CYDL172C TIM23P32897 222 aa7.01□□□□□ -1.29
YDL172CYDL172C GRX7P38068 203 aa7.01□□□□□ -1.29
YDL172CYDL172C SLD5Q03406 294 aa7.01□□□□□ -1.29
YDL172CYDL172C RPN7Q06103 429 aaKnown RBP7.01□□□□□ -1.29
YDL172CYDL172C YPL260WQ08977 551 aa7.01□□□□□ -1.29
YDL172CYDL172C LAM4P38800 1345 aa7.01□□□□□ -1.29
YDL172CYDL172C IDI1P15496 288 aa7□□□□□ -1.29
YDL172CYDL172C POT1P27796 417 aaKnown RBP RIP-Chip data7□□□□□ -1.29not detected
YDL172CYDL172C NUM1Q00402 2748 aa7□□□□□ -1.29
YDL172CYDL172C RAD18P10862 487 aa6.99□□□□□ -1.29
YDL172CYDL172C YUR1P26725 428 aa6.99□□□□□ -1.29
YDL172CYDL172C MCM4P30665 933 aaKnown RBP6.99□□□□□ -1.29
YDL172CYDL172C GUA1P38625 525 aaKnown RBP6.99□□□□□ -1.29
YDL172CYDL172C BRL1P38770 471 aa6.99□□□□□ -1.29
YDL172CYDL172C SSF1P38789 453 aaPredicted RBP6.99□□□□□ -1.29
YDL172CYDL172C FIG4P42837 879 aa6.99□□□□□ -1.29
YDL172CYDL172C SGM1P47166 707 aa6.99□□□□□ -1.29
YDL172CYDL172C ART5P53244 586 aaKnown RBP6.99□□□□□ -1.29
YDL172CYDL172C YNR021WP53723 404 aaKnown RBP6.99□□□□□ -1.29
YDL172CYDL172C VPS72Q03388 795 aa6.99□□□□□ -1.29
YDL172CYDL172C YDL144CQ07589 356 aa6.99□□□□□ -1.29
YDL172CYDL172C ISA1Q07821 250 aaPredicted RBP6.99□□□□□ -1.29
YDL172CYDL172C BDS1Q08347 646 aa6.99□□□□□ -1.29
YDL172CYDL172C PHR1P05066 565 aaKnown RBP RIP-Chip data6.98□□□□□ -1.29not detected
YDL172CYDL172C SPT2P06843 333 aaPredicted RBP6.98□□□□□ -1.29
YDL172CYDL172C DAL5P15365 543 aa6.98□□□□□ -1.29
YDL172CYDL172C GEF1P37020 779 aa6.98□□□□□ -1.29
YDL172CYDL172C POA1P38218 177 aa6.98□□□□□ -1.29
YDL172CYDL172C NAM8Q00539 523 aaKnown RBP6.98□□□□□ -1.29
YDL172CYDL172C PKH3Q03306 898 aaPredicted RBP6.98□□□□□ -1.29
YDL172CYDL172C SKG3Q06315 1026 aa6.98□□□□□ -1.29
YDL172CYDL172C SWI6P09959 803 aa6.97□□□□□ -1.29
YDL172CYDL172C CAD1P24813 409 aaKnown RBP6.97□□□□□ -1.29
YDL172CYDL172C TFC4P33339 1025 aa6.97□□□□□ -1.29
YDL172CYDL172C CSI1Q04368 295 aa6.97□□□□□ -1.29
YDL172CYDL172C RAD59Q12223 238 aa6.97□□□□□ -1.29
YDL172CYDL172C TRM11Q12463 433 aa6.97□□□□□ -1.29
YDL172CYDL172C SAM1P10659 382 aaKnown RBP6.96□□□□□ -1.3
YDL172CYDL172C SNA3P14359 133 aa6.96□□□□□ -1.3
