RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 ANKRD24Q8TF21 1146 aa14.83□□□□□ -0.04
LINC00538-201ENST00000626109 LTV1Q96GA3 475 aaPredicted RBP14.83□□□□□ -0.04
LINC00538-201ENST00000626109 NGLY1Q96IV0 654 aa14.83□□□□□ -0.04
LINC00538-201ENST00000626109 BTG4Q9NY30 223 aa14.83□□□□□ -0.04
LINC00538-201ENST00000626109 PLCH1Q4KWH8 1693 aa14.83□□□□□ -0.04
LINC00538-201ENST00000626109 CAMTA1Q9Y6Y1 1673 aa14.83□□□□□ -0.04
LINC00538-201ENST00000626109 A6NJR5 290 aa14.82□□□□□ -0.04
LINC00538-201ENST00000626109 EIF4A2Q14240 407 aaKnown RBP14.82□□□□□ -0.04
LINC00538-201ENST00000626109 NAP1L2Q9ULW6 460 aaPredicted RBP14.82□□□□□ -0.04
LINC00538-201ENST00000626109 LAS1LQ9Y4W2 734 aaKnown RBP14.82□□□□□ -0.04
LINC00538-201ENST00000626109 ERBB3P21860 1342 aa14.82□□□□□ -0.04
LINC00538-201ENST00000626109 COL5A2P05997 1499 aaPredicted RBP14.82□□□□□ -0.04
LINC00538-201ENST00000626109 CSB-PGBD3P0DP91 1061 aa14.82□□□□□ -0.04
LINC00538-201ENST00000626109 EVA1CP58658 441 aa14.82□□□□□ -0.04
LINC00538-201ENST00000626109 ILDR1Q86SU0 546 aaPredicted RBP14.82□□□□□ -0.04
LINC00538-201ENST00000626109 SECISBP2LQ93073 1101 aaKnown RBP14.82□□□□□ -0.04
LINC00538-201ENST00000626109 SLIT2O94813 1529 aa14.81□□□□□ -0.04
LINC00538-201ENST00000626109 MSH5O43196 834 aa14.81□□□□□ -0.04
LINC00538-201ENST00000626109 RGPD5Q99666 1765 aa14.81□□□□□ -0.04
LINC00538-201ENST00000626109 NWD2Q9ULI1 1742 aa14.8□□□□□ -0.04
LINC00538-201ENST00000626109 IL13P35225 146 aa14.8□□□□□ -0.04
LINC00538-201ENST00000626109 OS9Q13438 667 aaPredicted RBP14.8□□□□□ -0.04
LINC00538-201ENST00000626109 CCDC97Q96F63 343 aaPredicted RBP14.8□□□□□ -0.04
LINC00538-201ENST00000626109 STRN4Q9NRL3 753 aa14.8□□□□□ -0.04
LINC00538-201ENST00000626109 U2SURPO15042 1029 aaKnown RBP14.8□□□□□ -0.04
LINC00538-201ENST00000626109 WDR43Q15061 677 aaKnown RBP eCLIP14.8□□□□□ -0.04
LINC00538-201ENST00000626109 FAM208AQ9UK61 1670 aaKnown RBP14.79□□□□□ -0.04
LINC00538-201ENST00000626109 WDR17Q8IZU2 1322 aa14.79□□□□□ -0.04
LINC00538-201ENST00000626109 TMTC2Q8N394 836 aa14.78□□□□□ -0.04
LINC00538-201ENST00000626109 FNBP4Q8N3X1 1017 aaPredicted RBP14.78□□□□□ -0.04
LINC00538-201ENST00000626109 SGSM3Q96HU1 749 aa14.78□□□□□ -0.04
LINC00538-201ENST00000626109 NRAPQ86VF7 1730 aa14.78□□□□□ -0.04
LINC00538-201ENST00000626109 ONECUT3O60422 494 aaPredicted RBP14.78□□□□□ -0.04
