RNA–Protein interactions for RNA: ENST00000620463.1

COL1A2-213, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL1A2, Length 4,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-213ENST00000620463 TRIM27P14373 513 aa15.36■□□□□ 0.05
COL1A2-213ENST00000620463 PRKAR2BP31323 418 aa15.36■□□□□ 0.05
COL1A2-213ENST00000620463 GBP6Q6ZN66 633 aa15.36■□□□□ 0.05
COL1A2-213ENST00000620463 NUTM2FA1L443 756 aa15.35■□□□□ 0.05
COL1A2-213ENST00000620463 SMARCA5O60264 1052 aaPredicted RBP15.35■□□□□ 0.05
COL1A2-213ENST00000620463 LARP6Q9BRS8 491 aaKnown RBP15.35■□□□□ 0.05
COL1A2-213ENST00000620463 VPS18Q9P253 973 aa15.35■□□□□ 0.05
COL1A2-213ENST00000620463 TSPYL4Q9UJ04 414 aa15.35■□□□□ 0.05
COL1A2-213ENST00000620463 PEG3Q9GZU2 1588 aa15.35■□□□□ 0.05
COL1A2-213ENST00000620463 RPAP2Q8IXW5 612 aaPredicted RBP15.35■□□□□ 0.05
COL1A2-213ENST00000620463 CWC27Q6UX04 472 aaKnown RBP15.35■□□□□ 0.05
COL1A2-213ENST00000620463 ERO1AQ96HE7 468 aa15.35■□□□□ 0.05
COL1A2-213ENST00000620463 NAIPQ13075 1403 aa15.35■□□□□ 0.05
COL1A2-213ENST00000620463 LRRFIP1Q32MZ4 808 aaKnown RBP15.35■□□□□ 0.05
COL1A2-213ENST00000620463 CNPY2Q9Y2B0 182 aa15.35■□□□□ 0.05
COL1A2-213ENST00000620463 ANO6Q4KMQ2 910 aa15.34■□□□□ 0.05
COL1A2-213ENST00000620463 TAX1BP1Q86VP1 789 aa15.34■□□□□ 0.05
COL1A2-213ENST00000620463 MARCH6O60337 910 aa15.34■□□□□ 0.05
COL1A2-213ENST00000620463 DACH1Q9UI36 760 aa15.34■□□□□ 0.05
COL1A2-213ENST00000620463 PHACTR2O75167 634 aa15.34■□□□□ 0.05
COL1A2-213ENST00000620463 LTV1Q96GA3 475 aaPredicted RBP15.34■□□□□ 0.05
COL1A2-213ENST00000620463 MYCBPQ99417 103 aaPredicted RBP15.34■□□□□ 0.05
COL1A2-213ENST00000620463 SRRTQ9BXP5 876 aaKnown RBP15.34■□□□□ 0.05
COL1A2-213ENST00000620463 KDM2BQ8NHM5 1336 aa15.34■□□□□ 0.05
COL1A2-213ENST00000620463 MCM3P25205 808 aa15.33■□□□□ 0.05
COL1A2-213ENST00000620463 ZGPATQ8N5A5 531 aaKnown RBP15.33■□□□□ 0.05
COL1A2-213ENST00000620463 CCDC12Q8WUD4 166 aaPredicted RBP15.33■□□□□ 0.05
COL1A2-213ENST00000620463 RAI14Q9P0K7 980 aa15.33■□□□□ 0.05
COL1A2-213ENST00000620463 MYO6Q9UM54 1294 aa15.33■□□□□ 0.05
COL1A2-213ENST00000620463 TOPBP1Q92547 1522 aa15.33■□□□□ 0.05
COL1A2-213ENST00000620463 KIAA1107Q9UPP5 1409 aa15.33■□□□□ 0.05
COL1A2-213ENST00000620463 MAPKBP1O60336 1514 aa15.33■□□□□ 0.04