YDL172CYDL172C SCS3P53012 380 aa6.96□□□□□ -1.3
YDL172CYDL172C YGL039WP53183 348 aaKnown RBP6.96□□□□□ -1.3
YDL172CYDL172C ERP3Q12403 225 aa6.96□□□□□ -1.3
YDL172CYDL172C RPS19AP07280 144 aaKnown RBP6.95□□□□□ -1.3
YDL172CYDL172C RPS19BP07281 144 aaPredicted RBP6.95□□□□□ -1.3
YDL172CYDL172C FBP26P32604 452 aa6.95□□□□□ -1.3
YDL172CYDL172C SEC8P32855 1065 aa6.95□□□□□ -1.3
YDL172CYDL172C FMP10P40098 244 aa6.95□□□□□ -1.3
YDL172CYDL172C VTC4P47075 721 aa6.95□□□□□ -1.3
YDL172CYDL172C EMI2Q04409 500 aaKnown RBP6.95□□□□□ -1.3
YDL172CYDL172C YDR461C-AQ2V2P7 80 aa6.95□□□□□ -1.3
YDL172CYDL172C MYO1P08964 1928 aa6.95□□□□□ -1.3
YDL172CYDL172C AI1P03875 834 aa6.94□□□□□ -1.3
YDL172CYDL172C SYN8P31377 255 aa6.94□□□□□ -1.3
YDL172CYDL172C DUR3P33413 735 aa6.94□□□□□ -1.3
YDL172CYDL172C TGL1P34163 548 aa6.94□□□□□ -1.3
YDL172CYDL172C ALD5P40047 520 aaKnown RBP6.94□□□□□ -1.3
YDL172CYDL172C AZR1P50080 613 aa6.94□□□□□ -1.3
YDL172CYDL172C THI72Q08579 599 aa6.94□□□□□ -1.3
YDL172CYDL172C POL3P15436 1097 aa6.93□□□□□ -1.3
YDL172CYDL172C KTR1P27810 393 aaKnown RBP6.93□□□□□ -1.3
YDL172CYDL172C SHP1P34223 423 aa6.93□□□□□ -1.3
YDL172CYDL172C PHO88P38264 188 aaPredicted RBP6.93□□□□□ -1.3
YDL172CYDL172C SPO74P45819 413 aa6.93□□□□□ -1.3
YDL172CYDL172C HEH2Q03281 663 aa6.93□□□□□ -1.3
YDL172CYDL172C SPH1Q06160 661 aa6.93□□□□□ -1.3
YDL172CYDL172C STE6P12866 1290 aa6.92□□□□□ -1.3
YDL172CYDL172C SAM2P19358 384 aaKnown RBP6.92□□□□□ -1.3
YDL172CYDL172C TKL1P23254 680 aaKnown RBP6.92□□□□□ -1.3
YDL172CYDL172C URK1P27515 501 aa6.92□□□□□ -1.3
YDL172CYDL172C MCR1P36060 302 aaKnown RBP6.92□□□□□ -1.3
YDL172CYDL172C DBP7P36120 742 aaKnown RBP6.92□□□□□ -1.3
YDL172CYDL172C IOC3P43596 787 aa6.92□□□□□ -1.3
YDL172CYDL172C POL32P47110 350 aa6.92□□□□□ -1.3
YDL172CYDL172C INP52P50942 1183 aa6.92□□□□□ -1.3
YDL172CYDL172C NRD1P53617 575 aaKnown RBP RIP-Chip data6.92□□□□□ -1.3not detected
YDL172CYDL172C YNL034WP53963 612 aa6.92□□□□□ -1.3
YDL172CYDL172C YNL018CP53976 612 aa6.92□□□□□ -1.3
YDL172CYDL172C DUS3Q06053 668 aaKnown RBP6.92□□□□□ -1.3
YDL172CYDL172C MOT1P32333 1867 aa6.92□□□□□ -1.3
Retrieved 100 of 5,963 RNA–protein pairs in 104.1 ms