LINC00538-201ENST00000626109 TOM1L2Q6ZVM7 507 aa14.78□□□□□ -0.04
LINC00538-201ENST00000626109 NLRP2Q9NX02 1062 aa14.78□□□□□ -0.04
LINC00538-201ENST00000626109 RCAN3Q9UKA8 241 aa14.78□□□□□ -0.04
LINC00538-201ENST00000626109 AFF2P51816 1311 aa14.77□□□□□ -0.04
LINC00538-201ENST00000626109 U2AF1L5P0DN76 240 aaPredicted RBP14.77□□□□□ -0.04
LINC00538-201ENST00000626109 RRP1P56182 461 aaKnown RBP14.77□□□□□ -0.04
LINC00538-201ENST00000626109 U2AF1Q01081 240 aaKnown RBP eCLIP14.77□□□□□ -0.04
LINC00538-201ENST00000626109 UNC5CLQ8IV45 518 aa14.77□□□□□ -0.04
LINC00538-201ENST00000626109 MYH16Q9H6N6 1097 aa14.77□□□□□ -0.04
LINC00538-201ENST00000626109 USP21Q9UK80 565 aa14.77□□□□□ -0.04
LINC00538-201ENST00000626109 LARP1Q6PKG0 1096 aaKnown RBP14.76□□□□□ -0.05
LINC00538-201ENST00000626109 EYA1Q99502 592 aa14.76□□□□□ -0.05
LINC00538-201ENST00000626109 CRB1P82279 1406 aa14.76□□□□□ -0.05
LINC00538-201ENST00000626109 IGSF1Q8N6C5 1336 aa14.76□□□□□ -0.05
LINC00538-201ENST00000626109 FOXD4L6Q3SYB3 417 aaPredicted RBP14.76□□□□□ -0.05
LINC00538-201ENST00000626109 FOXD4L3Q6VB84 417 aaPredicted RBP14.76□□□□□ -0.05
LINC00538-201ENST00000626109 RGPD1P0DJD0 1748 aa14.76□□□□□ -0.05
LINC00538-201ENST00000626109 BCL9LQ86UU0 1499 aa14.75□□□□□ -0.05
LINC00538-201ENST00000626109 ANKRD62A6NC57 917 aa14.75□□□□□ -0.05
LINC00538-201ENST00000626109 NBPF6Q5VWK0 638 aa14.75□□□□□ -0.05
LINC00538-201ENST00000626109 NBPF4Q96M43 638 aa14.75□□□□□ -0.05
LINC00538-201ENST00000626109 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.75□□□□□ -0.05
LINC00538-201ENST00000626109 KCNG1Q9UIX4 513 aa14.75□□□□□ -0.05
LINC00538-201ENST00000626109 PPME1Q9Y570 386 aa14.75□□□□□ -0.05
LINC00538-201ENST00000626109 RNF216Q9NWF9 866 aaPredicted RBP14.74□□□□□ -0.05
LINC00538-201ENST00000626109 SERPINA10Q9UK55 444 aa14.74□□□□□ -0.05
LINC00538-201ENST00000626109 SULT6B1Q6IMI4 303 aa14.74□□□□□ -0.05
LINC00538-201ENST00000626109 USHBP1Q8N6Y0 703 aa14.74□□□□□ -0.05
LINC00538-201ENST00000626109 CARD10Q9BWT7 1032 aa14.74□□□□□ -0.05
LINC00538-201ENST00000626109 HMOX1P09601 288 aa14.73□□□□□ -0.05
LINC00538-201ENST00000626109 FAM117AQ9C073 453 aa14.73□□□□□ -0.05
LINC00538-201ENST00000626109 ARIH1Q9Y4X5 557 aaPredicted RBP14.73□□□□□ -0.05
LINC00538-201ENST00000626109 NCAPD2Q15021 1401 aa14.73□□□□□ -0.05
LINC00538-201ENST00000626109 RGPD2P0DJD1 1756 aa14.72□□□□□ -0.05