COL1A2-213ENST00000620463 CAVIN2O95810 425 aa15.33■□□□□ 0.04
COL1A2-213ENST00000620463 CEP57Q86XR8 500 aa15.33■□□□□ 0.04
COL1A2-213ENST00000620463 LIMCH1Q9UPQ0 1083 aa15.33■□□□□ 0.04
COL1A2-213ENST00000620463 EBAG9O00559 213 aa15.33■□□□□ 0.04
COL1A2-213ENST00000620463 LIG1P18858 919 aa15.33■□□□□ 0.04
COL1A2-213ENST00000620463 RBM33Q96EV2 1170 aaKnown RBP15.33■□□□□ 0.04
COL1A2-213ENST00000620463 CTAGE5O15320 804 aa15.33■□□□□ 0.04
COL1A2-213ENST00000620463 SRCIN1Q9C0H9 1055 aa15.33■□□□□ 0.04
COL1A2-213ENST00000620463 EXOC6BQ9Y2D4 811 aa15.33■□□□□ 0.04
COL1A2-213ENST00000620463 ELF2Q15723 593 aa15.32■□□□□ 0.04
COL1A2-213ENST00000620463 STX1AQ16623 288 aa15.32■□□□□ 0.04
COL1A2-213ENST00000620463 MINK1Q8N4C8 1332 aaPredicted RBP15.32■□□□□ 0.04
COL1A2-213ENST00000620463 CCDC150Q8NCX0 1101 aa15.32■□□□□ 0.04
COL1A2-213ENST00000620463 IL1RAPL2Q9NP60 686 aa15.32■□□□□ 0.04
COL1A2-213ENST00000620463 PRG4Q92954 1404 aaPredicted RBP15.32■□□□□ 0.04
COL1A2-213ENST00000620463 SCAPERQ9BY12 1400 aa15.32■□□□□ 0.04
COL1A2-213ENST00000620463 NCBP3Q53F19 620 aaKnown RBP15.32■□□□□ 0.04
COL1A2-213ENST00000620463 DDX54Q8TDD1 881 aaKnown RBP15.32■□□□□ 0.04
COL1A2-213ENST00000620463 ERBINQ96RT1 1412 aa15.32■□□□□ 0.04
COL1A2-213ENST00000620463 HIP1O00291 1037 aa15.31■□□□□ 0.04
COL1A2-213ENST00000620463 PIP4K2AP48426 406 aaPredicted RBP15.31■□□□□ 0.04
COL1A2-213ENST00000620463 ZRSR2Q15696 482 aaKnown RBP15.31■□□□□ 0.04
COL1A2-213ENST00000620463 AFAP1Q8N556 730 aa15.31■□□□□ 0.04
COL1A2-213ENST00000620463 POLA1P09884 1462 aaPredicted RBP15.31■□□□□ 0.04
COL1A2-213ENST00000620463 GOLGA6L9A6NEM1 432 aa15.31■□□□□ 0.04
COL1A2-213ENST00000620463 CSB-PGBD3P0DP91 1061 aa15.31■□□□□ 0.04
COL1A2-213ENST00000620463 SARNPP82979 210 aaKnown RBP15.31■□□□□ 0.04
COL1A2-213ENST00000620463 SYT10Q6XYQ8 523 aa15.31■□□□□ 0.04
COL1A2-213ENST00000620463 STK11IPQ8N1F8 1099 aa15.31■□□□□ 0.04
COL1A2-213ENST00000620463 HDAC1Q13547 482 aaPredicted RBP15.3■□□□□ 0.04
COL1A2-213ENST00000620463 RNF216Q9NWF9 866 aaPredicted RBP15.3■□□□□ 0.04
COL1A2-213ENST00000620463 ZSCAN22P10073 491 aaPredicted RBP15.3■□□□□ 0.04
COL1A2-213ENST00000620463 MEX3CQ5U5Q3 659 aaKnown RBP15.3■□□□□ 0.04
COL1A2-213ENST00000620463 LUZP1Q86V48 1076 aa15.3■□□□□ 0.04
COL1A2-213ENST00000620463 DHX16O60231 1041 aaKnown RBP15.3■□□□□ 0.04
COL1A2-213ENST00000620463 ERLIN2O94905 339 aa15.3■□□□□ 0.04
COL1A2-213ENST00000620463 EZRP15311 586 aaKnown RBP15.3■□□□□ 0.04
COL1A2-213ENST00000620463 SSR1P43307 286 aaKnown RBP15.3■□□□□ 0.04
COL1A2-213ENST00000620463 KIAA1328Q86T90 577 aa15.3■□□□□ 0.04
COL1A2-213ENST00000620463 ZNF428Q96B54 188 aa15.3■□□□□ 0.04
COL1A2-213ENST00000620463 SH2B1Q9NRF2 756 aaPredicted RBP15.3■□□□□ 0.04
COL1A2-213ENST00000620463 IFT140Q96RY7 1462 aa15.3■□□□□ 0.04
COL1A2-213ENST00000620463 CCDC69A6NI79 296 aa15.29■□□□□ 0.04
COL1A2-213ENST00000620463 NUCB1Q02818 461 aa15.29■□□□□ 0.04
COL1A2-213ENST00000620463 DNAJC25Q9H1X3 360 aa15.29■□□□□ 0.04
COL1A2-213ENST00000620463 PRDM2Q13029 1718 aa15.29■□□□□ 0.04
COL1A2-213ENST00000620463 SLC4A2P04920 1241 aa15.29■□□□□ 0.04
COL1A2-213ENST00000620463 NEXNQ0ZGT2 675 aa15.29■□□□□ 0.04
COL1A2-213ENST00000620463 TROQ12816 1431 aaPredicted RBP15.29■□□□□ 0.04
COL1A2-213ENST00000620463 ERBB4Q15303 1308 aa15.29■□□□□ 0.04
COL1A2-213ENST00000620463 BIN1O00499 593 aa15.29■□□□□ 0.04
COL1A2-213ENST00000620463 GJB2P29033 226 aa15.29■□□□□ 0.04
COL1A2-213ENST00000620463 ZSCAN26Q16670 478 aa15.29■□□□□ 0.04
COL1A2-213ENST00000620463 MAGEC2Q9UBF1 373 aaPredicted RBP15.29■□□□□ 0.04
COL1A2-213ENST00000620463 NBPF11Q86T75 865 aa15.29■□□□□ 0.04
COL1A2-213ENST00000620463 PPM1EQ8WY54 764 aa15.29■□□□□ 0.04
COL1A2-213ENST00000620463 TYRO3Q06418 890 aa15.28■□□□□ 0.04
COL1A2-213ENST00000620463 MAP2K2P36507 400 aa15.28■□□□□ 0.04
COL1A2-213ENST00000620463 SLC12A5Q9H2X9 1139 aa15.28■□□□□ 0.04
COL1A2-213ENST00000620463 SYNJ2O15056 1496 aa15.28■□□□□ 0.04
COL1A2-213ENST00000620463 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.28■□□□□ 0.04
COL1A2-213ENST00000620463 DACT1Q9NYF0 836 aa15.28■□□□□ 0.04
COL1A2-213ENST00000620463 ATP2C2O75185 946 aa15.27■□□□□ 0.04
COL1A2-213ENST00000620463 OTUD6BQ8N6M0 293 aa15.27■□□□□ 0.04
COL1A2-213ENST00000620463 CPLX3Q8WVH0 158 aa15.27■□□□□ 0.04
COL1A2-213ENST00000620463 PRPF40BQ6NWY9 871 aaKnown RBP15.27■□□□□ 0.03
COL1A2-213ENST00000620463 FSIP1Q8NA03 581 aa15.27■□□□□ 0.03
COL1A2-213ENST00000620463 TMPOP42166 694 aaKnown RBP15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 157.1 ms