LINC00538-201ENST00000626109 VPS72Q15906 364 aa14.72□□□□□ -0.05
LINC00538-201ENST00000626109 SPTY2D1Q68D10 685 aaPredicted RBP14.72□□□□□ -0.05
LINC00538-201ENST00000626109 ADAMTS8Q9UP79 889 aa14.72□□□□□ -0.05
LINC00538-201ENST00000626109 KDRP35968 1356 aa14.72□□□□□ -0.05
LINC00538-201ENST00000626109 TPD52L2O43399 206 aaKnown RBP14.72□□□□□ -0.05
LINC00538-201ENST00000626109 PNNQ9H307 717 aaKnown RBP14.72□□□□□ -0.05
LINC00538-201ENST00000626109 RBM27Q9P2N5 1060 aaKnown RBP14.72□□□□□ -0.05
LINC00538-201ENST00000626109 FCHSD2O94868 740 aa14.71□□□□□ -0.05
LINC00538-201ENST00000626109 DEKP35659 375 aaKnown RBP14.71□□□□□ -0.05
LINC00538-201ENST00000626109 ANP32AP39687 249 aaKnown RBP14.71□□□□□ -0.05
LINC00538-201ENST00000626109 ZNF772Q68DY9 489 aaPredicted RBP14.71□□□□□ -0.05
LINC00538-201ENST00000626109 TRPC5Q9UL62 973 aaPredicted RBP14.71□□□□□ -0.05
LINC00538-201ENST00000626109 NEFMP07197 916 aa14.7□□□□□ -0.06
LINC00538-201ENST00000626109 SPATA31A1Q5TZJ5 1347 aa14.7□□□□□ -0.06
LINC00538-201ENST00000626109 SPATA31A5Q5VU36 1347 aa14.7□□□□□ -0.06
LINC00538-201ENST00000626109 SPATA31A7Q8IWB4 1347 aa14.7□□□□□ -0.06
LINC00538-201ENST00000626109 TCP11L2Q8N4U5 519 aa14.7□□□□□ -0.06
LINC00538-201ENST00000626109 RAPGEF4Q8WZA2 1011 aa14.7□□□□□ -0.06
LINC00538-201ENST00000626109 ATRNO75882 1429 aa14.7□□□□□ -0.06
LINC00538-201ENST00000626109 PRKAR2BP31323 418 aa14.69□□□□□ -0.06
LINC00538-201ENST00000626109 THRAP3Q9Y2W1 955 aaKnown RBP14.69□□□□□ -0.06
LINC00538-201ENST00000626109 SALL2Q9Y467 1007 aaPredicted RBP14.69□□□□□ -0.06
LINC00538-201ENST00000626109 MAPK8IP3Q9UPT6 1336 aa14.68□□□□□ -0.06
LINC00538-201ENST00000626109 ZC3H4Q9UPT8 1303 aaKnown RBP14.68□□□□□ -0.06
LINC00538-201ENST00000626109 SENP3-EIF4A1A0A087X0R7 540 aa14.68□□□□□ -0.06
LINC00538-201ENST00000626109 TCERG1O14776 1098 aaKnown RBP14.68□□□□□ -0.06
LINC00538-201ENST00000626109 SEMA3EO15041 775 aa14.68□□□□□ -0.06
LINC00538-201ENST00000626109 PTMAP06454 111 aaKnown RBP14.68□□□□□ -0.06
LINC00538-201ENST00000626109 TATP17735 454 aaPredicted RBP14.68□□□□□ -0.06
LINC00538-201ENST00000626109 QTRT2Q9H974 415 aaKnown RBP14.68□□□□□ -0.06
LINC00538-201ENST00000626109 IL2RBP14784 551 aa14.67□□□□□ -0.06
LINC00538-201ENST00000626109 CCDC146Q8IYE0 955 aa14.67□□□□□ -0.06
LINC00538-201ENST00000626109 RUNDC1Q96C34 613 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms